Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04] 48,067 sequences; 123,674,749 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq7704 86.0 4e-12 >seq7704 Length=29863 Score = 86.0 bits (94), Expect = 4e-12 Identities = 167/245 (68%), Gaps = 10/245 (4%) Strand=Plus/Plus Query 27777 ACACAATAGTAAAATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGA 27836 ||| || |||| ||||| || || || ||||| || || || || || || |||| Sbjct 18337 ACAGAAGAGTACGATGCAGATCTTCGTTAAAACCCTCACGGGTAAGACCATCACTCTTGA 18396 Query 27837 TGTCGAAAGCACCGACGATGTACAATCG-----GTCAAACAAAAAATAGCCGACAAAGAA 27891 |||||| ||| || ||| |||| |||||| || || ||||||||| Sbjct 18397 GGTCGAA----CCGTCGGA-TACCATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAA 18451 Query 27892 GGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGC 27951 || |||| || ||||| || || || ||||| || || |||||||| || | ||| Sbjct 18452 GGAATTCCTCCAGATCAGCAGCGTTTGATCTTTGCTGGCAAGCAATTGGAAGATGGCCGC 18511 Query 27952 AGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGT 28011 | | |||||||||||||| || |||||| || ||||| ||||| | || | ||| Sbjct 18512 ACTCTCTCCGATTACAACATTCAGAAAGAGTCAACATTGCACTTGGTGCTCCGCCTTCGT 18571 Query 28012 GGCGG 28016 || || Sbjct 18572 GGTGG 18576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355653929912109