Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04] 48,067 sequences; 123,674,749 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq19922 183 4e-40 >seq19922 Length=1369 Score = 183 bits (202), Expect = 4e-40 Identities = 338/487 (69%), Gaps = 8/487 (2%) Strand=Plus/Plus Query 1455793 AAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCTCGGCGCCGACACGGTCC 1455852 |||||||||| || || || ||||||| ||||| || || || | |||| | | Sbjct 680 AAAAGGCCGAAGCTTCATTCTGGACCGTGGAGGAAGTGGATCTATCCAAGGACATGACCG 739 Query 1455853 ACTGGGTGTCG-CTGAGCGACGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTT 1455911 |||||| ||| || | ||| | ||||| || ||||| || || | || || ||| Sbjct 740 ACTGGGC-TCGACTAACAGACAATGAGCGTCACTTCATTTCACATGTTTTGGCTTTCTTT 798 Query 1455912 CGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCA 1455971 |||||| || ||||| || ||||| || | || ||||| | | || || || Sbjct 799 -GCCGCCTCTGACGGCATTGTTAATGAGAATCTTGTCGAGCGCTTCAGCCAGGAAGTGCA 857 Query 1455972 ATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGA 1456031 | | |||||||||||| ||||| || |||||||| ||||| || || ||||||| || Sbjct 858 AATCACAGAGGCACGTTGCTTTTATGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGA 917 Query 1456032 AACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTCGAGAAGGACCACCTCTT 1456091 || ||| | || |||||||| ||| | ||| ||| || ||| ||||||| Sbjct 918 AATGTACAGCGTGCTCATCGACACTTACATTCGGGATCCGCATCAGCGCGACTACCTCTT 977 Query 1456092 TCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGAT 1456151 ||||| || ||| |||| | |||| | ||||| || ||||| || ||||| Sbjct 978 CAATGCCATTGAAACGATGCCCGCTGTGAAGCGTAAGGCAGATTGGGCTCTGTCTTGGAT 1037 Query 1456152 CAACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCGGCTTTGCCGC-GTCGAGGGC 1456210 | | | ||| | | |||||| |||||| || | | |||||| || ||||| ||| Sbjct 1038 CTCCTCGAAGG--CGGCAAACTTTGGCGAGCGCATCATTGCCTTTGCTGCTGTCGAAGGC 1095 Query 1456211 ATCTTTTTCTCGGGCAGTTTCTGCG-CCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCC 1456269 ||||| ||| |||||||| |||| | ||||| ||||| |||||||| || || ||||| Sbjct 1096 ATCTTCTTCAGCGGCAGTTT-TGCGTCGATCTTCTGGCTGAAGAAGCGTGGTCTTATGCC 1154 Query 1456270 CGGTCTT 1456276 ||||||| Sbjct 1155 CGGTCTT 1161 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7173175049502854