Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq2144 497 1e-135
seq19922 158 2e-33
>seq2144
Length=13752
Score = 497 bits (550), Expect = 1e-135
Identities = 1244/1877 (66%), Gaps = 12/1877 (1%)
Strand=Plus/Minus
Query 68361 ATCCTTATCCAATGTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACAT 68420
|| |||||| | ||||||||||| | || ||| || || || || ||||| |||||
Sbjct 4935 ATTCTTATCTACAGTAAACTGAATAGCATTGGCTGCCGGCTTAGTGCGAAGATAATACAT 4876
Query 68421 ACCGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACT 68480
|| ||||| ||||| |||| | ||||||| || ||| || || |||| |
Sbjct 4875 TCCTGTTTTAAGACCCGCTTTCCAGGAGAAGAAATGAATGGATGTCAGCTTACCATAATT 4816
Query 68481 TGGATCGGCTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGC 68540
||| || |||| ||||||||| | |||||||||||||| ||||||||||| | ||||||
Sbjct 4815 TGGTTCAGCTACATGAATATTAAAGGATTGACTTTGATCAATGAAAGCTCCACGATCTGC 4756
Query 68541 CGCCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGAT 68600
|||||||| || | |||| | |||||||||| |||||| | | | |
Sbjct 4755 TGCCATTTTGATTGTGGACTTTACGGATATTTCCCAAACGGTCTTATATAGTTCACGCAC 4696
Query 68601 ATCATCTGGAAGGCT--CG-TATTTTGAATGGATCCACCATCGGATATAATTATATTCTT 68657
|| | |||| | | || | ||||| ||||| |||| | | || ||| ||| ||
Sbjct 4695 ATTTTGAGGAATGTTTTCGATGTTTTGTATGGAGCCACGACTTGCGATTATTTGATTTTT 4636
Query 68658 GATCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTAACTAT 68717
|| ||||||| |||||| | || |||| | | | | | ||| |||| || |
Sbjct 4635 CATATCATCATCCCACAAGTCCAGTTCGGTTAGATCACGCAACAAATGATGATTCACAAC 4576
Query 68718 TTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGA 68777
||||| || ||||| | ||||| | ||||| || || || || ||||| | |||
Sbjct 4575 CTGAAACTCTCCAGACAGCACTCGTCTTGTGTAGATGTTTGAAGTGTAGGGTTCGAAAGA 4516
Query 68778 TTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACT 68837
||||||||| |||| || || || || ||||| |||||||| ||||| | | | |
Sbjct 4515 TTCATTATTACCCATTATCTGGGCTGTCGATGCCGTTGGCATTGGTGCGATAAGCAGAGA 4456
Query 68838 ATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAAGATCAGA 68897
||| | | || || | | || || || || || | ||| ||||| |||| |
Sbjct 4455 ATTACGCACTCCGTGCTTGCTTATCTTCTCCTTGAGTTTCGCCCAGTCCCAGAGATTTGT 4396
Query 68898 TGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCCATTATA 68957
||||| |||||| | ||| || || ||||| || || || | ||| | |||
Sbjct 4395 GGGTACCTTATTCCACATATCATACTGGAGAATACCCTTGCTAACTGGACTTCCCTCATA 4336
Query 68958 TGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCGTAATA 69017
|| ||||| | || || | ||||| || ||||| || || || ||||| || || ||
Sbjct 4335 GGTCTCATACGTGCCATCTTTCTCAGCCAGCTCACAGCTGGCTTCCAATGCGCCATAGTA 4276
Query 69018 AATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATGGATAATG 69077
||| |||||||| |||| | ||| ||| || | ||| || | ||||| |
Sbjct 4275 AATGGTTTCGAATATCTGTTGATTCAGAAGACACGCCTTATCACTCTCATAGGGATACCG 4216
Query 69078 TAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCTCTT 69137
| | ||| || |||||||| | ||| ||||| ||||| || || || | |||||| |
Sbjct 4215 CATTAAAATCAAAGCATCTGCAAGTCCTTGAACTCCAATTCCAATTGGACGATGTCT-TA 4157
Query 69138 ATTTGAACTT-TCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATT-AAGA 69195
| ||| | || | ||| || || | ||| || ||||| ||||| || || || || |||
Sbjct 4156 AGTTGGATTTCTTAGCCTCGGGCAGAGGGTAGTAATTGATATCGATGATCTTGTTCAAGT 4097
Query 69196 TTTCGGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAA--TCGTC-CATCT 69252
||| || || | || || || || || || | ||| || | || || | |
Sbjct 4096 TTTTGGTA-ACAATCTTGGTGACCTCTTTGAGCTTCACAAAGTCGTACGTCTTCTCCGGT 4038
Query 69253 ATAACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTAGAATTT 69312
| || |||||||| || |||| ||||| | ||| ||||| || | ||||| |
Sbjct 4037 GTTACGAACATATTGAGAGCTATCGATGCCAAATTGCAAACAGCAATCTCATCTGGTGCA 3978
Query 69313 GCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGCTGA 69372
| ||| | | || || || || | ||||| ||||| || || |||| |||||| ||
Sbjct 3977 GAATACTCAACAATTTCAGTGCACAAGTTACTGCATTTAATTGTGCCCACATTTTGTTGG 3918
Query 69373 TTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGA 69432
|| ||||| |||||| | |||||| | || || |||| || ||||| || | ||
Sbjct 3917 TTGCTCTTGCGGTTACACGAATCCTTGAAGAGCATGTACGGTGTGCCAGTCTCCACTTGT 3858
Query 69433 GATTCGATAATAGATTTCCAAACGACCCTAGCATTTATTACGGTCTTGTAACGCTTCTCT 69492
|| || || || | ||||| | ||| || || || || || |||
Sbjct 3857 GACTCAATGATGGCAAACCAAAGGGATTGAGCCTTGATAACACGATTTGCTCGACCCTCC 3798
Query 69493 TTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGA 69552
|| || |||| |||||| ||| || || | ||| |||||||||||| | | ||| |||
Sbjct 3797 TTCTCGTATTTTGTATAGAGCTCCTCAAACTTATCACCCCAAACATCAGCGAGTCCTGGA 3738
Query 69553 CATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGA 69612
|| | | || ||||||| |||||| | |||| | | || || |||||||| | |
Sbjct 3737 CACTTGTGCGGGCACATCAGTGACCAATCCTCATTGGCTTCCACGCGCTTCATAAACAAA 3678
Query 69613 TCGGGAATCCAAAGAGCTATA-AAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAtt 69671
|| || ||||| || || ||| || ||||| | | | || ||| || || || || ||
Sbjct 3677 TCTGGTATCCACAGGGC-ATAGAACAGATCCCGAGCACGATGTTCCTCTTTGCCAGTGTT 3619
Query 69672 ttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCAT 69731
|| |||||||| | ||||| | | ||| |||||||| || || || || || || |
Sbjct 3618 CTTCTTAAGATCCAAGAACTCAAAGACATCGGAATGCCAAGGCTCGAGGTAAATGGCAAA 3559
Query 69732 GACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCT 69791
|||| |||| ||| || |||||||| | || | || || ||| | |||||
Sbjct 3558 AGCTCCAGGTCTTTTGCCGCCACCCTGATCCACATAACGTGCCACATTGTTAAATACTCT 3499
Query 69792 CAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGC 69851
|||||| |||| | ||||| ||| ||||||| || ||| ||| || |||| | ||
Sbjct 3498 CAGCATAGGAACCAAGCCATTGGATGTACCATTGGTGCCACTAATCGAAGTTCCCTTGGC 3439
Query 69852 GCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACG 69911
||||| | | | ||||| || || ||||| || ||||| | ||||| |
Sbjct 3438 CCGAATGCAATGCACATTCAGACCAATACCACCTGCTGACTTTGAGATCATCGCACACTG 3379
Query 69912 TTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCT 69971
| || | | | | || ||||| || ||| || |||| | || ||||| ||
Sbjct 3378 CTCCACAGATTTAAAGATTCCCTCGATTGAGTCAGATACCATGGTGAGGAGAAAGCATGA 3319
Query 69972 AGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCA 70031
||||| ||| | || | ||| | || || | ||| || || || || ||||| |
Sbjct 3318 AGACAGCTGAGGGCGTGTGGTTGCAGCTGCGAAAAGTGTTGGTGAGGCATGTGTGAAGAA 3259
Query 70032 TTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATCCCACTGATGAATTCC 70091
||| ||||||| |||||| || || | || || || ||||| ||| || ||
Sbjct 3258 GCGTTCCGAAAGCAAATTGTAAGTCTCCAGTGCGGAATCAATATCATCTCCATGTATACC 3199
Query 70092 TATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAA 70151
|| || || ||||||| ||| ||||| || ||||| | ||| ||| ||||| ||
Sbjct 3198 GATGGCAACTCGCATCAGCATGTGCTGTGGACGTTCAGCAACTTTGCCATTGATTTTTAA 3139
Query 70152 CAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTA 70211
|| || ||| |||| ||| || || |||||||| || || ||| || | |||||
Sbjct 3138 CAAATACGATCGCTCCAAAGTCTTGAATCCAAAATAATTATAGCCAAAATCACGATCGTA 3079
Query 70212 AATAATAACAGAATTTA 70228
||||| |||| ||||
Sbjct 3078 TATAATGGCAGAGTTTA 3062
>seq19922
Length=1369
Score = 158 bits (174), Expect = 2e-33
Identities = 438/665 (66%), Gaps = 9/665 (1%)
Strand=Plus/Minus
Query 39493 CATTCCTATGAGTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGC 39552
||| || | ||| || ||||||||||| || || || || || | || || | || ||
Sbjct 1341 CATGCCGACGAGATTGACTGGTAGAGCGTCTGTAAGGAATTCCTGCTCTATCTTCACAGC 1282
Query 39553 CTCTGTTATTATC--GATGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAAC 39610
|| | || ||| |||| | | |||| ||| || | || | || || | |||
Sbjct 1281 ATCCGAGATGATCTCGATGATGCG--CTCACGACTGGGACGCTGTACCAAGTGCTGGAAC 1224
Query 39611 ATTAAGCAG-GCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAA 39669
|| ||||| || || || ||||| || ||||| || | || | || || || ||
Sbjct 1223 AT-AAGCACAGCAAAATCGCAATGAAGTCCCTCGTCGCGGGAGATCAGCTCATTCGAGAA 1165
Query 39670 TGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGA 39729
|| || || ||||| ||||||||||| || ||||| || || | |||||| ||
Sbjct 1164 GGTAAGACCGGGCATAAGACCACGCTTCTTCAGCCAGAAGATCGACGCAAAACTGCCGCT 1105
Query 39730 AAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATT 39789
|||||||||||||| || || ||||| |||| | | ||| || | ||| | ||
Sbjct 1104 GAAGAAGATGCCTTCGACAGCAGCAAAGGCAATGATGCGCTCGCCAAAGTTTGCCGCCTT 1045
Query 39790 --ATG-TATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTAT 39846
| | ||||| | | |||||||| || || ||| ||| ||||| ||||| ||
Sbjct 1044 CGAGGAGATCCAAGACAGAGCCCAATCTGCCTTACGCTTCACAGCGGGCATCGTTTCAAT 985
Query 39847 AGCATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACT 39906
||||| ||||| || | | || ||| || || || || || | || ||
Sbjct 984 GGCATTGAAGAGGTAGTCGCGCTGATGCGGATCCCGAATGTAAGTGTCGATGAGCACGCT 925
Query 39907 ATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTC 39966
|||||||| || |||| || || || || ||||| || || ||||| || | ||| ||
Sbjct 924 GTACATTTCCGAGTGGACATTCTCCATGGCAATCTGGAAGCCATAAAAGCAACGTGCCTC 865
Query 39967 AGTAATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACT 40026
|| ||||| || || | || | || | | ||| ||||| || || || |||
Sbjct 864 TGTGATTTGCACTTCCTGGCTGAAGCGCTCGACAAGATTCTCATTAACAATGCCGTCAGA 805
Query 40027 AGCGGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTATT 40086
|||||||| || ||||| |||||| ||| || | |||| | ||| | | |
Sbjct 804 GGCGGCAAAGAAAGCCAAAACATGTGAAATGAAGTGACGCTCATTGTCTGTTAGTCGAGC 745
Query 40087 CCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGC 40146
|||||| | || || || |||| ||| ||||| || | ||||| || || || || ||
Sbjct 744 CCAGTCGGTCATGTCCTTGGATAGATCCACTTCCTCCACGGTCCAGAATGAAGCTTCGGC 685
Query 40147 CTTTT 40151
|||||
Sbjct 684 CTTTT 680
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686496079433880
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