Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04] 48,067 sequences; 123,674,749 total letters Query= NC_028943.1 Length=29237 Score E Sequences producing significant alignments: (Bits) Value seq47809 158 2e-34 >seq47809 Length=786 Score = 158 bits (174), Expect = 2e-34 Identities = 155/200 (78%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 17618 CTTGCCGAACGCAAGGCGACACTGATTTCCCTTTACCCGGAAGACCAGCAGGAGGCGGTT 17677 || ||||| |||||||| || ||||||||||||||||||||||| |||| || || | Sbjct 10 CTGGCCGATCGCAAGGCCACGCTGATTTCCCTTTACCCGGAAGAGCAGCGCGAAGCCATC 69 Query 17678 GCCCGTACCCTGACGCTGGAATCCGAGCCTCTCGTCAAACTGCTGGAGGAAAATGCTTAT 17737 ||||| || || |||||||||| ||||| ||||||||||| || | ||||||||||| Sbjct 70 GCCCGCACATTGGCGCTGGAATCGGAGCCGATCGTCAAACTGTTGCAAGAAAATGCTTAC 129 Query 17738 CGTGAGCTTATCTGGCGTCAGCGTGTGAATGAGGCCGCACGGGCGGTAATGCTGGCCTGT 17797 || || || | | || ||||| |||||||| |||||| ||| || ||||||| | | Sbjct 130 CGCGAACTGCTGTTACGCCAGCGCGTGAATGAAGCCGCAAAGGCCGTGATGCTGGGTTAT 189 Query 17798 GCCGCCGGTAATGACCTTGA 17817 ||| ||| | ||||| || Sbjct 190 GCCAGCGGCAGCGACCTCGA 209 Score = 95.1 bits (104), Expect = 2e-15 Identities = 154/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 18146 CCGGTGGCCGACCGCGTGACCGTGCAGTCTGCCGCCATCGTTGAATACCAGATAAACGCC 18205 ||||||||||| ||||| ||||| | |||||| |||| | ||| | || | ||| Sbjct 457 CCGGTGGCCGATCGCGTCACCGTCCGCTCTGCCAACATCATCAGCTACAACATCGATGCC 516 Query 18206 ACGCTTTACCTTTACCCTGGTCCCGAAAGCGAACCCATCCG-CGCTGCTGCCGTGAAAAA 18264 || ||||| |||||||| || ||| ||||| | || ||| ||||||| || Sbjct 517 GTACTGTACCTCTACCCTGGCCCTGAAGCAGAACCGGTGCGTCGC-GCTGCCGAAGCCAA 575 Query 18265 GCTGGAAGCGTACATCACGGCACAGCACCGGCTGGGGCGCGACATCCGTCTGTCTGCCAT 18324 ||| || ||||||| || |||||||| | || || ||||| || |||| || || Sbjct 576 ACTGAAAAATTACATCAGCGCCCAGCACCGTTTAGGCCGTGACATTCGCTTGTCGGCAAT 635 Query 18325 TTATGCCGCGTTGCATGTGGAAGGCGTGCAGCGTGTCGA 18363 || ||||| |||||| ||||| ||||| || || || Sbjct 636 CTACGCCGCACTGCATGCCGAAGGGGTGCAACGCGTTGA 674 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 93383466683346