Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04] 48,067 sequences; 123,674,749 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq6480 118 9e-22 >seq6480 Length=6706 Score = 118 bits (130), Expect = 9e-22 Identities = 154/212 (73%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 29897 TAGACGTGAGCGTCTCCCAGGTTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGA 29956 ||||| ||||| || |||| | |||| ||||| || || |||| ||| ||||| || Sbjct 769 TAGACATGAGCATCGCCCAAGGTGTGCACAAAGTCACCAGGTTTGTACCCAGTGACATGG 710 Query 29957 GCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATG 30016 || |||||||| ||||| || | ||| || ||||||||||| || ||||| |||||| Sbjct 709 GCGATCATGTAGGTGAGCAGTGCATAGGATGCAATGTTAAAGGGAACGCCGAGTCCCATG 650 Query 30017 TCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTC--CGTCGCT----CACGTAAAAC 30070 ||| | | ||| || |||||||||||||| || | || || || |||||| Sbjct 649 TCCGCACTGCGCTGATACAGCTGACACGAGAGTTCACCACGAGACTGTGAGACATAAAAC 590 Query 30071 TGACACATGGCGTGGCACGGAGGAAGAGCCAT 30102 || || | ||||||||| || |||||||| Sbjct 589 TGCGCCAGGCAGTGGCACGGCGGCAGAGCCAT 558 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406072376638164