Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04] 48,067 sequences; 123,674,749 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq2144 594 7e-165 seq19922 174 2e-38 >seq2144 Length=13752 Score = 594 bits (658), Expect = 7e-165 Identities = 1265/1880 (67%), Gaps = 18/1880 (1%) Strand=Plus/Minus Query 76769 ATTCTTATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACAT 76828 ||||||||| | ||||||||||| | | | ||| || || || || ||||| ||||| Sbjct 4935 ATTCTTATCTACAGTAAACTGAATAGCATTGGCTGCCGGCTTAGTGCGAAGATAATACAT 4876 Query 76829 ACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACT 76888 || ||||| |||||| |||| | ||||||| ||| |||||| || |||| | Sbjct 4875 TCCTGTTTTAAGACCCGCTTTCCAGGAGAAGAAATGAATGGATGTCAGCTTACCATAATT 4816 Query 76889 AGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGC 76948 || || |||| ||||||||| | || ||||||||||| ||||||||||| | ||| || Sbjct 4815 TGGTTCAGCTACATGAATATTAAAGGATTGACTTTGATCAATGAAAGCTCCACGATCTGC 4756 Query 76949 CGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGAT 77008 |||||||| || ||| |||| | |||||||||| || || | | || | Sbjct 4755 TGCCATTTTGATTGTGGACTTTACGGATATTTCCCAAACGGTCTTATATAGTTCACGCAC 4696 Query 77009 ATCATCTGGAAGGTTTG---TATTTTGAATGGAACCACCATCTGATATAATTGTATTCTT 77065 || | |||| |||| | ||||| ||||| |||| | || || ||| ||| || Sbjct 4695 ATTTTGAGGAATGTTTTCGATGTTTTGTATGGAGCCACGACTTGCGATTATTTGATTTTT 4636 Query 77066 TATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTAT 77125 |||||||||| |||||| | | || |||| | | | | | |||| |||| || | Sbjct 4635 CATATCATCATCCCACAAGTCCAGTTCGGTTAGATCACGCAACAAATGATGATTCACAAC 4576 Query 77126 TTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGA 77185 ||||| |||||||||| |||| | ||||| || || || || ||||| | ||| Sbjct 4575 CTGAAACTCTCCAGACAGCACTCGTCTTGTGTAGATGTTTGAAGTGTAGGGTTCGAAAGA 4516 Query 77186 TTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACT 77245 |||||| || |||| || || || || || || |||||||| ||||| | | | | Sbjct 4515 TTCATTATTACCCATTATCTGGGCTGTCGATGCCGTTGGCATTGGTGCGATAAGCAGAGA 4456 Query 77246 ATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGA 77305 ||| | | || || | || || || || || || | ||| ||||| |||| || Sbjct 4455 ATTACGCACTCCGTGCTTGCTTATCTTCTCCTTGAGTTTCGCCCAGTCCCAGAGATTTGT 4396 Query 77306 AGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCATTATA 77365 ||||| || ||| | ||| || || ||||| || || ||| | ||| | ||| Sbjct 4395 GGGTACCTTATTCCACATATCATACTGGAGAATACCCTTGCTAACTGGACTTCCCTCATA 4336 Query 77366 TGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATA 77425 || ||||| | || ||| | ||||| || ||||| || ||||||||||| || || || Sbjct 4335 GGTCTCATACGTGCCATCTTTCTCAGCCAGCTCACAGCTGGCTTCCAATGCGCCATAGTA 4276 Query 77426 AATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATAATG 77485 ||| |||||||| |||| | ||| ||| || | | ||| ||| | ||||| | Sbjct 4275 AATGGTTTCGAATATCTGTTGATTCAGAAGACACGCCTTATCACTCTCATAGGGATACCG 4216 Query 77486 TAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTT 77545 | | ||| || |||||||| | ||| ||||||||||| ||||| || | |||||| Sbjct 4215 CATTAAAATCAAAGCATCTGCAAGTCCTTGAACTCCAATTCCAATTGGACGATGTCTTAA 4156 Query 77546 ATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATT 77605 ||||| | ||||| || || | ||| || ||||| || || || || || || | || Sbjct 4155 GTTGGATTTCTTAGCCTCGGGCAGAGGGTAGTAATTGATATCGATGATCTTGTTCAAGTT 4096 Query 77606 TCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAA--TCTTC-CATCTAT 77662 | | ||| | || || || || || || | ||| || | ||||| | | | Sbjct 4095 TTTGGTAACAATCTTGGTGACCTCTTTGAGCTTCACAAAGTCGTACGTCTTCTCCGGTGT 4036 Query 77663 AACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGCGTTGGC 77722 || ||||| || | |||||| ||||| | ||| ||||| || | ||||| | | Sbjct 4035 TACGAACATATTGAGAGCTATCGATGCCAAATTGCAAACAGCAATCTCATCTGGTGCAGA 3976 Query 77723 ATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTT 77782 ||| | | || || || || | ||||| ||||| || ||||||| |||||||||||| Sbjct 3975 ATACTCAACAATTTCAGTGCACAAGTTACTGCATTTAATTGTGCCCACATTTTGTTGGTT 3916 Query 77783 GCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGA 77842 |||||| || || || ||||| | || || |||| || || || || | ||||| Sbjct 3915 GCTCTTGCGGTTACACGAATCCTTGAAGAGCATGTACGGTGTGCCAGTCTCCACTTGTGA 3856 Query 77843 TTCGATAATAGATTTCCAGACGACTCTAGCTTTTATCATA-GATTTGTATCGCCTCTCTC 77901 || || || | ||| | | | ||| || || | | |||||| ||| | ||| Sbjct 3855 CTCAATGATGGCAAACCAAAGGGATTGAGCCTTGATAACACGATTTGC-TCGACCCTCCT 3797 Query 77902 TTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGC 77961 | || |||| ||||| ||| ||||| | ||| |||||||||||| | | ||| || | Sbjct 3796 TCTCGTATTTTGTATAGAGCTCCTCAAACTTATCACCCCAAACATCAGCGAGTCCTGGAC 3737 Query 77962 ATTCATTTGGGCACATCAATGACCAGTCACCAT---CTTCCTTAACTCGTTTCATAAAGA 78018 | | | |||||||||| |||||| || ||| ||||| || || |||||||| | Sbjct 3736 ACTTGTGCGGGCACATCAGTGACCAATCCTCATTGGCTTCC---ACGCGCTTCATAAACA 3680 Query 78019 GATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTAT 78078 ||| |||||||| || ||| || ||||| || | | |||||| || || || || | Sbjct 3679 AATCTGGTATCCACAGGGCATAGAACAGATCCCGAGCACGATGTTCCTCTTTGCCAGTGT 3620 Query 78079 TCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCA 78138 |||| |||||||| | ||||| | | ||| |||||||| || || || || || || | Sbjct 3619 TCTTCTTAAGATCCAAGAACTCAAAGACATCGGAATGCCAAGGCTCGAGGTAAATGGCAA 3560 Query 78139 TAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTC 78198 | ||||||||| ||| || |||||||| | ||| | || || ||| | |||| Sbjct 3559 AAGCTCCAGGTCTTTTGCCGCCACCCTGATCCACATAACGTGCCACATTGTTAAATACTC 3500 Query 78199 TCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTG 78258 ||| ||| |||| | || || ||||| ||||| || ||| ||| || |||| | | Sbjct 3499 TCAGCATAGGAACCAAGCCATTGGATGTACCATTGGTGCCACTAATCGAAGTTCCCTTGG 3440 Query 78259 CGCGAAT--ATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCA 78316 | ||||| | | | || | | || || || ||||| ||| || || | || || Sbjct 3439 CCCGAATGCAATGCACATTCAGA--CCAATACCACCTGCTGACTTTGAGATCATCGCACA 3382 Query 78317 ACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACA 78376 | | || | | |||| ||||| || |||| | |||| | || ||||| || Sbjct 3381 CTGCTCCACAGATTTAAAGATTCCCTCGATTGAGTCAGATACCATGGTGAGGAGAAAGCA 3322 Query 78377 GCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAA 78436 ||||| ||| | | ||| | || || | ||| || || ||||| || || Sbjct 3321 TGAAGACAGCTGAGGGCGTGTGGTTGCAGCTGCGAAAAGTGTTGGTGAGGCATGTGTGAA 3262 Query 78437 CCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAAT 78496 | ||| ||||| | |||||| || || | || || || || || | ||| || Sbjct 3261 GAAGCGTTCCGAAAGCAAATTGTAAGTCTCCAGTGCGGAATCAATATCATCTCCATGTAT 3202 Query 78497 TCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTT 78556 || | || || ||||||| ||| ||||| || | |||| | || ||| ||||| Sbjct 3201 ACCGATGGCAACTCGCATCAGCATGTGCTGTGGACGTTCAGCAACTTTGCCATTGATTTT 3142 Query 78557 CAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTC 78616 ||||| || ||| |||||||| || || |||||||| || || ||| || | || Sbjct 3141 TAACAAATACGATCGCTCCAAAGTCTTGAATCCAAAATAATTATAGCCAAAATCACGATC 3082 Query 78617 GTAAATAATAACAGAATTTA 78636 ||| ||||| |||| |||| Sbjct 3081 GTATATAATGGCAGAGTTTA 3062 >seq19922 Length=1369 Score = 174 bits (192), Expect = 2e-38 Identities = 436/656 (66%), Gaps = 11/656 (2%) Strand=Plus/Minus Query 48027 AGTTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACTATT 48086 || || ||||||||||| || ||||| || || || || || | ||||||||| || Sbjct 1331 AGATTGACTGGTAGAGCGTCTGTAAGGAATTCCTGCTCTATCTTCACAGCATCCGAGATG 1272 Query 48087 ATC--GATGTTACCGTTTCCTCACTTGGTGGATACAACAAATGTTTAAACATTAA-ACAT 48143 ||| |||| | | | | ||| || | | | ||| || | ||||| | ||| Sbjct 1271 ATCTCGATGATGCGCTCACG--ACTGGGACGCTGTACCAAGTGCTGGAACATAAGCACA- 1215 Query 48144 GCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCG 48203 |||||||| |||||||| || || || | || | || || || || || |||||| Sbjct 1214 GCAAAATCGCAATGAAGTCCCTCGTCGCGGGAGATCAGCTCATTCGAGAAGGTAAGACCG 1155 Query 48204 GGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATG 48263 ||||| || ||||| || || ||||| || || | ||| ||| || ||||| ||| Sbjct 1154 GGCATAAGACCACGCTTCTTCAGCCAGAAGATCGACGCAAAACTGCCGCTGAAGAAGATG 1095 Query 48264 CCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCC----GTAACTGGCTTCGTTGTGTAT 48319 ||||| || || ||||| || | | | ||| || | | | ||||| | | || Sbjct 1094 CCTTCGACAGCAGCAAAGGCAATGATGCGCTCGCCAAAGTTTGCCGCCTTCGAGGAG-AT 1036 Query 48320 CCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAA 48379 ||| | |||||||| ||||| ||| ||| ||||| ||||| || ||||| || Sbjct 1035 CCAAGACAGAGCCCAATCTGCCTTACGCTTCACAGCGGGCATCGTTTCAATGGCATTGAA 976 Query 48380 GAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTC 48439 ||| ||| | || ||| || |||||| || || | | || |||||||| Sbjct 975 GAGGTAGTCGCGCTGATGCGGATCCCGAATGTAAGTGTCGATGAGCACGCTGTACATTTC 916 Query 48440 GGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTG 48499 ||||| | ||| || || || ||||| || || ||||| || | || |||||||| || Sbjct 915 CGAGTGGACATTCTCCATGGCAATCTGGAAGCCATAAAAGCAACGTGCCTCTGTGATTTG 856 Query 48500 TACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAA 48559 || ||| | || || || | | ||||||||| || || || ||| || ||||| Sbjct 855 CACTTCCTGGCTGAAGCGCTCGACAAGATTCTCATTAACAATGCCGTCAGAGGCGGCAAA 796 Query 48560 AAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTATTCCAGTCATT 48619 || || || |||||| ||| || | || ||| || ||| | |||||| | Sbjct 795 GAAAGCCAAAACATGTGAAATGAAGTGACGCTCATTGTCTGTTAGTCGAGCCCAGTCGGT 736 Query 48620 GATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTT 48675 || || || |||| ||| ||||| || | ||||| ||||| || || || |||| Sbjct 735 CATGTCCTTGGATAGATCCACTTCCTCCACGGTCCAGAATGAAGCTTCGGCCTTTT 680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694251416934880