Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_029255.1
Length=129563
Score E
Sequences producing significant alignments: (Bits) Value
seq6480 96.9 3e-15
>seq6480
Length=6706
Score = 96.9 bits (106), Expect = 3e-15
Identities = 215/323 (67%), Gaps = 6/323 (2%)
Strand=Plus/Minus
Query 118378 TCTTCAAACTTAAAGTCTTCTATATTTTTGATATCCTTGTTTATGGATAGTGTGGGAAAC 118437
||||||| | || ||||| |||||||||| | | || | || ||||||||
Sbjct 880 TCTTCAATGGTGAAATCTTCGATATTTTTGACCTGCCGCTTGAACTGAAGCTTGGGAAAC 821
Query 118438 GGGAGAGGCTCCCTTGTGAGTTGGAGTTTCAGTGGCTCAATGTGATTCATATAGACATGA 118497
||| | ||||| | | ||||| || |||||||| | |||||| ||||||||||
Sbjct 820 GGGCGTGGCTCGCGGCTTAGTTGCTCCTTTAGTGGCTCTACATGATTCGAATAGACATGA 761
Query 118498 GCATCCCCAATTGTATGTATGAATTCACCAGGTGTAAGCCCTGTCAGGTGAGCAATCATG 118557
||||| || | || || | || ||||||||| | ||| || | || || ||||||
Sbjct 760 GCATCGCCCAAGGTGTGCACAAAGTCACCAGGTTTGTACCCAGTGACATGGGCGATCATG 701
Query 118558 TATGTCAACAAACTGTAGCTGGCTACATTAAAAGGAACACCCAGACCCATGTCTGCTGAT 118617
|| || | || ||| || | ||||| ||||| || || |||||||| ||
Sbjct 700 TAGGTGAGCAGTGCATAGGATGCAATGTTAAAGGGAACGCCGAGTCCCATGTCCGCACTG 641
Query 118618 CTCTGGTACAATTGGCAAGAGAGCTCCCC------GTTTGCAACATAAAACTGACTTATG 118671
| ||| |||| || || ||||| || || | || ||||||||||| | |
Sbjct 640 CGCTGATACAGCTGACACGAGAGTTCACCACGAGACTGTGAGACATAAAACTGCGCCAGG 581
Query 118672 ATGTGACATGGAGGCAGAACCAT 118694
||| || || |||||| ||||
Sbjct 580 CAGTGGCACGGCGGCAGAGCCAT 558
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 414233992625788
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |