Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_028896.1
Length=32675
Score E
Sequences producing significant alignments: (Bits) Value
seq47809 158 3e-34
>seq47809
Length=786
Score = 158 bits (174), Expect = 3e-34
Identities = 140/175 (80%), Gaps = 0/175 (0%)
Strand=Plus/Minus
Query 11702 CCAGCATCACCGCCCGTGCGGCCTCATTCACACGCTGACGCCAGATAAGCTCACGATAAG 11761
|||||||||| ||| |||||| |||||||| ||||| || | | || || || ||||
Sbjct 184 CCAGCATCACGGCCTTTGCGGCTTCATTCACGCGCTGGCGTAACAGCAGTTCGCGGTAAG 125
Query 11762 CATTTTCCTCCAGCAGTTTGACGAGAGGCTCAGATTCCAGCGTCAGGGTACGGGCGACCG 11821
||||||| | || ||||||||||| ||||| |||||||||| || || ||||||| |
Sbjct 124 CATTTTCTTGCAACAGTTTGACGATCGGCTCCGATTCCAGCGCCAATGTGCGGGCGATGG 65
Query 11822 CCTCCTGCTGGTCTTCCGGGTAAAGGGAAATCAGTGTCGCCTTGCGTTCAGCGAG 11876
| || |||| ||||||||||||||||||||||| || |||||||| || || ||
Sbjct 64 CTTCGCGCTGCTCTTCCGGGTAAAGGGAAATCAGCGTGGCCTTGCGATCGGCCAG 10
Score = 91.5 bits (100), Expect = 3e-14
Identities = 168/245 (69%), Gaps = 6/245 (2%)
Strand=Plus/Minus
Query 11107 ATGTCGGCCAGTGGTGCGGCCAGCTCGACACGCTGCACGCCTTCCACATGCAAAGCGGCA 11166
||||||||| | || | || || || || ||||| ||||| |||||| |||||
Sbjct 698 ATGTCGGCCTGCGGGGTCTTCAATTCAACGCGTTGCACCCCTTCGGCATGCAGTGCGGCG 639
Query 11167 TAAATGGCAGACAGACGGATGTCGCGCCCCAGCCGGTGCTGTGCCGTGATATACGCTTCC 11226
|| || || |||| || ||||| || || | |||||||| || |||| || || |
Sbjct 638 TAGATTGCCGACAAGCGAATGTCACGGCCTAAACGGTGCTGGGCGCTGATGTAATTTTTC 579
Query 11227 AGCTTTTTCACAGCGGCAGCGCGA---ATGGGTTCGCTTTCGGGACCAGGGTAAAGGTAA 11283
|| ||| | ||||||||||| | ||||| ||| || |||||||| |||||
Sbjct 578 AG---TTTGGCTTCGGCAGCGCGACGCACCGGTTCTGCTTCAGGGCCAGGGTAGAGGTAC 522
Query 11284 AGCGTGGCGTTTATCTGATATTCAACGATGGCGGCAGACTGCACGGTCACGCGGTCGGCC 11343
|| ||| | || | || | |||| |||||| | ||||| ||||| ||||||
Sbjct 521 AGTACGGCATCGATGTTGTAGCTGATGATGTTGGCAGAGCGGACGGTGACGCGATCGGCC 462
Query 11344 ACCGG 11348
|||||
Sbjct 461 ACCGG 457
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 104378787018198
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |