Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq7704 149 5e-31
seq102 149 5e-31
>seq7704
Length=29863
Score = 149 bits (164), Expect = 5e-31
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || ||||| || || || ||| | || |||||||| || ||||||||
Sbjct 18350 ATGCAGATCTTCGTTAAAACCCTCACGGGTAAGACCATCACTCTTGAGGTCGAACCGTCG 18409
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | || || | |||||| || ||||| ||||||||||| || || || |||||
Sbjct 18410 GATACCATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAAGGAATTCCTCCAGATCAG 18469
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||||| || | || ||||| ||||||||||| | || | ||||||||||||
Sbjct 18470 CAGCGTTTGATCTTTGCTGGCAAGCAATTGGAAGATGGCCGCACTCTCTCCGATTACAAC 18529
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
||||| || ||||| || || || ||||| | || | || |||||
Sbjct 18530 ATTCAGAAAGAGTCAACATTGCACTTGGTGCTCCGCCTTCGTGGTGG 18576
>seq102
Length=36553
Score = 149 bits (164), Expect = 5e-31
Identities = 207/288 (72%), Gaps = 4/288 (1%)
Strand=Plus/Minus
Query 135474 TGTGGAACGCGGCACAACGGCAGCT--TAAGCGAGAAGGCAAAATGCACGGATTTATGCG 135531
|||||||| | ||||| ||| || | || ||| ||||| ||||||||||| ||||
Sbjct 13055 TGTGGAACTCTGCACAGTTGCAACTGGTCAGGGAG--GGCAAGATGCACGGATTCCTGCG 12998
Query 135532 CATGTATTGGGCAAAAAAGATATTGGAATGGTCTGCATCGCCTGCAGAGGCGCTACAACA 135591
|||||| ||||| || || || | || ||| ||| | || | ||||| | | |
Sbjct 12997 CATGTACTGGGCGAAGAAAATTCTCGAGTGGACTGAGACTCCCGAGCAGGCGTTGGAGTA 12938
Query 135592 CGCAATATTTTTTAATGATTACTACAGTTTAGATGGACGCGATTCAAATGGCTACGTAGG 135651
| ||| | | |||||| | ||||| | |||||||| ||| | ||||| ||||| ||
Sbjct 12937 CTGCATACTACTCAATGATAAGTACAGCCTGGATGGACGGGATCCCAATGGGTACGTCGG 12878
Query 135652 TTGTATGTGGTCTATTTGCGGTGTACACGATCAAGGATGGAAGGAGCGCAAAGTGTTTGG 135711
|| |||||||| || | || || || ||||| || |||||||||||| | | |||||
Sbjct 12877 CTGCATGTGGTCAGTTGGTGGCGTTCATGATCAGGGCTGGAAGGAGCGCGACATCTTTGG 12818
Query 135712 CAAGATTCGCTATATGAACTATGACGGTTGTACAAGAAAATTTAATGT 135759
|||||| || || ||||||||| | || || | | |||||| ||||
Sbjct 12817 CAAGATACGATACATGAACTATCAAGGCTGCAAGCGCAAATTTGATGT 12770
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434657084715840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |