Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq2274 168 8e-37
seq355 143 3e-29
seq7704 131 2e-25
seq260 113 5e-20
>seq2274
Length=37031
Score = 168 bits (186), Expect = 8e-37
Identities = 174/228 (76%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||| || || |||||||| | || |||||||| || || | ||||| ||| ||
Sbjct 30158 AATGCAGATTTTCGTCAAGACCTTGACTGGCAAGACCATCACCTTGGAGGTGGAGCCATC 30217
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
||||| ||||| ||| | ||||| || || |||||||||||||| ||||||||||| ||
Sbjct 30218 TGATACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGTATTCCTCCAGATCA 30277
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
||||||||| || || ||||| ||||| || ||||||| ||| || || | ||||| ||
Sbjct 30278 GCAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGTCGCACTCTTTCTGACTACAA 30337
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| || || || || | || | ||||| || |||||
Sbjct 30338 CATCCAGAAGGAGTCAACCCTCCACTTGGTGCTCCGTCTGCGTGGTGG 30385
>seq355
Length=9390
Score = 143 bits (158), Expect = 3e-29
Identities = 154/203 (76%), Gaps = 2/203 (1%)
Strand=Plus/Plus
Query 27391 AGAAATATTACTATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTT 27450
||||||||| | |||||| |||||||| || || | || |||||||| || ||| |
Sbjct 9190 AGAAATATTG--AAAATGCAGATCTTTGTGAAAACATTGACTGGCAAGACCATCACTTTG 9247
Query 27451 GAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGA 27510
|| ||||| | || | ||||| ||| ||||||||||||| || |||||||||||
Sbjct 9248 GAAGTTGAACCTTCCGACACCATTGAGAATGTGAAGGCTAAAATCCAAGACAAGGAGGGT 9307
Query 27511 ATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACC 27570
|| || ||||| ||||||||||| ||||| || || ||||| || ||||||| |||||
Sbjct 9308 ATCCCCCCAGATCAGCAGCGTCTCATTTTCGCCGGAAAGCAGCTGGAGGATGGCCGTACT 9367
Query 27571 CTAGCAGACTATAATGTCCAAAA 27593
|| | ||||| || |||| ||
Sbjct 9368 CTGTCGGACTACAACATCCAGAA 9390
>seq7704
Length=29863
Score = 131 bits (144), Expect = 2e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| || || || || || || ||||| || ||||||||||| || |
Sbjct 18350 ATGCAGATCTTCGTTAAAACCCTCACGGGTAAGACCATCACTCTTGAGGTCGAACCGTCG 18409
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||| | |||| | || || || ||||||||||| || |||||||||||||| |||
Sbjct 18410 GATACCATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAAGGAATTCCTCCAGATCAG 18469
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||| | || |||||||| |||||| | || |||| || || || | || || ||
Sbjct 18470 CAGCGTTTGATCTTTGCTGGCAAGCAATTGGAAGATGGCCGCACTCTCTCCGATTACAAC 18529
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| || || || || || | || | || | || ||||| |||||
Sbjct 18530 ATTCAGAAAGAGTCAACATTGCACTTGGTGCTCCGCCTTCGTGGTGG 18576
>seq260
Length=58366
Score = 113 bits (124), Expect = 5e-20
Identities = 235/350 (67%), Gaps = 0/350 (0%)
Strand=Plus/Plus
Query 32053 AAGGTGGCGCAGCTGTCGGGCTACGTGGCAGAGCAAACGGCCTATCACCACGGCGAGGCG 32112
|| ||||| || |||| || | |||||| ||| |||| || || |||||||| |
Sbjct 6537 AAAGTGGCTCAATTGTCTGGTTCCGTGGCCGAGATGTCGGCATACCATCACGGCGAAGTT 6596
Query 32113 TCGCTCCAGGGCACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAAATAACCTGAAC 32172
|| || ||| || ||||| ||| | |||||||||| |||||| | || || | ||
Sbjct 6597 TCTCTGCAGATGACAATTGTAAACTTGGCTCAGAACTATGTCGGATCTAACAATATTAAT 6656
Query 32173 TTACTCGAGCCATCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGGATGCTGCGAGC 32232
|| || || || ||| || || || || || ||| |||||||||||||| ||| ||
Sbjct 6657 TTGCTGGAACCCCGTGGTCAATTCGGTACTCGTCTCACCGGTGGCAAGGATTGTGCAAGT 6716
Query 32233 TCCCGTTACATCTTCACCCGTCTCGCACCTTCGACGCGCAAGATTTTCGACCCGTCGGAC 32292
| ||||| || ||||| | | || | || || || | | |||| |||
Sbjct 6717 GCTCGTTATATTTTCACAATGATGTCGCCATTAACCCGACTCATCTATCATCCGTTGGAT 6776
Query 32293 GATGCGGTGCTCAAGTACAATTTTGATGACGGTCAGCGGGTCGAGCCGGTGTTCTACAGT 32352
||| | || | | || | | ||||| |||||| | || || || | || | |
Sbjct 6777 GATCCTTTGTTGCAATATCAAGTGGATGATGGTCAGAAAATTGAACCTGTATGGTATATT 6836
Query 32353 CCGGTGCTTCCGATGATCTTGGTGAACGGTGCAGAAGGCATCGGAACGGG 32402
||| | |||||||| | |||||||| || || ||||| ||||| |||||
Sbjct 6837 CCGATTATTCCGATGGTTTTGGTGAATGGAGCCGAAGGTATCGGTACGGG 6886
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 569967736125040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |