Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq42801 161 1e-34
seq2144 123 3e-23
seq7704 118 1e-21
seq2274 104 2e-17
seq355 87.8 2e-12
>seq42801
Length=1186
Score = 161 bits (178), Expect = 1e-34
Identities = 369/549 (67%), Gaps = 15/549 (3%)
Strand=Plus/Plus
Query 104994 GACTTGGAAATTCTTCGATGGCGTCGACATCGATTGGGAGTTTCCGGGCGGCAAAGGCGC 105053
||| ||||| |||||||| ||||| || ||||| ||||| || |||||||||||||||||
Sbjct 25 GACCTGGAAGTTCTTCGACGGCGTGGATATCGACTGGGAATTCCCGGGCGGCAAAGGCGC 84
Query 105054 CAACCCCAATCAAGGCGACGCGAAACGCGATGCTCTCACGTACGTGTCTCTTTTGAAAGA 105113
|||||| |||| ||| | | | || | || || ||| || |||||||
Sbjct 85 CAACCCGAATCTGGGCAGCCCTCAGGACGGGGAA---ACTTATGTGCTGCTGATGAAAGA 141
Query 105114 GTTGCGTTCGATGCTCGACGATTTGCAAAAACAAACCAATCGCTCCGAGCGTTTGTTGCT 105173
|||| ||||||| || | || ||||| ||| || || |||
Sbjct 142 ACTGCGGGCGATGCTGGATCAGCTGTCGGCGGAAACCGGCCGCAA-----GTATGA-GCT 195
Query 105174 CACCAGCGCCATCAGCGCGGGCGACGACAAGATCGCCGTGGTGGATTACGGTCACGCTCA 105233
||| |||||||||||| ||| | |||||||||| | ||||| ||| ||| ||
Sbjct 196 GACCTCCGCCATCAGCGCCGGCAAGGACAAGATCGACAAGGTGGCATACAACGTCGCGCA 255
Query 105234 AACCTACTTGGATTTGATATTTTTGATGAGTTACGATTTTAAAGGCGCCTGGTCCAAC-- 105291
| || ||| | || || ||||||| ||||| || | ||||||| || | |
Sbjct 256 GATCTCGATGGTTCACATCTTCCTGATGAGCTACGACTTCTACGGCGCCT--TCGATCTG 313
Query 105292 ACAAATCTCGGTCATCAGACGGCGTTGTACGCACCCGCGTGGAAACCCAACGAACGC-TA 105350
| ||| || || |||||||| ||| || | || || || ||||||| || | ||| ||
Sbjct 314 AAAAACCTGGGGCATCAGACCGCGCTGAATGCGCCGGCCGGGAAACCGGAC-ACCGCCTA 372
Query 105351 CACCACCGATTACGCCGTGAACGCTCTGTTGAAACAGAACGTGCTGCCCCGCAAAATTGT 105410
|||||| | ||| |||||| || ||| || ||| ||| ||| |||| || ||
Sbjct 373 CACCACGGTGAACGGCGTGAATGCGCTGCTGGCGCAGGGCGTCAAGCCGGGCAAGATCGT 432
Query 105411 TGTTGGCGTGGCGATGTACGGCCGCGGTTGGATCGGCGTCACCGATTTCCCGGACGACGA 105470
|| ||| || ||||| ||||||||||||| ||| || | || | || | || ||
Sbjct 433 CGTCGGCACCGCCATGTATGGCCGCGGTTGGACCGGGGTGAACGGCTACCAGAACAACAT 492
Query 105471 TCCGTTCGGCGGAACGGCGCGCGGTCCCGCCGTCGGCACTTGGGAAGATGGCGTTGTCGA 105530
||||||| ||| || || ||| || | | ||||| ||||| | ||| | || ||
Sbjct 493 TCCGTTCACCGGCACCGCCACCGGGCCGGTCAAAGGCACCTGGGAGAACGGCATCGTGGA 552
Query 105531 TTACCGTCA 105539
||||| ||
Sbjct 553 CTACCGCCA 561
>seq2144
Length=13752
Score = 123 bits (136), Expect = 3e-23
Identities = 434/665 (65%), Gaps = 12/665 (2%)
Strand=Plus/Plus
Query 8659 GAAACGGTGTATTACGGCGCATTAGAAGCCAGCTGTCAACTTGCCCGAGAATTG-GGCAC 8717
||||| | || || |||||||| |||||||||||| | || || ||||| |||||
Sbjct 4267 GAAACCATTTACTATGGCGCATTGGAAGCCAGCTGTGAGCTGGCT-GAGAAAGATGGCAC 4325
Query 8718 GTACGAATCGTACGCGGGCAGCCCTGCCAGCCGCGGAATATTGCAATACGACATGTGGAA 8777
||| || | || | ||| || || | ||| || || | || || || ||||||||
Sbjct 4326 GTATGAGACCTATGAGGGAAGTCCAGTTAGCAAGGGTATTCTCCAGTATGATATGTGGAA 4385
Query 8778 TGTCACGCCCACCTCTTTGTGGAATTGGAGCGATTTGAAACGCAAAATTGCTCAATT-CG 8836
| ||||| | | ||| | ||| |||| || | || | ||| ||
Sbjct 4386 TAAGGTACCCACAAATCTCTGGGACTGG-GCGAAACTCAAGGAGAAGATAAGCAAGCACG 4444
Query 8837 GTTTGCGCAATTCGCTGTTGGTGGCTTACATGCCCACCGCCACGACTGCTCAAATAATGG 8896
| |||| ||||| ||| | | || ||||| || || |||| || || |||||||
Sbjct 4445 GAGTGCGTAATTCTCTGCTTATCGCACCAATGCCAACGGCATCGACAGCCCAGATAATGG 4504
Query 8897 GAAACAACGAATCCTTTGAGCCGTTCACCAACAACGTGTACGTGAGACGAGTGTTGGCCG 8956
| || || ||||| || || || | ||| ||| | ||| ||||||||| || | |
Sbjct 4505 GTAATAATGAATCTTTCGAACCCTACACTTCAAACATCTACACAAGACGAGTGCTGTCTG 4564
Query 8957 GCGATTTTTTAATGCTGAATCGTCATTTGATGCGCGACTTGATCGAAGCGGGCGTTTACG 9016
| || ||| | |||||| ||||||| |||| || | | |||| || | | | |
Sbjct 4565 GAGAGTTTCAGGTTGTGAATCATCATTTGTTGCGTGATCTAACCGAACTGGACTTGTGGG 4624
Query 9017 ACGACAAAATGCGCGATGCCATCGTGG-AAGCCAACGGCAGCGTTCAGAACATTGACGCG 9075
| || | ||| || || | | ||| | ||| | | || ||||| ||
Sbjct 4625 ATGATGATATGAAAAATCAAATAATCGCAAGTCGT-GGCTCCATACAAAACATCGAAAAC 4683
Query 9076 GTGCCTCAACACATTAAAGAGCTGTATAAAACCGTTTGGGAAAT-GAAGCAAAGCACGCT 9134
| |||||| | | || || ||||| |||||||||||||| | |||| | |
Sbjct 4684 ATTCCTCAAAATGTGCGTGAACTATATAAGACCGTTTGGGAAATATCCGTAAAGTCCAC- 4742
Query 9135 GATCGGCATGGCTGCGGATAGAGGCGCTTTTATTGATCAGAGTCAATCTTTTAACGTGTT 9194
||| ||||| || ||| | || ||||| |||||||| |||||||| ||||| | ||
Sbjct 4743 AATCAAAATGGCAGCAGATCGTGGAGCTTTCATTGATCAAAGTCAATCCTTTAA--TATT 4800
Query 9195 C--GTAGCCGCACCAACTTACGCTTTGATGTCCAGCATTCATTATTTAACTTGGAAAATG 9252
| ||||| | ||||| ||| | | | || | |||||||| || | |||||| |
Sbjct 4801 CATGTAGCTGAACCAAATTATGGTAAGCTGACATCCATTCATTTCTTCTCCTGGAAAGCG 4860
Query 9253 GGTTTAAAAACAGGCATGTACTATTTGCGCACAAAACCCGCCGCTGAACCTATCAAATTT 9312
||| | |||||||| ||||| ||| | ||||| || || || || | |||| | |||
Sbjct 4861 GGTCTTAAAACAGGAATGTATTATCTTCGCACTAAGCCGGCAGCCAATGCTATTCAGTTT 4920
Query 9313 ACAGT 9317
|| ||
Sbjct 4921 ACTGT 4925
>seq7704
Length=29863
Score = 118 bits (130), Expect = 1e-21
Identities = 157/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| || | ||| | ||| | || || || || ||||||||||| ||| | ||| |
Sbjct 18567 AGGCGGAGCACCAAGTGCAATGTTGACTCTTTCTGAATGTTGTAATCGGAGAGAGTGCGG 18508
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
|| || | || ||||| ||||| ||||||||||||||||| || || || ||||||
Sbjct 18507 CCATCTTCCAATTGCTTGCCAGCAAAGATCAAACGCTGCTGATCTGGAGGAATTCCTTCT 18448
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| || ||||| || |||||| || | || || |||| ||| || || |||||
Sbjct 18447 TTGTCCTGAATCTTGGCTTTGACATTTTCGATGGTATCCGACGGTTCGACCTCAAGAGTG 18388
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| ||||| || | ||||||||||| || |||||
Sbjct 18387 ATGGTCTTACCCGTGAGGGTTTTAACGAAGATCTGCAT 18350
>seq2274
Length=37031
Score = 104 bits (114), Expect = 2e-17
Identities = 156/222 (70%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| || | ||| | ||| || || || ||||| || ||||||||||| || ||| ||
Sbjct 30376 AGACGGAGCACCAAGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGA 30317
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
|| || ||||| ||||| || || |||| |||||||||||| || || || || ||
Sbjct 30316 CCATCCTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGAATACCCTCC 30257
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| || || || || ||||| || | || || || | ||||| || | ||
Sbjct 30256 TTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTATCAGATGGCTCCACCTCCAAGGTG 30197
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717
||||| || || || || || || |||||||| |||||||||
Sbjct 30196 ATGGTCTTGCCAGTCAAGGTCTTGACGAAAATCTGCATTTTG 30155
>seq355
Length=9390
Score = 87.8 bits (96), Expect = 2e-12
Identities = 114/158 (72%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 134559 TCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTT 134618
|| || ||||| || || || ||||| | |||||||||||| || || || || || ||
Sbjct 9357 TCCTCCAGCTGCTTTCCGGCGAAAATGAGACGCTGCTGATCTGGGGGGATACCCTCCTTG 9298
Query 134619 TCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATG 134678
||||| ||||| || || || | |||||||| | ||| || || | ||| |||
Sbjct 9297 TCTTGGATTTTAGCCTTCACATTCTCAATGGTGTCGGAAGGTTCAACTTCCAAAGTGATG 9238
Query 134679 GTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716
|| || || || || ||||| || || || ||||||||
Sbjct 9237 GTCTTGCCAGTCAATGTTTTCACAAAGATCTGCATTTT 9200
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505094737688840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |