Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq2144 248 1e-60
seq19922 86.0 7e-12
>seq2144
Length=13752
Score = 248 bits (274), Expect = 1e-60
Identities = 1054/1640 (64%), Gaps = 40/1640 (2%)
Strand=Plus/Plus
Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281
|||||| ||||| | ||||| || ||||||||||| ||||| || || |||||||| |
Sbjct 3169 CCACAGCACATGCTGATGCGAGTTGCCATCGGTATACATGGAGATGATATTGATTCCGCA 3228
Query 104282 TTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTC 104341
||||||| ||| | | | || || | | |||| || || ||||||| || |||
Sbjct 3229 CTGGAGACTTACAATTTGCTTTCGGAACGCTTCTTCACACATGCCTCACCAACACTTTTC 3288
Query 104342 AATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGAC 104401
|||| || || | || || |||| ||||| || || ||| |||
Sbjct 3289 GCAGCTGCAACCACACGCCCTCAGCTGTCTTCATGCTTTCTCCTCACCATGGTATCTGAC 3348
Query 104402 TCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGG 104461
|||||| | || |||| | | || | | |||||||| |||||||||| || ||
Sbjct 3349 TCAATCGAGGGAATCTTTAAATCTGTGGAGCAGTGTGCGATGATCTCAAAGTCAGCAGGT 3408
Query 104462 GGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAAT 104521
|||||||| || | | ||| | | ||||| | || ||| | || || |||
Sbjct 3409 GGTATTGGTCTGAATGTGCATTGCATTCGGGCCAAGGGAACTTCGATTAGTGGCACCAAT 3468
Query 104522 GGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTA 104581
||| ||| |||| | |||| ||||| | ||||||||| || || |||||
Sbjct 3469 GGTACATCCAATGGCTTGGTTCCTATGCTGAGAGTATTTAACAATGTGGCACGTTATGTG 3528
Query 104582 AATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCCATGGCACGC 104637
|||| | | |||| | |||| ||| || | || | || || ||||| ||||| |
Sbjct 3529 GATCAGGGT-GGCGGCAAAAGACCTGGAGCTTTTGCCATTTACCTCGAGCCTTGGCATTC 3587
Query 104638 GGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGC-C 104696
||| || | |||||| | || | ||| || | ||||| | |||| |
Sbjct 3588 CGATGTCTTTGAGTTCTTGGATCTTAAGAAGAACACTGGCAAAGAGGA-ACATCGTGCTC 3646
Query 104697 GCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTG 104756
| ||||| |||| || || ||||| |||||| | || |||||| | || || | | ||
Sbjct 3647 GGGATCTGTTCTATGCCCTGTGGATACCAGATTTGTTTATGAAGCGCGTGGAAGCCAATG 3706
Query 104757 GCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGG 104816
||||||| || | || || ||||| || || ||| | |||| ||||||
Sbjct 3707 AGGATTGGTCACTGATGTGCCCGCACAAGTGTCCAGGACTCGCTGATGTTTGGGGTGATA 3766
Query 104817 AGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTGCCA- 104875
||||||| | || || ||||| |||||| | || ||||| || | | || | | ||
Sbjct 3767 AGTTTGAGGAGCTCTATACAAAATACGAGAAGGAGGGTCGAGCAAAT-CG-TGTTATCAA 3824
Query 104876 -GCTGCCGAT--GTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATAC 104932
||| | || | ||| || || | |||| ||| |||||||| ||||| |||
Sbjct 3825 GGCT--CAATCCCTTTGGTTTGCCATCATTGAGTCACAAGTGGAGACTGGCACACCGTAC 3882
Query 104933 ATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAG 104992
||||| | ||| || | ||||||| ||||| || ||| | ||| |||| || ||
Sbjct 3883 ATGCTCTTCAAGGATTCGTGTAACCGCAAGAGCAACCAACAAAATGTGGGCACAATTAAA 3942
Query 104993 AGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGT 105052
| || | || || ||||| | || | | | | |||||||| ||||| ||
Sbjct 3943 TGCAGTAACTTGTGCACTGAAATTGTTGAGTATTCTGCACCAGATGAGATTGCTGTTTGC 4002
Query 105053 AACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTAT 105112
|| | ||||| || |||||| | || || || ||| ||||| | || | |
Sbjct 4003 AATTTGGCATCGATAGCTCTCAATATGTTCGTAACACCGGAG---AAGACGTACGACTTT 4059
Query 105113 GAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGA 105172
| || ||| | || || || || | ||| ||||||||| | |||| | || ||||
Sbjct 4060 GTGAAGCTCAAAGAGGTCACCAAGATTGTTACCAAAAACTTGAACAAGATCATCGATATC 4119
Query 105173 AATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGT 105229
|||| ||||| | ||| ||| ||||| || | ||||| |||||||||||
Sbjct 4120 AATTACTACCCTCTGCCCGAG---GCTAAGAAATCCAACTTAAGACATCGTCCAATTGGA 4176
Query 105230 CTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGAC 105289
| || ||||| || || || |||| || ||| | || | | | ||| ||
Sbjct 4177 ATTGGAGTTCAAGGACTTGCAGATGCTTTGATTTTAATGCGGTATCCCTATGAGAGTGAT 4236
Query 105290 GAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGCG 105349
| ||| | ||| | ||||| || ||||| || | | ||| | || ||
Sbjct 4237 AAGGCGTGTCTTCTGAATCAACAGATATTCGAAACCATTTACTATGGCGCATTGGAAGCC 4296
Query 105350 AGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCA 105409
|| | ||| |||| ||| ||||| | ||||| |||| |||||| ||||| ||
Sbjct 4297 AGCTGTGAGCTGGCTGAGAAAGATGGCACGTATGAGACCTATGAGGGAAGTCCAG-TTAG 4355
Query 105410 CAAGGG-GTGCTTCAATTTGATATGTGG--GAAGGTGAGACCAAGCTTCACTACGACTGG 105466
|||||| | || || | |||||||||| ||||| ||| || || ||||||
Sbjct 4356 CAAGGGTATTCTCCAGTATGATATGTGGAATAAGGT--ACCCACAAATCTCTGGGACTGG 4413
Query 105467 GAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCA 105526
| |||||||| || | || | || | ||||| ||| || || || |||
Sbjct 4414 GCGAAACTCAAGGAGAAGATAAGCAAGCACGGAGTGCGTAATTCTCTGCTTATCGCACCA 4473
Query 105527 ATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACG 105586
|||||||| || || || || || || ||||||||||||||| || |||||||||||
Sbjct 4474 ATGCCAACGGCATCGACAGCCCAGATAATGGGTAATAATGAATCTTTCGAACCCTACACT 4533
Query 105587 ACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCATCTC 105646
| |||||||| ||| || || | ||||||||| | |||| || | ||| |
Sbjct 4534 TCAAACATCTACACAAGACGAGTGCTGTCTGGAGAGTTTCAGGTTGTGAATCATCATTTG 4593
Query 105647 GTGGATGACCTCAAAGAGATTGGTC-TCTGGTCCAAGGATATGAAGGATCTCATGGT-GA 105704
|| ||| || | || | ||| | | ||| | |||||||| ||| || | |
Sbjct 4594 TTGCGTGATCTAACCGA-ACTGGACTTGTGGGATGATGATATGAAAAATCAAATAATCGC 4652
Query 105705 AAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCC---AAATGAAATTAAGAAGTTGT 105761
||| |||| ||||| ||||| || | | ||||| ||||| | ||| | |
Sbjct 4653 AAG-TCGTGGCTCCATACAAAACATCGAAAACATTCCTCAAAATGTGCGT--GAA-CTAT 4708
Query 105762 ACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGATCGTGGTC 105821
| || ||||||||||| | ||| || | ||||| |||||||||||
Sbjct 4709 ATAAGACCGTTTGGGAAATATCCGTAAAGTCCACAATCAAAATGGCAGCAGATCGTGGAG 4768
Query 105822 GCTTCATTGATCAAAGTCAA 105841
||||||||||||||||||
Sbjct 4769 CTTTCATTGATCAAAGTCAA 4788
>seq19922
Length=1369
Score = 86.0 bits (94), Expect = 7e-12
Identities = 119/164 (73%), Gaps = 2/164 (1%)
Strand=Plus/Plus
Query 94797 CTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTT 94856
||||| ||||| || | || ||||| ||| || || ||||||||| || ||
Sbjct 1056 CTTTGGCGAGCGCATCATTGCCTTTGCTGCTGTCGAAGGCATCTTCTTCAGCGGCAGTTT 1115
Query 94857 CTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACG 94915
|||| | || | ||||| |||||||| ||||| ||||| ||||| |||||| || |
Sbjct 1116 -TGCGTCGATCTTCTGGCTGAAGAAGCGTGGTCTTATGCCCGGTCTTACCTTCTCGAATG 1174
Query 94916 AGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGCGGTG 94959
|||| ||||| || ||||||||||| || || ||||| |||
Sbjct 1175 AGCTGATCTCCCGCGACGAGGGACTTCATTGCGATTTTGCTGTG 1218
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 582910355039080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |