Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_028943.1
Length=29237
Score E
Sequences producing significant alignments: (Bits) Value
seq47809 158 2e-34
>seq47809
Length=786
Score = 158 bits (174), Expect = 2e-34
Identities = 155/200 (78%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 17618 CTTGCCGAACGCAAGGCGACACTGATTTCCCTTTACCCGGAAGACCAGCAGGAGGCGGTT 17677
|| ||||| |||||||| || ||||||||||||||||||||||| |||| || || |
Sbjct 10 CTGGCCGATCGCAAGGCCACGCTGATTTCCCTTTACCCGGAAGAGCAGCGCGAAGCCATC 69
Query 17678 GCCCGTACCCTGACGCTGGAATCCGAGCCTCTCGTCAAACTGCTGGAGGAAAATGCTTAT 17737
||||| || || |||||||||| ||||| ||||||||||| || | |||||||||||
Sbjct 70 GCCCGCACATTGGCGCTGGAATCGGAGCCGATCGTCAAACTGTTGCAAGAAAATGCTTAC 129
Query 17738 CGTGAGCTTATCTGGCGTCAGCGTGTGAATGAGGCCGCACGGGCGGTAATGCTGGCCTGT 17797
|| || || | | || ||||| |||||||| |||||| ||| || ||||||| | |
Sbjct 130 CGCGAACTGCTGTTACGCCAGCGCGTGAATGAAGCCGCAAAGGCCGTGATGCTGGGTTAT 189
Query 17798 GCCGCCGGTAATGACCTTGA 17817
||| ||| | ||||| ||
Sbjct 190 GCCAGCGGCAGCGACCTCGA 209
Score = 95.1 bits (104), Expect = 2e-15
Identities = 154/219 (70%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 18146 CCGGTGGCCGACCGCGTGACCGTGCAGTCTGCCGCCATCGTTGAATACCAGATAAACGCC 18205
||||||||||| ||||| ||||| | |||||| |||| | ||| | || | |||
Sbjct 457 CCGGTGGCCGATCGCGTCACCGTCCGCTCTGCCAACATCATCAGCTACAACATCGATGCC 516
Query 18206 ACGCTTTACCTTTACCCTGGTCCCGAAAGCGAACCCATCCG-CGCTGCTGCCGTGAAAAA 18264
|| ||||| |||||||| || ||| ||||| | || ||| ||||||| ||
Sbjct 517 GTACTGTACCTCTACCCTGGCCCTGAAGCAGAACCGGTGCGTCGC-GCTGCCGAAGCCAA 575
Query 18265 GCTGGAAGCGTACATCACGGCACAGCACCGGCTGGGGCGCGACATCCGTCTGTCTGCCAT 18324
||| || ||||||| || |||||||| | || || ||||| || |||| || ||
Sbjct 576 ACTGAAAAATTACATCAGCGCCCAGCACCGTTTAGGCCGTGACATTCGCTTGTCGGCAAT 635
Query 18325 TTATGCCGCGTTGCATGTGGAAGGCGTGCAGCGTGTCGA 18363
|| ||||| |||||| ||||| ||||| || || ||
Sbjct 636 CTACGCCGCACTGCATGCCGAAGGGGTGCAACGCGTTGA 674
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 93383466683346
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |