Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04] 48,067 sequences; 123,674,749 total letters Query= NC_029013.1 Length=177688 Score E Sequences producing significant alignments: (Bits) Value seq47487 140 4e-28 >seq47487 Length=501 Score = 140 bits (154), Expect = 4e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 77130 GGGCTGAACAGTGTGATGTAATCGTTATTGATTAAACGCTTATACATCAAATCGTTAAGC 77189 ||||||||||| ||||||| ||| ||||| | |||| ||||||| | ||| | | Sbjct 212 GGGCTGAACAGGGTGATGTCTTCGCCTTTGATCAGGCGCTGGTACATCAGACGGTTCAAC 153 Query 77190 TGAACGCCATAATCCAGGTGACGAATACGGTTATTCTCAACACCTTTGTTGTTTTTCAGA 77249 || ||||| || |||| ||| || | ||||| ||||| || |||||||||||| Sbjct 152 TGCACGCCGTAGTCCATGTGGCGCACGCGGTTGCCTTCAACGCCGCGGTTGTTTTTCAGC 93 Query 77250 ACCAGCAGGTTTTCAACTTCCAAATGCCAGATCGGATAATACAACGTTGCAGCACCACCA 77309 ||||||||| |||| ||||||| ||||| ||||| || ||| ||||| || || || Sbjct 92 ACCAGCAGGCTTTCCACTTCCAGGTGCCACATCGGGTAGAACAGGGTTGCCGCGCCGCCG 33 Query 77310 CGAACGCCACCTTGTGAACAGGATTTAACCGC 77341 || ||||| || || || |||||||| || || Sbjct 32 CGCACGCCGCCCTGAGAGCAGGATTTGACGGC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 568132039743360