Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04] 48,067 sequences; 123,674,749 total letters Query= NC_028896.1 Length=32675 Score E Sequences producing significant alignments: (Bits) Value seq47809 158 3e-34 >seq47809 Length=786 Score = 158 bits (174), Expect = 3e-34 Identities = 140/175 (80%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 11702 CCAGCATCACCGCCCGTGCGGCCTCATTCACACGCTGACGCCAGATAAGCTCACGATAAG 11761 |||||||||| ||| |||||| |||||||| ||||| || | | || || || |||| Sbjct 184 CCAGCATCACGGCCTTTGCGGCTTCATTCACGCGCTGGCGTAACAGCAGTTCGCGGTAAG 125 Query 11762 CATTTTCCTCCAGCAGTTTGACGAGAGGCTCAGATTCCAGCGTCAGGGTACGGGCGACCG 11821 ||||||| | || ||||||||||| ||||| |||||||||| || || ||||||| | Sbjct 124 CATTTTCTTGCAACAGTTTGACGATCGGCTCCGATTCCAGCGCCAATGTGCGGGCGATGG 65 Query 11822 CCTCCTGCTGGTCTTCCGGGTAAAGGGAAATCAGTGTCGCCTTGCGTTCAGCGAG 11876 | || |||| ||||||||||||||||||||||| || |||||||| || || || Sbjct 64 CTTCGCGCTGCTCTTCCGGGTAAAGGGAAATCAGCGTGGCCTTGCGATCGGCCAG 10 Score = 91.5 bits (100), Expect = 3e-14 Identities = 168/245 (69%), Gaps = 6/245 (2%) Strand=Plus/Minus Query 11107 ATGTCGGCCAGTGGTGCGGCCAGCTCGACACGCTGCACGCCTTCCACATGCAAAGCGGCA 11166 ||||||||| | || | || || || || ||||| ||||| |||||| ||||| Sbjct 698 ATGTCGGCCTGCGGGGTCTTCAATTCAACGCGTTGCACCCCTTCGGCATGCAGTGCGGCG 639 Query 11167 TAAATGGCAGACAGACGGATGTCGCGCCCCAGCCGGTGCTGTGCCGTGATATACGCTTCC 11226 || || || |||| || ||||| || || | |||||||| || |||| || || | Sbjct 638 TAGATTGCCGACAAGCGAATGTCACGGCCTAAACGGTGCTGGGCGCTGATGTAATTTTTC 579 Query 11227 AGCTTTTTCACAGCGGCAGCGCGA---ATGGGTTCGCTTTCGGGACCAGGGTAAAGGTAA 11283 || ||| | ||||||||||| | ||||| ||| || |||||||| ||||| Sbjct 578 AG---TTTGGCTTCGGCAGCGCGACGCACCGGTTCTGCTTCAGGGCCAGGGTAGAGGTAC 522 Query 11284 AGCGTGGCGTTTATCTGATATTCAACGATGGCGGCAGACTGCACGGTCACGCGGTCGGCC 11343 || ||| | || | || | |||| |||||| | ||||| ||||| |||||| Sbjct 521 AGTACGGCATCGATGTTGTAGCTGATGATGTTGGCAGAGCGGACGGTGACGCGATCGGCC 462 Query 11344 ACCGG 11348 ||||| Sbjct 461 ACCGG 457 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 104378787018198