Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq19922 116 4e-21
seq260 116 4e-21
>seq19922
Length=1369
Score = 116 bits (128), Expect = 4e-21
Identities = 323/489 (66%), Gaps = 11/489 (2%)
Strand=Plus/Minus
Query 74784 ATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGAT- 74842
|||| |||||||| || | ||| || |||||||| ||||||||||||| ||| |||||
Sbjct 1181 ATCAGCTCATTCGAGAAGGTAAGACCGGGCATAAGACCACGCTTCTTCAGCCAGAAGATC 1122
Query 74843 GGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTG 74902
| | || || || ||||||||||||||||||||| |||||||| | | ||| |
Sbjct 1121 GACGCA-AAACTGCCGCTGAAGAAGATGCCTTCGACAGCAGCAAAGGCAATGATGCGCT- 1064
Query 74903 CGCGAACGGT----GCATCGGAAGTCATCCAAGTCTGAGCCCATTCAGCTTTTCGTTTGA 74958
||| || | | || | || | ||||||| | ||||||| || || || || || |
Sbjct 1063 CGCCAAAGTTTGCCGCCTTCGAGGAGATCCAAGACAGAGCCCAATCTGCCTTACGCTTCA 1004
Query 74959 CCGCAGGGACAGTATCGATCGCTTGGAAGAGGCTTGCCTTCTCTTCGGGATCCTTGACGA 75018
| || || | || || || || | ||||||| | || | |||||| | |
Sbjct 1003 CAGCGGGCATCGTTTCAATGGCATTGAAGAGGTAGTCGCGCTGATGCGGATCCCGAATGT 944
Query 75019 GCTTGTCAATCATAAGTGAGTACGTCTCCGAATGAATCGACTCGTTGAACGACTGGTACG 75078
|||| || | | |||| | ||||| || | ||| || |||| |
Sbjct 943 AAGTGTCGATGAGCACGCTGTACATTTCCGAGTGGACATTCTCCATGGCAATCTGGAAGC 884
Query 75079 CGTAGAAAGACCGCGCCTCTGCAATCTGTACATCCT--TTGAAAAATTCATGTCGATATT 75136
| || || | || ||||||| || || || |||| |||| || | | | |||
Sbjct 883 CATAAAAGCAACGTGCCTCTGTGATTTGCACTTCCTGGCTGAAGCGCTC--GACAAGATT 826
Query 75137 CTCCATGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTACCATTTTGATAAAGTGGCG 75196
||| | || |||||||| |||||||| || ||||||| || | || ||||| ||
Sbjct 825 CTCATTAACAATGCCGTCAGAGGCGGCAAAGAAAGCCAAAACATGTGAAATGAAGTGACG 766
Query 75197 CTCATCGTCAGTGAGTTTGTCCCAATCCTTCAGGTCCCCCGCCAAATCAATCTCCTCGAC 75256
||||| ||| || ||| |||| || ||| |||| | | ||| | ||||| ||
Sbjct 765 CTCATTGTCTGTTAGTCGAGCCCAGTCGGTCATGTCCTTGGATAGATCCACTTCCTCCAC 706
Query 75257 CGTCCAGAA 75265
||||||||
Sbjct 705 GGTCCAGAA 697
>seq260
Length=58366
Score = 116 bits (128), Expect = 4e-21
Identities = 208/299 (70%), Gaps = 6/299 (2%)
Strand=Plus/Minus
Query 117305 GTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGT 117364
|||||||| ||||||| |||||| |||||||||||| | ||||| |||||||||||
Sbjct 6733 GTGAAAATATAACGAGCACTTGCACAATCCTTGCCACCGGTGAGACGAGTACCGAATTGA 6674
Query 117365 CCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACA 117424
|||| || |||| | || | ||||| | || ||| |||| ||||||||||| |||
Sbjct 6673 CCACGGGGTTCCAGCAAATTAATATTGTTAGATCCGACATAGTTCTGAGCCAAGTTTACA 6614
Query 117425 ATCGTACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCCGCCACGTAGCCC 117484
|| || || || | || || || || || |||| | ||| |||||| | ||
Sbjct 6613 ATTGTCATCTGCAGAGAAACTTCGCCGTGATGGTATGCCGACATCTCGGCCACGGAACCA 6554
Query 117485 GCCAGCTGAGCCACCTTCATGTCTGACGTCAG--GTTCTTCTTGAGGCAGGCATAAATCA 117542
| || |||||||| || | || ||| | ||| ||| | || | | | || |
Sbjct 6553 GACAATTGAGCCACTTTGA--CCTCGCGTTTGTCGTTACGCTTAAAACACGTAAACATGA 6496
Query 117543 CCTTGCGCTGACTTGGCTTCAGACCATCCGCCACGTGAGGG-ATCGAACGCTTGATGTC 117600
|||| | ||||| ||||| ||||||||| | | | |||| || ||||| | | ||||
Sbjct 6495 CCTTCCTCTGACCAGGCTTTAGACCATCCACTA-GACAGGGAATGGAACGTTCGTTGTC 6438
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 546887212106600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |