Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq2144 192 7e-44
seq260 123 3e-23
seq19922 109 7e-19
>seq2144
Length=13752
Score = 192 bits (212), Expect = 7e-44
Identities = 919/1442 (64%), Gaps = 54/1442 (4%)
Strand=Plus/Minus
Query 118136 ATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGT 118195
||| | ||| ||||| |||||| || | || ||||| ||||| || | ||
Sbjct 4590 ATGATGATTCACAACCTGAAACTCTCCAGACAGCACTCGTCTTGTGTAGATGTTTGAAGT 4531
Query 118196 GTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGG 118255
||| || || || | ||||| ||||||| || |||||||| || || || ||||| ||
Sbjct 4530 GTAGGGTTCGAAAGATTCATTATTACCCATTATCTGGGCTGTCGATGCCGTTGGCATTGG 4471
Query 118256 TGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCA 118315
||| || || || ||||| | || | | || || |||||||| ||||
Sbjct 4470 TGCGATAAGCAGAGAATTACGCACTCCGTGCTTGCTTATCTTCTCCTTGAGTTTCGCCCA 4411
Query 118316 GTCGTAGTTGAGCTTTGTCTCCCCCTG---CCACATATCAAACTGGAGGATACCTTGGGA 118372
||| || || ||||| ||| |||||||||| ||||||| ||||| | |
Sbjct 4410 GTCCCAG---AGATTTGTGGGTACCTTATTCCACATATCATACTGGAGAATACCCTTGCT 4354
Query 118373 CGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGC 118432
|||| ||||||| | |||||||| | ||| || ||| |||| || |||| ||
Sbjct 4353 AACTGGACTTCCCTCATAGGTCTCATACGTGCCATCTTTCTCAGCCAGCTCACAGCTGGC 4294
Query 118433 CTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTC 118492
|| | || | | || || ||||| || || | ||||| |||| ||
Sbjct 4293 TTCCAATGCGCCATAGTAAATGGTTTCGAATATCTGTTGATTCAGAAGACACGCCTTATC 4234
Query 118493 GGAATCAAACGCGAGTCGGCAC-AAAATAAATACATCCGCGAGACCTTGGACACCGAGGC 118551
||| | | || | ||| ||||| || |||| || || ||||| || || | |
Sbjct 4233 ACTCTCATAGG-GATACCGCATTAAAATCAAAGCATCTGCAAGTCCTTGAACTCCAATTC 4175
Query 118552 CAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTC---CACGGGATAAAAATTCC 118608
||||||| |||||||| | || || ||| ||| ||| || || || ||||
Sbjct 4174 CAATTGGACGATGTCTTAAGTTGGATTTCTTAGC---CTCGGGCAGAGGGTAGTAATTGA 4118
Query 118609 TATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGT 118668
||||||| | | | || | |||||||| |||| ||| |||| || | ||||| |
Sbjct 4117 TATCGATGATCTTGTTCAAGTTTTTGGTAACAATCTTGGTGACCTCTTTGAGCTTCACAA 4058
Query 118669 AATCAAAACTGCGAGTCTCTTCATTG--ACATACTTAGGAAGGGCGATTGACGCCAGATT 118726
| || | || | ||| | || || || || || || || || |||| |||
Sbjct 4057 AGTCGTA----CGTCT-TCTCCGGTGTTACGAACATATTGAGAGCTATCGATGCCAAATT 4003
Query 118727 ACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACT 118786
|| |||| ||||||| ||| ||||| | |||||| ||||||||||| |
Sbjct 4002 GCAAACAGCAATCTCATCTGGTGCAGAATACTCAACAATTTCAGTGCACAAGTTACTGCA 3943
Query 118787 CTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCAT 118846
||||| ||||||| || | ||| || ||| |||||||| ||||||| | |||||
Sbjct 3942 TTTAATTGTGCCCACATTTTGTTGGTTGCTCTTGCGGTTACACGAATCCTTGAAGAGCAT 3883
Query 118847 GTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCC--AGACATCGGCAGC- 118903
||| || || || |||||| ||| |||| | || || || || || | |||
Sbjct 3882 GTACGGTGTGCCAGTCTCCACTTGTGACTCAATGATGGCAAACCAAAGGGATTG--AGCC 3825
Query 118904 -TG-GCACAGTGGCG-TTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAA 118960
|| ||| || || ||||| ||||| | |||||| ||||| ||||| | |||||
Sbjct 3824 TTGATAACA----CGATTTGCTCGACCCTCCTTCTCGTATTTTGTATAGAGCTCCTCAAA 3769
Query 118961 CTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTG 119020
|| |||||| | || | ||| ||||| ||| | ||||| | || ||||| |
Sbjct 3768 CTTATCACCCCAAACATCAGCGAGTCCTGGACACTTGTGCGGGCACATCAGTGACCAATC 3709
Query 119021 ACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATC 119080
|| | || || |||||||| || | ||||| ||||| || || |||| |||||
Sbjct 3708 CTCATTGGCTTCCACGCGCTTCATAAACAAATCTGGTATCCACAGGGCATAGAACAGATC 3649
Query 119081 CCGACAGCGAGCTTCTTCATCCCC------CTGATTGAGACGCAACTCCAAAAAGTCCAT 119134
|||| ||| ||| || | || || || ||| ||||| || || |
Sbjct 3648 CCGAGCACGATGTTCCTCTTTGCCAGTGTTCTTCTTAAGA------TCCAAGAACTCAAA 3595
Query 119135 GATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCC----CTTACGACGACCAG 119190
|| ||| | ||||| || || ||||| | || | | || ||| | || |||
Sbjct 3594 GACATCGGAATGCCAAGGCTCGAGGTAAATGGCAAAAGCTCCAGGTCTTTTGCCG-CCAC 3536
Query 119191 CCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGG 119250
|||| | ||||| | || ||||||||| | ||||| |||| | |||| ||
Sbjct 3535 CCTGATCCACATAACGTGCCACATTGTTAAATACTCTCAGCATAGGAACCAAGCCATTGG 3476
Query 119251 ATTGGCCATTTGTCCCCCGAATACGAGACTT--ATTGGCTCTGACATCGTGGATGTGCAT 119308
|| ||||| || || | ||| ||| | || ||||| | | || | | ||
Sbjct 3475 ATGTACCATTGGTGCCACTAAT-CGA-AGTTCCCTTGGCCCGAATGCAATGCACATTCAG 3418
Query 119309 ACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCC 119368
||||||||| ||||| |||||||||| ||| |||| | | | |||| ||
Sbjct 3417 ACCAATACCACCTGCTGACTTTGAGATCATCGCACACTGCTCCACAGATTTAAAGATTCC 3358
Query 119369 ATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTGT 119428
||||| |||||| | | || ||| ||||| |||| ||||| | | ||
Sbjct 3357 CTCGATTGAGTCAGATACCATGGTGAGGAGAAAGCATGAAGACAGCTGAGGGCGTGTGGT 3298
Query 119429 ACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTGTCGTA 119488
|||| ||| || ||||||| || || |||| | | || || | | | |||
Sbjct 3297 TGCAGCTGCGAAAAGTGTTGGTGAGGCATGTGTGAAGAAGCGTTCCGAAAGCAAATTGTA 3238
Query 119489 GGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACAT 119548
||||||| ||| ||| || || || || |||||||| | || ||||| | |||
Sbjct 3237 AGTCTCCAGTGCGGAATCAATATCATCTCCATGTATACCGATGGCAACTCGCATCAGCAT 3178
Query 119549 GT 119550
||
Sbjct 3177 GT 3176
>seq260
Length=58366
Score = 123 bits (136), Expect = 3e-23
Identities = 288/426 (68%), Gaps = 10/426 (2%)
Strand=Plus/Minus
Query 178883 AACCCGTGCCGATGCCTTCGGTTCCGTTCACGAGAACCATTGGAAGCGTTGGCATATAGA 178942
||||||| ||||| ||||||| ||| ||||| | |||||| |||| | || |||||
Sbjct 6888 AACCCGTACCGATACCTTCGGCTCCATTCACCAAAACCATCGGAATAATCGGAATATACC 6829
Query 178943 AGTCTGGTTCAATCGCACGCCCGTCATCATCCAAATAATTGAGCACGGGGTCGTCCCTCG 179002
| | |||||||| | || ||||| | ||| | | || || || ||| ||
Sbjct 6828 ATACAGGTTCAATTTTCTGACCATCATCCACTTGATATTGCAACAAAGGATCATCCAACG 6769
Query 179003 GATCAAAGATTTTACGAGCATCCCTGGTGAGTT--TTGTGAAGATGTACCTCGT--TTGA 179058
||| | |||| || | | ||| || | ||||||| || || | | |||
Sbjct 6768 GATGATAGATGAGTCGGG--TTAATGGCGACATCATTGTGAAAATATAACGAGCACTTGC 6711
Query 179059 GACGCATCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACATGGCTCAAGGAGATTG 179118
|| ||| |||||||| ||||||| || || |||||||||| || || || | |||
Sbjct 6710 -ACA-ATCCTTGCCACCGGTGAGACGAGTACCGAATTGACCACGGGGTTCCAGCAAATTA 6653
Query 179119 ATATTGTTTGAACCCATGTAGTCATTGGCCAACTTGACAATCGT-ATCCGCGAGGGAGAC 179177
|||||||| || || | |||| | ||||| || ||||| || ||| || || || ||
Sbjct 6652 ATATTGTTAGATCCGACATAGTTCTGAGCCAAGTTTACAATTGTCATCTGC-AGAGAAAC 6594
Query 179178 TTCACCGTGATGGTAAGCCGACTTGTCCGCCACATATGCCGCCAACTGCGCCACCTTCAT 179237
||| ||||||||||| |||||| | || ||||| | | | ||| || ||||| || |
Sbjct 6593 TTCGCCGTGATGGTATGCCGACATCTCGGCCACGGAACCAGACAATTGAGCCACTTTGAC 6534
Query 179238 CTCATCCTTGAGGTTCTTGTGGAAGCACGCATACATCACCTTTCTTTGTGAAGGCTTGAG 179297
||| ||| ||| | || |||| | |||| ||||| || || |||||| ||
Sbjct 6533 CTCGCGTTTGTCGTTACGCTTAAAACACGTAAACATGACCTTCCTCTGACCAGGCTTTAG 6474
Query 179298 GCCGTC 179303
|| ||
Sbjct 6473 ACCATC 6468
>seq19922
Length=1369
Score = 109 bits (120), Expect = 7e-19
Identities = 124/164 (76%), Gaps = 2/164 (1%)
Strand=Plus/Minus
Query 130012 CACGGCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAG 130071
||| ||||| || || || |||||||| |||||||| || |||||||||||| ||
Sbjct 1218 CACAGCAAAATCGCAATGAAGTCCCTCGTCGCGGGAGATCAGCTCATTCGAGAAGGTAAG 1159
Query 130072 ACCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCG-CACAAAATGAGCCAGAGAAGA 130130
||| ||||| ||||| |||||||||| |||||| |||| | ||||| ||| |||||
Sbjct 1158 ACCGGGCATAAGACCACGCTTCTTCAGCCAGAAGATCGACGCAAAA-CTGCCGCTGAAGA 1100
Query 130131 AGATCCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAG 130174
|||| || || ||| || || |||| || ||||| |||||
Sbjct 1099 AGATGCCTTCGACAGCAGCAAAGGCAATGATGCGCTCGCCAAAG 1056
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618063620940520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |