Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq2144 257 2e-63
>seq2144
Length=13752
Score = 257 bits (284), Expect = 2e-63
Identities = 912/1402 (65%), Gaps = 50/1402 (4%)
Strand=Plus/Minus
Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766
||||||||||| ||||| ||||| || ||||||||||||||| || || || || ||
Sbjct 4545 GTAGATGTTTGAAGTGTAGGGTTCGAAAGATTCATTATTACCCATTATCTGGGCTGTCGA 4486
Query 110767 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTC 110826
|| |||||||||||||| || | ||| ||||| | || | || | || ||
Sbjct 4485 TGCCGTTGGCATTGGTGCGATAAGCAGAGAATTACGCACTCCGTGCTTGCTTATCTTCTC 4426
Query 110827 CTTGAGAACATCCCAGTCGTAGTTGAGCT-TGGTTTCACCTTC--CCACATGTCAAACTG 110883
|||||| ||||||| || || | ||| | ||||| |||||| ||| ||||
Sbjct 4425 CTTGAGTTTCGCCCAGTCCCAGA-GATTTGTGGGT--ACCTTATTCCACATATCATACTG 4369
Query 110884 AAGCAC-CCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAG 110942
|| | |||||| | | ||| |||||| |||| ||||| | || | ||||
Sbjct 4368 GAGAATACCCTTGCTAA-CTGGACTTCCCTCATAGGTCTCATACGTGCCATCTTTCTCAG 4310
Query 110943 CCAATTCACAGCTCGCCTCCAGGGATGCGTGATAC---ATGGTTTCAAAGATACGAGCAT 110999
||| |||||||| || |||| ||||| ||| |||||||| || || | ||
Sbjct 4309 CCAGCTCACAGCTGGCTTCCA---ATGCGCCATAGTAAATGGTTTCGAATATCTGTTGAT 4253
Query 111000 TCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGA 111059
||| || | ||| ||| | | || || ||||| || |||| || |
Sbjct 4252 TCAGAAGACACGCCTTATCACTCTCATAGGGATACCGCATTAAAATCAAAGCATCTGCAA 4193
Query 111060 GACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA- 111118
| |||||||| || | ||||| || | |||| | || || || | || |||
Sbjct 4192 GTCCTTGAACTCCAATTCCAATTGGACGATGTCTTAAGTTGGATTT---CTTAGCCTCGG 4136
Query 111119 --ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGA 111176
| || || |||| | || |||| ||| | ||||||||||||||||| ||||
Sbjct 4135 GCAGAGGGTAGTAATTGATATCGATGATCTTGTTCAAGTTTTTGGTAACAATCTTGGTGA 4076
Query 111177 TTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTG------ACATACTTTG 111230
|| | || || || | || || || | ||| | || ||||| |||
Sbjct 4075 CCTCTTTGAGCTTCACAAAGTC----GTACGTCT-TCTCCGGTGTTACGAACATA--TTG 4023
Query 111231 GAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAA 111290
|| || || |||||||||||||||||||| ||||||| | | ||||| | ||
Sbjct 4022 --AGAGCTATCGATGCCAAATTGCAAACAGCAATCTCATCTGGTGCAGAATACTCAACAA 3965
Query 111291 TTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGT 111350
|||| || || ||||| | ||||| || |||| ||| | |||||| ||||| ||
Sbjct 3964 TTTCAGTGCACAAGTTACTGCATTTAATTGTGCCCACATTTTGTTGGTTGCTCTTGCGGT 3905
Query 111351 TGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAG 111410
| |||| ||||||| |||||||||| || || || |||||| ||||| | | || |
Sbjct 3904 TACACGAATCCTTGAAGAGCATGTACGGTGTGCCAGTCTCCACTTGTGACTCAATGATGG 3845
Query 111411 CCTTCCAAA--CATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTT 111468
| ||||| || | | || | | || || || || |||||| |||||| ||
Sbjct 3844 CAAACCAAAGGGAT-TGAGCCTTG-ATAACACGATTTGCTCGACCCTCCTTCTCGTATTT 3787
Query 111469 TGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGG 111528
||| ||||| | ||||||| |||||| | || | ||| ||||| ||||| ||
Sbjct 3786 TGTATAGAGCTCCTCAAACTTATCACCCCAAACATCAGCGAGTCCTGGACACTTGTGCGG 3727
Query 111529 ACAGAAAAGAGACCATTGACCACCTT--CCTCAACCCGCTTCATGAAAAGGTCTGGAATC 111586
|| | || ||||| | || | || | || || |||||||| || | ||||| |||
Sbjct 3726 GCACATCAGTGACCAAT--CCTCATTGGCTTCCACGCGCTTCATAAACAAATCTGGTATC 3669
Query 111587 CACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA- 111645
||||||| | || ||||| | | ||| || || | || ||| || |||
Sbjct 3668 CACAGGGCATAGAACAGATCCCGAGCACGATGTTCCTCTTTGCCAGTGTT-CTTCTTAAG 3610
Query 111646 CTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC--- 111702
|| | |||||| | || ||| | ||||| ||||| || || | || | || |||
Sbjct 3609 ATCCAAGAACTCAAAGACATCGGAATGCCAAGGCTCGAGGTAAATGGCAAAAGCTCCAGG 3550
Query 111703 -CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTG 111761
|||| | || ||| | |||| ||||| || || ||||||||| | ||||| |
Sbjct 3549 TCTTTTGCCG-CCACCCTGATCCACATAACGTGCCACATTGTTAAATACTCTCAGCATAG 3491
Query 111762 GAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACAT 111821
||| | |||| ||| |||||| || || | ||| || | ||||| | |
Sbjct 3490 GAACCAAGCCATTGGATGTACCATTGGTGCCACTAATCGAAGTTCCCTTGGCCCGAATGC 3431
Query 111822 CATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAG 111881
||| | | || |||||||| || || |||||||||| |||||||| | | ||
Sbjct 3430 AATGCACATTCAGACCAATACCACCTGCTGACTTTGAGATCATCGCACACTGCTCCACAG 3371
Query 111882 TTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCT 111941
| | |||| || | ||||||||| ||| || || ||||| |||| ||
Sbjct 3370 ATTTAAAGATTCCCTCGATTGAGTCAGATACCATGGTGAGGAGAAAGCATGAAGACAGCT 3311
Query 111942 GCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGG 112001
| || | || || |||| ||| || ||||||| || || |||| | | || |
Sbjct 3310 GAGGGCGTGTGGTTGCAGCTGCGAAAAGTGTTGGTGAGGCATGTGTGAAGAAGCGTTCCG 3251
Query 112002 ACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGA 112061
| | | | ||| ||||||| | |||||||| || || || || || ||||| || |
Sbjct 3250 AAAGCAAATTGTAAGTCTCCAGTGCGGAATCAATATCATCTCCATGTATACCGATGGCAA 3191
Query 112062 CCCGCATGAACATGTACTGTGG 112083
| ||||| | ||||| ||||||
Sbjct 3190 CTCGCATCAGCATGTGCTGTGG 3169
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 627654654823200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |