Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04] 48,067 sequences; 123,674,749 total letters Query= NC_031007.1 Length=223935 Score E Sequences producing significant alignments: (Bits) Value seq44159 194 2e-44 >seq44159 Length=807 Score = 194 bits (214), Expect = 2e-44 Identities = 395/586 (67%), Gaps = 46/586 (8%) Strand=Plus/Minus Query 88182 GCAACTCATCTTCTCCACAGGGGAAGCCGGATGCGGTAAGACCTTCATGGCCACCGCCTA 88241 ||| || |||||| |||| || |||||||| | || || || ||||| | ||||| | Sbjct 792 GCAGCTGATCTTCGCCACCGGCGAAGCCGGCGGTGGCAAAACATTCATCAGCGCCGCCAA 733 Query 88242 CGCGGTAGAG-CGATTACTGGCCAAAGACGTCGATCGTATCATTGTCACTCGCCCTGTCC 88300 |||| ||| || | | | ||||| || ||||| || || || || || ||||| Sbjct 732 GGCGGCGGAGGCGCTGA-TCCATAAAGAGGTGGATCGGATTATCGTTACCCGTCCTGTTT 674 Query 88301 TCTCCGCAGATGAAGACTTAGGCTTCCTGCCGGGCGATGTTGGTGAAAAGTTCGCGCCTT 88360 | || ||||||||| | || ||| ||||||| ||| | || |||||||| |||| Sbjct 673 TGCAGGCGGATGAAGACCTCGGTTTCTTGCCGGGGGATATCTCCGAGAAGTTCGCCCCTT 614 Query 88361 ACTTCCGACCTGTTTACGATGTGCTCTTAAAACGTCTGGGCAGC--CGTTTCTTACAATA 88418 | ||||| || || || || | || || ||| | || | | | ||| || || || Sbjct 613 ATTTCCGCCCGGTGTATGACATTCTGGTACGTCGTTTAGG-ATCTTCCTTT-TTGCAGTA 556 Query 88419 CTGCCTGAAACCGGGTATAGACAAGGTTGAGATAGCTCCCTTCGCC-------------- 88464 ||||||| |||| || | |||||| ||||| || || ||||| Sbjct 555 CTGCCTGCGCCCGGAAATCGGCAAGGTAGAGATTGCGCCGTTCGCNNNNNNNNNNNNNNN 496 Query 88465 --------------------TATATGCGTGGCCGCAACTTCGAGAACGCGGTCGTTATCT 88504 |||||||| || |||| |||||| || |||||||||||| Sbjct 495 NNNNNNNNNNNNNNNNNNNNTATATGCGCGGACGCACCTTCGAAAATGCGGTCGTTATCC 436 Query 88505 TAGATGAAGCTCAGAACACCACTGCTCAGC-AGATGAAGCTCTTCCTGACCCGTATCGGG 88563 | |||||||| |||||| || || |||| ||||||| | ||||||||||| | ||| Sbjct 435 TGGATGAAGCCCAGAACGTGACCGC-CAGCCAGATGAAAATGTTCCTGACCCGCCTGGGG 377 Query 88564 GAGAACTGTATCGTTATCGTTAACGGTGACGTCACTCAGTGCGACTTACCTTCCGGGGTG 88623 || ||| | |||||||||||||| ||||| || ||||||||| | || ||| ||| Sbjct 376 GAAAACGTGACGGTTATCGTTAACGGCGACGTGACCCAGTGCGACCTGCCGCGCGGCGTG 317 Query 88624 AAGTCGGGACTGGCCGACGCATTAGCCCGTTTCGAAGAAGACGAATTAGTCGGCATCGTT 88683 || || || || ||| || | | || |||||||| ||||| | ||||| | | Sbjct 316 AAATCCGGTCTCAGCGATGCCCTGGAGCGCTTCGAAGAGGACGAGATGATCGGCGTTATC 257 Query 88684 CGTTTTACGAAAGATGACTGTGTGCGCTCTCCGCTTTGT--CAGCG 88727 || ||| ||| | ||||| ||||| ||||||||||| ||||| Sbjct 256 CGCTTTGAAAAACAGGACTGCGTGCG--CTCCGCTTTGTGCCAGCG 213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716033521561400