Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq7704 156 3e-33
seq355 87.8 1e-12
seq2274 86.0 4e-12
>seq7704
Length=29863
Score = 156 bits (172), Expect = 3e-33
Identities = 160/209 (77%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| |||||||||||||||||||| || || |||||||| || || || | ||
Sbjct 18350 ATGCAGATCTTCGTTAAAACCCTCACGGGTAAGACCATCACTCTTGAGGTCGAACCGTCG 18409
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
|| || | |||| | ||| || ||| ||||||||||| | || ||||||||
Sbjct 18410 GATACCATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAAGGAATTCCTCCAGATCAG 18469
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
|||||||| || ||||| ||||| ||| ||||||| | |||||| | ||||||||||
Sbjct 18470 CAGCGTTTGATCTTTGCTGGCAAGCAATTGGAAGATGGCCGCACTCTCTCCGATTACAAC 18529
Query 23791 ATACAAAAAGAGTCCACATTACATTTAGT 23819
|| || |||||||| ||||| || || ||
Sbjct 18530 ATTCAGAAAGAGTCAACATTGCACTTGGT 18558
>seq355
Length=9390
Score = 87.8 bits (96), Expect = 1e-12
Identities = 141/200 (71%), Gaps = 2/200 (1%)
Strand=Plus/Plus
Query 23600 AATTACTTAAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAG 23659
|| || | ||||||||||| || || ||||| | || || || || |||||| | ||||
Sbjct 9192 AAATATTGAAAATGCAGATCTTTGTGAAAACATTGACTGGCAAGACCATCACTTTGGAAG 9251
Query 23660 TTGACTCCACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTA 23718
|||| | | ||||| |||| ||| | || | ||||| ||||| || ||| |
Sbjct 9252 TTGAACCTTCCGACACCATTGAGAATGTGAAGGC-TAAAATCCAAGACAAGGAGGGTATC 9310
Query 23719 CCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTA 23778
|| |||||||| |||||| | || || ||||| || || ||||| || | || ||| |
Sbjct 9311 CCCCCAGATCAGCAGCGTCTCATTTTCGCCGGAAAGCAGCTGGAGGATGGCCGTACTCTG 9370
Query 23779 GGCGATTACAACATACAAAA 23798
|| |||||||| || ||
Sbjct 9371 TCGGACTACAACATCCAGAA 9390
>seq2274
Length=37031
Score = 86.0 bits (94), Expect = 4e-12
Identities = 141/201 (70%), Gaps = 2/201 (1%)
Strand=Plus/Plus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
||||||||||||||||| || ||| | || || || || ||||| | || || || |
Sbjct 30156 AAAATGCAGATTTTCGTCAAGACCTTGACTGGCAAGACCATCACCTTGGAGGTGGAGCCA 30215
Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726
| || || |||| ||| | || | || || ||||| || ||| | || |||||
Sbjct 30216 TCTGATACCATTGAGAATGTCAAGGC-CAAGATCCAGGACAAGGAGGGTATTCCTCCAGA 30274
Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786
||| |||||| | || || || ||||| || ||||| || | |||||| | || ||
Sbjct 30275 TCAGCAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGTCGCACTCTTTCTGACTA 30334
Query 23787 CAACATACAAAAAGAGTCCAC 23807
|||||| || || ||||| ||
Sbjct 30335 CAACATCCAGAAGGAGTCAAC 30355
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 337811588378036
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |