Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq6480 125 5e-24
>seq6480
Length=6706
Score = 125 bits (138), Expect = 5e-24
Identities = 172/238 (72%), Gaps = 8/238 (3%)
Strand=Plus/Minus
Query 27138 CTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTC 27197
||| || || || || |||| | ||||| ||||| || |||| |||||| ||||| ||
Sbjct 794 CTTTAGTGGCTCTACATGATTCGAATAGACATGAGCATCGCCCAAGGTGTGCACAAAGTC 735
Query 27198 TCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGAT 27257
|| |||| ||| ||||| || || |||||||| ||||| || | ||| || ||
Sbjct 734 ACCAGGTTTGTACCCAGTGACATGGGCGATCATGTAGGTGAGCAGTGCATAGGATGCAAT 675
Query 27258 GTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTC 27317
||||||||| || ||||| ||||||||| | | ||| || |||||||||||||| ||
Sbjct 674 GTTAAAGGGAACGCCGAGTCCCATGTCCGCACTGCGCTGATACAGCTGACACGAGAGTTC 615
Query 27318 TCCATCG---CT----TACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCAT 27368
||| || || || |||||||| | | ||||||||| || ||||||||
Sbjct 614 ACCA-CGAGACTGTGAGACATAAAACTGCGCCAGGCAGTGGCACGGCGGCAGAGCCAT 558
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369290736562277
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |