Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04] 48,067 sequences; 123,674,749 total letters Query= NC_030931.1 Length=41871 Score E Sequences producing significant alignments: (Bits) Value seq36792 163 8e-36 >seq36792 Length=516 Score = 163 bits (180), Expect = 8e-36 Identities = 149/188 (79%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 26995 CCGGAGAACACCGCGAAGCCGTACAGCAGCATCACGTTCGGCACCAAGATCACCCCGGTG 27054 || || || ||| |||||||||||||| ||| |||| |||||||| ||||| Sbjct 515 CCAGAAAATACCACGAAGCCGTACAGCGATATCCAATTCGCTGAAAAGATCACGCCGGTT 456 Query 27055 ACCACCATCGCGCACATGTTCAAGGCGTCCAAGCAGATCCTTGATGACTTCGCTCAACTG 27114 ||| | || || |||||||| || ||||||||||| || ||||||||||| || ||| Sbjct 455 CGCACGTTGGCACATATGTTCAAAGCCTCCAAGCAGATTCTGGATGACTTCGCACAGCTG 396 Query 27115 CAGTCGACCGTGGACACCGAGATGCGCTTCGGCCTGAAGTATGTCGAAGAGCAGGAGATC 27174 || |||||| | || | |||||||| | |||||||||||||||||||||||||||||| Sbjct 395 CAATCGACCATTGATGCAGAGATGCGTTACGGCCTGAAGTATGTCGAAGAGCAGGAGATT 336 Query 27175 CTGTTCGG 27182 |||||||| Sbjct 335 CTGTTCGG 328 Score = 98.7 bits (108), Expect = 3e-16 Identities = 111/146 (76%), Gaps = 2/146 (1%) Strand=Plus/Minus Query 27351 GGCGAAGATCGAGCTGACCAAGGACACCCTGGGCCGCTACATCCTCGCCAA-CCCGCTGG 27409 ||| | ||| |||||| ||||||| | ||||||||||| ||||||||||| || || | Sbjct 155 GGCCACGATTGAGCTGCTCAAGGACTCGCTGGGCCGCTATATCCTCGCCAATCCAGCAGC 96 Query 27410 GCCTGGCCGGCCCGCTGCTGTGGGGCCTGCCGGTGGTTGCCACTGAAATCGCCGCGTTCC 27469 | || |||||||| || |||||| |||| || || || || || || ||||||| Sbjct 95 G-CTAACCGGCCCGACTCTCTGGGGCTTGCCTGTTGTCGCGACGGAGTCAGCGGCGTTCC 37 Query 27470 AGGGCAAGTTCCTGACTGGTGCGTTC 27495 ||| || |||||||| ||||| ||| Sbjct 36 TGGGTAAATTCCTGACCGGTGCTTTC 11 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133789190101182