Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04] 48,067 sequences; 123,674,749 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq2144 257 2e-63 >seq2144 Length=13752 Score = 257 bits (284), Expect = 2e-63 Identities = 912/1402 (65%), Gaps = 50/1402 (4%) Strand=Plus/Minus Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766 ||||||||||| ||||| ||||| || ||||||||||||||| || || || || || Sbjct 4545 GTAGATGTTTGAAGTGTAGGGTTCGAAAGATTCATTATTACCCATTATCTGGGCTGTCGA 4486 Query 110767 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTC 110826 || |||||||||||||| || | ||| ||||| | || | || | || || Sbjct 4485 TGCCGTTGGCATTGGTGCGATAAGCAGAGAATTACGCACTCCGTGCTTGCTTATCTTCTC 4426 Query 110827 CTTGAGAACATCCCAGTCGTAGTTGAGCT-TGGTTTCACCTTC--CCACATGTCAAACTG 110883 |||||| ||||||| || || | ||| | ||||| |||||| ||| |||| Sbjct 4425 CTTGAGTTTCGCCCAGTCCCAGA-GATTTGTGGGT--ACCTTATTCCACATATCATACTG 4369 Query 110884 AAGCAC-CCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAG 110942 || | |||||| | | ||| |||||| |||| ||||| | || | |||| Sbjct 4368 GAGAATACCCTTGCTAA-CTGGACTTCCCTCATAGGTCTCATACGTGCCATCTTTCTCAG 4310 Query 110943 CCAATTCACAGCTCGCCTCCAGGGATGCGTGATAC---ATGGTTTCAAAGATACGAGCAT 110999 ||| |||||||| || |||| ||||| ||| |||||||| || || | || Sbjct 4309 CCAGCTCACAGCTGGCTTCCA---ATGCGCCATAGTAAATGGTTTCGAATATCTGTTGAT 4253 Query 111000 TCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGA 111059 ||| || | ||| ||| | | || || ||||| || |||| || | Sbjct 4252 TCAGAAGACACGCCTTATCACTCTCATAGGGATACCGCATTAAAATCAAAGCATCTGCAA 4193 Query 111060 GACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA- 111118 | |||||||| || | ||||| || | |||| | || || || | || ||| Sbjct 4192 GTCCTTGAACTCCAATTCCAATTGGACGATGTCTTAAGTTGGATTT---CTTAGCCTCGG 4136 Query 111119 --ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGA 111176 | || || |||| | || |||| ||| | ||||||||||||||||| |||| Sbjct 4135 GCAGAGGGTAGTAATTGATATCGATGATCTTGTTCAAGTTTTTGGTAACAATCTTGGTGA 4076 Query 111177 TTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTG------ACATACTTTG 111230 || | || || || | || || || | ||| | || ||||| ||| Sbjct 4075 CCTCTTTGAGCTTCACAAAGTC----GTACGTCT-TCTCCGGTGTTACGAACATA--TTG 4023 Query 111231 GAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAA 111290 || || || |||||||||||||||||||| ||||||| | | ||||| | || Sbjct 4022 --AGAGCTATCGATGCCAAATTGCAAACAGCAATCTCATCTGGTGCAGAATACTCAACAA 3965 Query 111291 TTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGT 111350 |||| || || ||||| | ||||| || |||| ||| | |||||| ||||| || Sbjct 3964 TTTCAGTGCACAAGTTACTGCATTTAATTGTGCCCACATTTTGTTGGTTGCTCTTGCGGT 3905 Query 111351 TGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAG 111410 | |||| ||||||| |||||||||| || || || |||||| ||||| | | || | Sbjct 3904 TACACGAATCCTTGAAGAGCATGTACGGTGTGCCAGTCTCCACTTGTGACTCAATGATGG 3845 Query 111411 CCTTCCAAA--CATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTT 111468 | ||||| || | | || | | || || || || |||||| |||||| || Sbjct 3844 CAAACCAAAGGGAT-TGAGCCTTG-ATAACACGATTTGCTCGACCCTCCTTCTCGTATTT 3787 Query 111469 TGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGG 111528 ||| ||||| | ||||||| |||||| | || | ||| ||||| ||||| || Sbjct 3786 TGTATAGAGCTCCTCAAACTTATCACCCCAAACATCAGCGAGTCCTGGACACTTGTGCGG 3727 Query 111529 ACAGAAAAGAGACCATTGACCACCTT--CCTCAACCCGCTTCATGAAAAGGTCTGGAATC 111586 || | || ||||| | || | || | || || |||||||| || | ||||| ||| Sbjct 3726 GCACATCAGTGACCAAT--CCTCATTGGCTTCCACGCGCTTCATAAACAAATCTGGTATC 3669 Query 111587 CACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA- 111645 ||||||| | || ||||| | | ||| || || | || ||| || ||| Sbjct 3668 CACAGGGCATAGAACAGATCCCGAGCACGATGTTCCTCTTTGCCAGTGTT-CTTCTTAAG 3610 Query 111646 CTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC--- 111702 || | |||||| | || ||| | ||||| ||||| || || | || | || ||| Sbjct 3609 ATCCAAGAACTCAAAGACATCGGAATGCCAAGGCTCGAGGTAAATGGCAAAAGCTCCAGG 3550 Query 111703 -CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTG 111761 |||| | || ||| | |||| ||||| || || ||||||||| | ||||| | Sbjct 3549 TCTTTTGCCG-CCACCCTGATCCACATAACGTGCCACATTGTTAAATACTCTCAGCATAG 3491 Query 111762 GAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACAT 111821 ||| | |||| ||| |||||| || || | ||| || | ||||| | | Sbjct 3490 GAACCAAGCCATTGGATGTACCATTGGTGCCACTAATCGAAGTTCCCTTGGCCCGAATGC 3431 Query 111822 CATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAG 111881 ||| | | || |||||||| || || |||||||||| |||||||| | | || Sbjct 3430 AATGCACATTCAGACCAATACCACCTGCTGACTTTGAGATCATCGCACACTGCTCCACAG 3371 Query 111882 TTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCT 111941 | | |||| || | ||||||||| ||| || || ||||| |||| || Sbjct 3370 ATTTAAAGATTCCCTCGATTGAGTCAGATACCATGGTGAGGAGAAAGCATGAAGACAGCT 3311 Query 111942 GCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGG 112001 | || | || || |||| ||| || ||||||| || || |||| | | || | Sbjct 3310 GAGGGCGTGTGGTTGCAGCTGCGAAAAGTGTTGGTGAGGCATGTGTGAAGAAGCGTTCCG 3251 Query 112002 ACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGA 112061 | | | | ||| ||||||| | |||||||| || || || || || ||||| || | Sbjct 3250 AAAGCAAATTGTAAGTCTCCAGTGCGGAATCAATATCATCTCCATGTATACCGATGGCAA 3191 Query 112062 CCCGCATGAACATGTACTGTGG 112083 | ||||| | ||||| |||||| Sbjct 3190 CTCGCATCAGCATGTGCTGTGG 3169 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627654654823200