Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04] 48,067 sequences; 123,674,749 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq7704 158 3e-33 seq2274 145 2e-29 seq355 120 7e-22 >seq7704 Length=29863 Score = 158 bits (174), Expect = 3e-33 Identities = 168/222 (76%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | || || | ||| | || |||||||| || ||||| ||||| | || || Sbjct 18571 ACGAAGGCGGAGCACCAAGTGCAATGTTGACTCTTTCTGAATGTTGTAATCGGAGAGAGT 18512 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | |||||||||| |||||||| || ||||| | || || || || ||||||| ||| Sbjct 18511 GCGGCCATCTTCCAATTGCTTGCCAGCAAAGATCAAACGCTGCTGATCTGGAGGAATTCC 18452 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||| |||||||| ||||| ||| || ||||||||||| || || ||| ||||| || Sbjct 18451 TTCTTTGTCCTGAATCTTGGCTTTGACATTTTCGATGGTATCCGACGGTTCGACCTCAAG 18392 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 |||||| ||||| |||||||| || || || || | |||||| Sbjct 18391 AGTGATGGTCTTACCCGTGAGGGTTTTAACGAAGATCTGCAT 18350 >seq2274 Length=37031 Score = 145 bits (160), Expect = 2e-29 Identities = 161/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| || || ||||| || |||||||| || || | ||| || | ||||| Sbjct 30370 AGCACCAAGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGACCATCC 30311 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| |||||||| || || || || || ||||||| || ||||||||| Sbjct 30310 TCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGAATACCCTCCTTGTCC 30251 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || || ||||| ||||| || ||||| | ||||| ||| Sbjct 30250 TGGATCTTGGCCTTGACATTCTCAATGGTATCAGATGGCTCCACCTCCAAGGTGATGGTC 30191 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || || || | ||||| || || | ||||||||| Sbjct 30190 TTGCCAGTCAAGGTCTTGACGAAAATCTGCATTTT 30156 >seq355 Length=9390 Score = 120 bits (132), Expect = 7e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 || |||||||| || |||| || || | ||||| ||||||||||| || ||||| || Sbjct 9390 TTCTGGATGTTGTAGTCCGACAGAGTACGGCCATCCTCCAGCTGCTTTCCGGCGAAAATG 9331 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 || || || || || || || | || |||||||| ||||| || ||||| || || Sbjct 9330 AGACGCTGCTGATCTGGGGGGATACCCTCCTTGTCTTGGATTTTAGCCTTCACATTCTCA 9271 Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAAC 211106 |||||||| || |||||| || | |||||| ||||| || || | || || ||||| Sbjct 9270 ATGGTGTCGGAAGGTTCAACTTCCAAAGTGATGGTCTTGCCAGTCAATGTTTTCACAAAG 9211 Query 211107 ACCTGCATTTT 211117 | ||||||||| Sbjct 9210 ATCTGCATTTT 9200 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1158438126460455