Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04] 48,067 sequences; 123,674,749 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq42801 161 1e-34 seq2144 123 3e-23 seq7704 118 1e-21 seq2274 104 2e-17 seq355 87.8 2e-12 >seq42801 Length=1186 Score = 161 bits (178), Expect = 1e-34 Identities = 369/549 (67%), Gaps = 15/549 (3%) Strand=Plus/Plus Query 104994 GACTTGGAAATTCTTCGATGGCGTCGACATCGATTGGGAGTTTCCGGGCGGCAAAGGCGC 105053 ||| ||||| |||||||| ||||| || ||||| ||||| || ||||||||||||||||| Sbjct 25 GACCTGGAAGTTCTTCGACGGCGTGGATATCGACTGGGAATTCCCGGGCGGCAAAGGCGC 84 Query 105054 CAACCCCAATCAAGGCGACGCGAAACGCGATGCTCTCACGTACGTGTCTCTTTTGAAAGA 105113 |||||| |||| ||| | | | || | || || ||| || ||||||| Sbjct 85 CAACCCGAATCTGGGCAGCCCTCAGGACGGGGAA---ACTTATGTGCTGCTGATGAAAGA 141 Query 105114 GTTGCGTTCGATGCTCGACGATTTGCAAAAACAAACCAATCGCTCCGAGCGTTTGTTGCT 105173 |||| ||||||| || | || ||||| ||| || || ||| Sbjct 142 ACTGCGGGCGATGCTGGATCAGCTGTCGGCGGAAACCGGCCGCAA-----GTATGA-GCT 195 Query 105174 CACCAGCGCCATCAGCGCGGGCGACGACAAGATCGCCGTGGTGGATTACGGTCACGCTCA 105233 ||| |||||||||||| ||| | |||||||||| | ||||| ||| ||| || Sbjct 196 GACCTCCGCCATCAGCGCCGGCAAGGACAAGATCGACAAGGTGGCATACAACGTCGCGCA 255 Query 105234 AACCTACTTGGATTTGATATTTTTGATGAGTTACGATTTTAAAGGCGCCTGGTCCAAC-- 105291 | || ||| | || || ||||||| ||||| || | ||||||| || | | Sbjct 256 GATCTCGATGGTTCACATCTTCCTGATGAGCTACGACTTCTACGGCGCCT--TCGATCTG 313 Query 105292 ACAAATCTCGGTCATCAGACGGCGTTGTACGCACCCGCGTGGAAACCCAACGAACGC-TA 105350 | ||| || || |||||||| ||| || | || || || ||||||| || | ||| || Sbjct 314 AAAAACCTGGGGCATCAGACCGCGCTGAATGCGCCGGCCGGGAAACCGGAC-ACCGCCTA 372 Query 105351 CACCACCGATTACGCCGTGAACGCTCTGTTGAAACAGAACGTGCTGCCCCGCAAAATTGT 105410 |||||| | ||| |||||| || ||| || ||| ||| ||| |||| || || Sbjct 373 CACCACGGTGAACGGCGTGAATGCGCTGCTGGCGCAGGGCGTCAAGCCGGGCAAGATCGT 432 Query 105411 TGTTGGCGTGGCGATGTACGGCCGCGGTTGGATCGGCGTCACCGATTTCCCGGACGACGA 105470 || ||| || ||||| ||||||||||||| ||| || | || | || | || || Sbjct 433 CGTCGGCACCGCCATGTATGGCCGCGGTTGGACCGGGGTGAACGGCTACCAGAACAACAT 492 Query 105471 TCCGTTCGGCGGAACGGCGCGCGGTCCCGCCGTCGGCACTTGGGAAGATGGCGTTGTCGA 105530 ||||||| ||| || || ||| || | | ||||| ||||| | ||| | || || Sbjct 493 TCCGTTCACCGGCACCGCCACCGGGCCGGTCAAAGGCACCTGGGAGAACGGCATCGTGGA 552 Query 105531 TTACCGTCA 105539 ||||| || Sbjct 553 CTACCGCCA 561 >seq2144 Length=13752 Score = 123 bits (136), Expect = 3e-23 Identities = 434/665 (65%), Gaps = 12/665 (2%) Strand=Plus/Plus Query 8659 GAAACGGTGTATTACGGCGCATTAGAAGCCAGCTGTCAACTTGCCCGAGAATTG-GGCAC 8717 ||||| | || || |||||||| |||||||||||| | || || ||||| ||||| Sbjct 4267 GAAACCATTTACTATGGCGCATTGGAAGCCAGCTGTGAGCTGGCT-GAGAAAGATGGCAC 4325 Query 8718 GTACGAATCGTACGCGGGCAGCCCTGCCAGCCGCGGAATATTGCAATACGACATGTGGAA 8777 ||| || | || | ||| || || | ||| || || | || || || |||||||| Sbjct 4326 GTATGAGACCTATGAGGGAAGTCCAGTTAGCAAGGGTATTCTCCAGTATGATATGTGGAA 4385 Query 8778 TGTCACGCCCACCTCTTTGTGGAATTGGAGCGATTTGAAACGCAAAATTGCTCAATT-CG 8836 | ||||| | | ||| | ||| |||| || | || | ||| || Sbjct 4386 TAAGGTACCCACAAATCTCTGGGACTGG-GCGAAACTCAAGGAGAAGATAAGCAAGCACG 4444 Query 8837 GTTTGCGCAATTCGCTGTTGGTGGCTTACATGCCCACCGCCACGACTGCTCAAATAATGG 8896 | |||| ||||| ||| | | || ||||| || || |||| || || ||||||| Sbjct 4445 GAGTGCGTAATTCTCTGCTTATCGCACCAATGCCAACGGCATCGACAGCCCAGATAATGG 4504 Query 8897 GAAACAACGAATCCTTTGAGCCGTTCACCAACAACGTGTACGTGAGACGAGTGTTGGCCG 8956 | || || ||||| || || || | ||| ||| | ||| ||||||||| || | | Sbjct 4505 GTAATAATGAATCTTTCGAACCCTACACTTCAAACATCTACACAAGACGAGTGCTGTCTG 4564 Query 8957 GCGATTTTTTAATGCTGAATCGTCATTTGATGCGCGACTTGATCGAAGCGGGCGTTTACG 9016 | || ||| | |||||| ||||||| |||| || | | |||| || | | | | Sbjct 4565 GAGAGTTTCAGGTTGTGAATCATCATTTGTTGCGTGATCTAACCGAACTGGACTTGTGGG 4624 Query 9017 ACGACAAAATGCGCGATGCCATCGTGG-AAGCCAACGGCAGCGTTCAGAACATTGACGCG 9075 | || | ||| || || | | ||| | ||| | | || ||||| || Sbjct 4625 ATGATGATATGAAAAATCAAATAATCGCAAGTCGT-GGCTCCATACAAAACATCGAAAAC 4683 Query 9076 GTGCCTCAACACATTAAAGAGCTGTATAAAACCGTTTGGGAAAT-GAAGCAAAGCACGCT 9134 | |||||| | | || || ||||| |||||||||||||| | |||| | | Sbjct 4684 ATTCCTCAAAATGTGCGTGAACTATATAAGACCGTTTGGGAAATATCCGTAAAGTCCAC- 4742 Query 9135 GATCGGCATGGCTGCGGATAGAGGCGCTTTTATTGATCAGAGTCAATCTTTTAACGTGTT 9194 ||| ||||| || ||| | || ||||| |||||||| |||||||| ||||| | || Sbjct 4743 AATCAAAATGGCAGCAGATCGTGGAGCTTTCATTGATCAAAGTCAATCCTTTAA--TATT 4800 Query 9195 C--GTAGCCGCACCAACTTACGCTTTGATGTCCAGCATTCATTATTTAACTTGGAAAATG 9252 | ||||| | ||||| ||| | | | || | |||||||| || | |||||| | Sbjct 4801 CATGTAGCTGAACCAAATTATGGTAAGCTGACATCCATTCATTTCTTCTCCTGGAAAGCG 4860 Query 9253 GGTTTAAAAACAGGCATGTACTATTTGCGCACAAAACCCGCCGCTGAACCTATCAAATTT 9312 ||| | |||||||| ||||| ||| | ||||| || || || || | |||| | ||| Sbjct 4861 GGTCTTAAAACAGGAATGTATTATCTTCGCACTAAGCCGGCAGCCAATGCTATTCAGTTT 4920 Query 9313 ACAGT 9317 || || Sbjct 4921 ACTGT 4925 >seq7704 Length=29863 Score = 118 bits (130), Expect = 1e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||| | ||| | || || || || ||||||||||| ||| | ||| | Sbjct 18567 AGGCGGAGCACCAAGTGCAATGTTGACTCTTTCTGAATGTTGTAATCGGAGAGAGTGCGG 18508 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || | || ||||| ||||| ||||||||||||||||| || || || |||||| Sbjct 18507 CCATCTTCCAATTGCTTGCCAGCAAAGATCAAACGCTGCTGATCTGGAGGAATTCCTTCT 18448 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || ||||| || |||||| || | || || |||| ||| || || ||||| Sbjct 18447 TTGTCCTGAATCTTGGCTTTGACATTTTCGATGGTATCCGACGGTTCGACCTCAAGAGTG 18388 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| ||||| || | ||||||||||| || ||||| Sbjct 18387 ATGGTCTTACCCGTGAGGGTTTTAACGAAGATCTGCAT 18350 >seq2274 Length=37031 Score = 104 bits (114), Expect = 2e-17 Identities = 156/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||| | ||| || || || ||||| || ||||||||||| || ||| || Sbjct 30376 AGACGGAGCACCAAGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGA 30317 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || ||||| ||||| || || |||| |||||||||||| || || || || || Sbjct 30316 CCATCCTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGAATACCCTCC 30257 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || || || ||||| || | || || || | ||||| || | || Sbjct 30256 TTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTATCAGATGGCTCCACCTCCAAGGTG 30197 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 ||||| || || || || || || |||||||| ||||||||| Sbjct 30196 ATGGTCTTGCCAGTCAAGGTCTTGACGAAAATCTGCATTTTG 30155 >seq355 Length=9390 Score = 87.8 bits (96), Expect = 2e-12 Identities = 114/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 134559 TCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTT 134618 || || ||||| || || || ||||| | |||||||||||| || || || || || || Sbjct 9357 TCCTCCAGCTGCTTTCCGGCGAAAATGAGACGCTGCTGATCTGGGGGGATACCCTCCTTG 9298 Query 134619 TCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATG 134678 ||||| ||||| || || || | |||||||| | ||| || || | ||| ||| Sbjct 9297 TCTTGGATTTTAGCCTTCACATTCTCAATGGTGTCGGAAGGTTCAACTTCCAAAGTGATG 9238 Query 134679 GTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716 || || || || || ||||| || || || |||||||| Sbjct 9237 GTCTTGCCAGTCAATGTTTTCACAAAGATCTGCATTTT 9200 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505094737688840