Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04] 48,067 sequences; 123,674,749 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq6480 96.9 3e-15 >seq6480 Length=6706 Score = 96.9 bits (106), Expect = 3e-15 Identities = 215/323 (67%), Gaps = 6/323 (2%) Strand=Plus/Minus Query 118378 TCTTCAAACTTAAAGTCTTCTATATTTTTGATATCCTTGTTTATGGATAGTGTGGGAAAC 118437 ||||||| | || ||||| |||||||||| | | || | || |||||||| Sbjct 880 TCTTCAATGGTGAAATCTTCGATATTTTTGACCTGCCGCTTGAACTGAAGCTTGGGAAAC 821 Query 118438 GGGAGAGGCTCCCTTGTGAGTTGGAGTTTCAGTGGCTCAATGTGATTCATATAGACATGA 118497 ||| | ||||| | | ||||| || |||||||| | |||||| |||||||||| Sbjct 820 GGGCGTGGCTCGCGGCTTAGTTGCTCCTTTAGTGGCTCTACATGATTCGAATAGACATGA 761 Query 118498 GCATCCCCAATTGTATGTATGAATTCACCAGGTGTAAGCCCTGTCAGGTGAGCAATCATG 118557 ||||| || | || || | || ||||||||| | ||| || | || || |||||| Sbjct 760 GCATCGCCCAAGGTGTGCACAAAGTCACCAGGTTTGTACCCAGTGACATGGGCGATCATG 701 Query 118558 TATGTCAACAAACTGTAGCTGGCTACATTAAAAGGAACACCCAGACCCATGTCTGCTGAT 118617 || || | || ||| || | ||||| ||||| || || |||||||| || Sbjct 700 TAGGTGAGCAGTGCATAGGATGCAATGTTAAAGGGAACGCCGAGTCCCATGTCCGCACTG 641 Query 118618 CTCTGGTACAATTGGCAAGAGAGCTCCCC------GTTTGCAACATAAAACTGACTTATG 118671 | ||| |||| || || ||||| || || | || ||||||||||| | | Sbjct 640 CGCTGATACAGCTGACACGAGAGTTCACCACGAGACTGTGAGACATAAAACTGCGCCAGG 581 Query 118672 ATGTGACATGGAGGCAGAACCAT 118694 ||| || || |||||| |||| Sbjct 580 CAGTGGCACGGCGGCAGAGCCAT 558 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414233992625788