Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq2144 196 4e-45
seq42801 105 6e-18
seq355 96.9 3e-15
>seq2144
Length=13752
Score = 196 bits (216), Expect = 4e-45
Identities = 989/1554 (64%), Gaps = 53/1554 (3%)
Strand=Plus/Minus
Query 130406 TTTTCGACGGTGAATTGAATGGCATTGGTGGCCGGCTTGGTGCGCAAATAATACATGCCT 130465
|| || || || || ||||| ||||||| |||||||| ||||| | ||||||||| |||
Sbjct 4931 TTATCTACAGTAAACTGAATAGCATTGGCTGCCGGCTTAGTGCGAAGATAATACATTCCT 4872
Query 130466 GTTTTGAGTCCAATTTTGT--GTCCATAATTG--TGGATGCTGCACATTGTTTGGTAATT 130521
||||| || || ||| | | || || |||||| || | |||||
Sbjct 4871 GTTTTAAGACCCGCTTTCCAGGAGAAGAAATGAATGGATGT----CAGCTTACCATAATT 4816
Query 130522 GGGTTGCGCCAC--GAATATGTTGAGCGATTGCGATTGATCAATAAAAGCGCCCCTGTCT 130579
|||| || || |||||| | | ||||| ||||||||| ||||| || | |||
Sbjct 4815 TGGTTCAGCTACATGAATAT--TAAAGGATTGACTTTGATCAATGAAAGCTCCACGATCT 4758
Query 130580 GCAGCCATGTCGAGCATGGT-TTTATTTTTCATCTCCCAAGCGGTCTTGTATAGATCCCT 130638
|| ||||| | || ||| |||| | || |||||| ||||||| ||||| || |
Sbjct 4757 GCTGCCATTTTGATTGTGGACTTTACGGAT-ATTTCCCAAACGGTCTTATATAGTTCACG 4699
Query 130639 AATGTGTTTGGGTATGCGCGCAATCGATTGAACGCTACCGTTGTTGGCTATAATTTCGTT 130698
| | || || ||| | || ||| | | || | || || |||| ||
Sbjct 4698 CACATTTTGAGGAATGTTTTCGATGTTTTGTATGGAGCCACGACTTGCGATTATTTGATT 4639
Query 130699 GCGCATACTTTTATCGTACAATCCAAGCTGTACAAGATCTTTTACCAAATGATTATTAAT 130758
|||| | ||| |||| | || | ||||| | |||||||| ||| |
Sbjct 4638 TTTCATATCATCATCCCACAAGTCCAGTTCGGTTAGATCACGCAACAAATGATGATTCAC 4579
Query 130759 GATTTGAAAATCACCAGCCAGGACGCGTCTAACGTAAATGTTGCTCGTGAACGGTTCAAA 130818
| ||||| || |||| ||| || ||||| ||| ||||| ||| | ||||| ||
Sbjct 4578 AACCTGAAACTCTCCAGACAGCACTCGTCTTGTGTAGATGTTTGAAGTGTAGGGTTCGAA 4519
Query 130819 GGATTCGTTGTTGCCGAATATTTGTGCTGTAGTTGCGGTGGGCATGTATGCCACTAATAG 130878
||||| || || || | ||| || ||||| | ||| || ||||| ||| | | ||
Sbjct 4518 AGATTCATTATTACCCATTATCTGGGCTGTCGATGCCGTTGGCATTGGTGCGATAAGCAG 4459
Query 130879 AGAATTACGAAGACCGTGCGTCGTGATTTTTCGCTTCAATTCATCCCAATCCCATAGAGA 130938
||||||||| | |||||| | | || || ||| | || |||| ||||| |||
Sbjct 4458 AGAATTACGCACTCCGTGCTTGCTTATCTTCTCCTTGAGTTTCGCCCAGTCCCAGAGATT 4399
Query 130939 GGTAGGTTTGACATTGTTCCACATATCAAATTGTAGTATGCCTTTACTGGCGGGACTGGA 130998
|| ||| || || |||||||||||| | || || || || || || | |||||
Sbjct 4398 TGTGGGT---ACCTTATTCCACATATCATACTGGAGAATACCCTTGCTAACTGGACTTCC 4342
Query 130999 TTCGAACGATTCGTAGATTCCTTCGACACGAGCCAGGTCGTTGCTAGCTTCCAAAGCTCC 131058
|| | | || || | || || |||||| || ||| |||||||| || ||
Sbjct 4341 CTCATAGGTCTCATACGTGCCATCTTTCTCAGCCAGCTCACAGCTGGCTTCCAATGCGCC 4282
Query 131059 GTAATAAATGGTTTCGGCAATTTGTTTATTTAATTGTTTCGCTTGGTTGCTCTCGTAAGG 131118
|| |||||||||||| || |||| ||| | | ||| | | ||||| || ||
Sbjct 4281 ATAGTAAATGGTTTCGAATATCTGTTGATTCAGAAGACACGCCTTATCACTCTCATAGGG 4222
Query 131119 AAATTTCATTAAAATAAAAGCGTCTGCGAGACCCTGTATCCCAACGCCCACCGGTCTATG 131178
| | ||||||||| ||||| ||||| || || || | |||| || | || | |||
Sbjct 4221 ATACCGCATTAAAATCAAAGCATCTGCAAGTCCTTGAACTCCAATTCCAATTGGACGATG 4162
Query 131179 TTTTAAATTACATTT-----ACGCGAACATTCGGTGGGATAAAGGTTAATGTCAATTATT 131233
| |||| || |||| | || || ||| | ||| || || || || ||
Sbjct 4161 TCTTAAGTTGGATTTCTTAGCCTCGGGCAGAGGGTAG--TAA---TTGATATCGATGATC 4107
Query 131234 TTGTTTAAATTGCGCACTACAATTTGTGTGACGCTTTTCAATTTGTCGAAATCAAACGTG 131293
||||| || || ||||| | ||||| ||| | || | || || ||||
Sbjct 4106 TTGTTCAAGTTTTTGGTAACAATCTTGGTGACCTCTTTGAGCTTCACAAAGTCGTACGT- 4048
Query 131294 CCAGTTTCGAGGTTTACAAATTGATTTACACATATTGACGCCAGATTACAAACTGCCGTT 131353
| || | |||| || ||| | | ||| || |||| ||| ||||| || |
Sbjct 4047 --CTTCTCCGGTGTTACGAACATATTGAGAGCTATCGATGCCAAATTGCAAACAGCAATC 3990
Query 131354 TCGTCATAATCGCAATACTGAACAATTTCGGCGCACAAATTACTGCTCTTTATGGTGCCC 131413
|| || | |||||| ||||||||| | |||||| ||||||| || || ||||||
Sbjct 3989 TCATCTGGTGCAGAATACTCAACAATTTCAGTGCACAAGTTACTGCATTTAATTGTGCCC 3930
Query 131414 AAATTTTGTTGATTGCTTTTAGCATTCACATG-GTCCTTGTACATCATGTAGGGCGTGCC 131472
| ||||||||| ||||| || || | ||| | |||||| | | |||||| || |||||
Sbjct 3929 ACATTTTGTTGGTTGCTCTT-GCGGTTACACGAATCCTTGAAGAGCATGTACGGTGTGCC 3871
Query 131473 CGTTTCGACTTGAGTTTCAATAATG--TATCGAAAGAGTTTTCGAGCAGACAATTGATAT 131530
|| || ||||| | ||||| ||| | | |||| | || |||| ||||||
Sbjct 3870 AGTCTCCACTTGTGACTCAATGATGGCAAACCAAAGGGATT--GAGC-----CTTGATAA 3818
Query 131531 TTGTATTGGC-CG--CGT--TTTTCGTAATTTTCGTACAACGTTTCAAAGTTTT--GGCC 131583
||| || || | | || ||||| ||| || | | ||||| || | ||
Sbjct 3817 CACGATTTGCTCGACCCTCCTTCTCGTATTTTGTATAGAGCTCCTCAAACTTATCACCCC 3758
Query 131584 AAACGAACTGTCCAAATTGGGACATTCGCTGGGACACATTAGCGACCACACGCCGTTCTG 131643
|||| | | | | | ||||| | | || ||||| || ||||| | | ||
Sbjct 3757 AAAC-ATCAG-CGAGTCCTGGACACTTGTGCGGGCACATCAGTGACCAATCCTCATTGGC 3700
Query 131644 TTCAACTCGCTTCATAAACAAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTT 131703
||| || ||||||||||||||||| || | ||| | || || |||||||| | |||
Sbjct 3699 TTCCACGCGCTTCATAAACAAATCTGGTATCCACAGGGCATAGAACAGATCCCGAGCACG 3640
Query 131704 TTTCTCTTCTGTACCCATAAtttttttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCA 131763
| || ||| | || | | || || | || || || || || | || | ||||||
Sbjct 3639 ATGTTCCTCTTTGCCAGTGTTCTTCTTAAGATCCAAGAACTCAAAGACATCGGAATGCCA 3580
Query 131764 GGGTTCCAAATACACTGCCATTGCGCCTTTGCGCTTACCG---CCTTGATTAACATGACG 131820
|| || | || | || | || || | || ||| || |||| |||| |||
Sbjct 3579 AGGCTCGAGGTAAATGGCAAAAGCTCCAGGTCTTTTGCCGCCACCCTGATCCACATAACG 3520
Query 131821 AACCATGTTGTTGTATACGCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCT 131880
||| ||||| |||| | || ||| || |||| || |||| | ||||||||||
Sbjct 3519 TGCCACATTGTTAAATACTCTCAGCATAGGAACCAAGCCATTGGATGTACCATTGGTGCC 3460
Query 131881 CTTAATGTAGCTGCCATTGGCTCTGATTTTGTGAACGTTGAGTCCAATACCTCC 131934
|||| | | || ||||| | || || || || || |||||||| ||
Sbjct 3459 ACTAATCGAAGTTCCCTTGGCCCGAATGCAATGCACATTCAGACCAATACCACC 3406
>seq42801
Length=1186
Score = 105 bits (116), Expect = 6e-18
Identities = 235/343 (69%), Gaps = 16/343 (5%)
Strand=Plus/Minus
Query 49368 TCGCCGTTGTCGGCGTCAATTTCCCAAGCAAACAGTCCGCCCAGATTCAAATCCAGCACG 49427
||||||||||| ||||| || ||||| | || || |||||||| | | ||||| ||||
Sbjct 759 TCGCCGTTGTCCGCGTCGATCTCCCAGGAGAATAGGCCGCCCAGCTGCTTATCCAACACG 700
Query 49428 TA-TCGACTCTTGTCGACTACCGAGTCGACGCTATCGTAAC---TGATCAAGTCACCGGT 49483
|| | | || | | | | ||||| | | ||||| | |||||| || |||||
Sbjct 699 TACTTGCCTTTGGCCTGCC-CCGAGCGGGC---ATCGTCAAAGGTGATCAGATCGCCGGT 644
Query 49484 GGACGCTTTAAAAACGTACGCCGCTTTAGCGACAGTGTCGTATGTGTACTTGTATTGCGC 49543
|| | ||| || ||||| | ||||| || | |||||| ||||||| | | |||
Sbjct 643 GGTAGGTTTGAACACGTAAGGCGCTTCCGCCGTGGCGTCGTAGGTGTACTGCCACT-CGC 585
Query 49544 CGGCAACAAACTGTTTA-CAATTTGCCTGTAATCCACTACGCCGTCCTCCCAAGTGCCCA 49602
|| | ||||| | | || || | ||| ||||| | ||||| |||||| |||||
Sbjct 584 CGCTCATGAACTGGCTGGCGATCTGGCGGTAGTCCACGATGCCGTTCTCCCAGGTGCCTT 525
Query 49603 CGACAGGACCACCGGCAACGCCTGTGAACGG---GTTGTCATCTGTGTAATCGTCGACTG 49659
||| || || ||| ||| |||||||| ||||| |||| ||| ||| ||
Sbjct 524 TGACCGGCCCGGTGGCGGTGCCGGTGAACGGAATGTTGT--TCTG-GTAGCCGTTCACCC 468
Query 49660 CGGTCCAACCGCGGCCGTACATTGCCACTCCGATGACAATTTT 49702
|||||||||||||||| ||||| || |||| ||| || ||
Sbjct 467 CGGTCCAACCGCGGCCATACATGGCGGTGCCGACGACGATCTT 425
Score = 87.8 bits (96), Expect = 2e-12
Identities = 62/71 (87%), Gaps = 0/71 (0%)
Strand=Plus/Minus
Query 50031 CCCAAAATCGGGTTGGCGCCTTTGCCGCCCGGAAACTCCCAGTCAATGTCGACGCCGTCG 50090
|||| | ||||||||||||||||||||||||| || |||||||| || || |||||||||
Sbjct 99 CCCAGATTCGGGTTGGCGCCTTTGCCGCCCGGGAATTCCCAGTCGATATCCACGCCGTCG 40
Query 50091 AAAAATTTCCA 50101
|| || |||||
Sbjct 39 AAGAACTTCCA 29
>seq355
Length=9390
Score = 96.9 bits (106), Expect = 3e-15
Identities = 134/188 (71%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 27060 TTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATG 27119
|| || || |||||||| || | || | || || ||||| || |||||| |||||
Sbjct 9390 TTCTGGATGTTGTAGTCCGACAGAGTACGGCCATCCTCCAGCTGCTTTCCGGCGAAAATG 9331
Query 27120 AGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCT 27179
|||||||| ||||| || || | |||||| || || ||| || |||| | ||
Sbjct 9330 AGACGCTGCTGATCTGGGGGGATACCCTCCTTGTCTTGGATTTTAGCCTTCACATTCTCA 9271
Query 27180 ACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAG 27239
| ||||| | | ||||||||| | ||| || | ||||| |||| ||||||||||||
Sbjct 9270 ATGGTGTCGGAAGGTTCAACTTCCAAAGTGATGGTCTTGCCAGTCAATGTTTTCACAAAG 9211
Query 27240 ATTTGCAT 27247
|| |||||
Sbjct 9210 ATCTGCAT 9203
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424685466390504
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |