Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq2144 594 7e-165
seq19922 174 2e-38
>seq2144
Length=13752
Score = 594 bits (658), Expect = 7e-165
Identities = 1265/1880 (67%), Gaps = 18/1880 (1%)
Strand=Plus/Minus
Query 76769 ATTCTTATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACAT 76828
||||||||| | ||||||||||| | | | ||| || || || || ||||| |||||
Sbjct 4935 ATTCTTATCTACAGTAAACTGAATAGCATTGGCTGCCGGCTTAGTGCGAAGATAATACAT 4876
Query 76829 ACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACT 76888
|| ||||| |||||| |||| | ||||||| ||| |||||| || |||| |
Sbjct 4875 TCCTGTTTTAAGACCCGCTTTCCAGGAGAAGAAATGAATGGATGTCAGCTTACCATAATT 4816
Query 76889 AGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGC 76948
|| || |||| ||||||||| | || ||||||||||| ||||||||||| | ||| ||
Sbjct 4815 TGGTTCAGCTACATGAATATTAAAGGATTGACTTTGATCAATGAAAGCTCCACGATCTGC 4756
Query 76949 CGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGAT 77008
|||||||| || ||| |||| | |||||||||| || || | | || |
Sbjct 4755 TGCCATTTTGATTGTGGACTTTACGGATATTTCCCAAACGGTCTTATATAGTTCACGCAC 4696
Query 77009 ATCATCTGGAAGGTTTG---TATTTTGAATGGAACCACCATCTGATATAATTGTATTCTT 77065
|| | |||| |||| | ||||| ||||| |||| | || || ||| ||| ||
Sbjct 4695 ATTTTGAGGAATGTTTTCGATGTTTTGTATGGAGCCACGACTTGCGATTATTTGATTTTT 4636
Query 77066 TATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTAT 77125
|||||||||| |||||| | | || |||| | | | | | |||| |||| || |
Sbjct 4635 CATATCATCATCCCACAAGTCCAGTTCGGTTAGATCACGCAACAAATGATGATTCACAAC 4576
Query 77126 TTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGA 77185
||||| |||||||||| |||| | ||||| || || || || ||||| | |||
Sbjct 4575 CTGAAACTCTCCAGACAGCACTCGTCTTGTGTAGATGTTTGAAGTGTAGGGTTCGAAAGA 4516
Query 77186 TTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACT 77245
|||||| || |||| || || || || || || |||||||| ||||| | | | |
Sbjct 4515 TTCATTATTACCCATTATCTGGGCTGTCGATGCCGTTGGCATTGGTGCGATAAGCAGAGA 4456
Query 77246 ATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGA 77305
||| | | || || | || || || || || || | ||| ||||| |||| ||
Sbjct 4455 ATTACGCACTCCGTGCTTGCTTATCTTCTCCTTGAGTTTCGCCCAGTCCCAGAGATTTGT 4396
Query 77306 AGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCATTATA 77365
||||| || ||| | ||| || || ||||| || || ||| | ||| | |||
Sbjct 4395 GGGTACCTTATTCCACATATCATACTGGAGAATACCCTTGCTAACTGGACTTCCCTCATA 4336
Query 77366 TGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATA 77425
|| ||||| | || ||| | ||||| || ||||| || ||||||||||| || || ||
Sbjct 4335 GGTCTCATACGTGCCATCTTTCTCAGCCAGCTCACAGCTGGCTTCCAATGCGCCATAGTA 4276
Query 77426 AATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATAATG 77485
||| |||||||| |||| | ||| ||| || | | ||| ||| | ||||| |
Sbjct 4275 AATGGTTTCGAATATCTGTTGATTCAGAAGACACGCCTTATCACTCTCATAGGGATACCG 4216
Query 77486 TAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTT 77545
| | ||| || |||||||| | ||| ||||||||||| ||||| || | ||||||
Sbjct 4215 CATTAAAATCAAAGCATCTGCAAGTCCTTGAACTCCAATTCCAATTGGACGATGTCTTAA 4156
Query 77546 ATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATT 77605
||||| | ||||| || || | ||| || ||||| || || || || || || | ||
Sbjct 4155 GTTGGATTTCTTAGCCTCGGGCAGAGGGTAGTAATTGATATCGATGATCTTGTTCAAGTT 4096
Query 77606 TCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAA--TCTTC-CATCTAT 77662
| | ||| | || || || || || || | ||| || | ||||| | | |
Sbjct 4095 TTTGGTAACAATCTTGGTGACCTCTTTGAGCTTCACAAAGTCGTACGTCTTCTCCGGTGT 4036
Query 77663 AACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGCGTTGGC 77722
|| ||||| || | |||||| ||||| | ||| ||||| || | ||||| | |
Sbjct 4035 TACGAACATATTGAGAGCTATCGATGCCAAATTGCAAACAGCAATCTCATCTGGTGCAGA 3976
Query 77723 ATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTT 77782
||| | | || || || || | ||||| ||||| || ||||||| ||||||||||||
Sbjct 3975 ATACTCAACAATTTCAGTGCACAAGTTACTGCATTTAATTGTGCCCACATTTTGTTGGTT 3916
Query 77783 GCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGA 77842
|||||| || || || ||||| | || || |||| || || || || | |||||
Sbjct 3915 GCTCTTGCGGTTACACGAATCCTTGAAGAGCATGTACGGTGTGCCAGTCTCCACTTGTGA 3856
Query 77843 TTCGATAATAGATTTCCAGACGACTCTAGCTTTTATCATA-GATTTGTATCGCCTCTCTC 77901
|| || || | ||| | | | ||| || || | | |||||| ||| | |||
Sbjct 3855 CTCAATGATGGCAAACCAAAGGGATTGAGCCTTGATAACACGATTTGC-TCGACCCTCCT 3797
Query 77902 TTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGC 77961
| || |||| ||||| ||| ||||| | ||| |||||||||||| | | ||| || |
Sbjct 3796 TCTCGTATTTTGTATAGAGCTCCTCAAACTTATCACCCCAAACATCAGCGAGTCCTGGAC 3737
Query 77962 ATTCATTTGGGCACATCAATGACCAGTCACCAT---CTTCCTTAACTCGTTTCATAAAGA 78018
| | | |||||||||| |||||| || ||| ||||| || || |||||||| |
Sbjct 3736 ACTTGTGCGGGCACATCAGTGACCAATCCTCATTGGCTTCC---ACGCGCTTCATAAACA 3680
Query 78019 GATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTAT 78078
||| |||||||| || ||| || ||||| || | | |||||| || || || || |
Sbjct 3679 AATCTGGTATCCACAGGGCATAGAACAGATCCCGAGCACGATGTTCCTCTTTGCCAGTGT 3620
Query 78079 TCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCA 78138
|||| |||||||| | ||||| | | ||| |||||||| || || || || || || |
Sbjct 3619 TCTTCTTAAGATCCAAGAACTCAAAGACATCGGAATGCCAAGGCTCGAGGTAAATGGCAA 3560
Query 78139 TAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTC 78198
| ||||||||| ||| || |||||||| | ||| | || || ||| | ||||
Sbjct 3559 AAGCTCCAGGTCTTTTGCCGCCACCCTGATCCACATAACGTGCCACATTGTTAAATACTC 3500
Query 78199 TCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTG 78258
||| ||| |||| | || || ||||| ||||| || ||| ||| || |||| | |
Sbjct 3499 TCAGCATAGGAACCAAGCCATTGGATGTACCATTGGTGCCACTAATCGAAGTTCCCTTGG 3440
Query 78259 CGCGAAT--ATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCA 78316
| ||||| | | | || | | || || || ||||| ||| || || | || ||
Sbjct 3439 CCCGAATGCAATGCACATTCAGA--CCAATACCACCTGCTGACTTTGAGATCATCGCACA 3382
Query 78317 ACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACA 78376
| | || | | |||| ||||| || |||| | |||| | || ||||| ||
Sbjct 3381 CTGCTCCACAGATTTAAAGATTCCCTCGATTGAGTCAGATACCATGGTGAGGAGAAAGCA 3322
Query 78377 GCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAA 78436
||||| ||| | | ||| | || || | ||| || || ||||| || ||
Sbjct 3321 TGAAGACAGCTGAGGGCGTGTGGTTGCAGCTGCGAAAAGTGTTGGTGAGGCATGTGTGAA 3262
Query 78437 CCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAAT 78496
| ||| ||||| | |||||| || || | || || || || || | ||| ||
Sbjct 3261 GAAGCGTTCCGAAAGCAAATTGTAAGTCTCCAGTGCGGAATCAATATCATCTCCATGTAT 3202
Query 78497 TCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTT 78556
|| | || || ||||||| ||| ||||| || | |||| | || ||| |||||
Sbjct 3201 ACCGATGGCAACTCGCATCAGCATGTGCTGTGGACGTTCAGCAACTTTGCCATTGATTTT 3142
Query 78557 CAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTC 78616
||||| || ||| |||||||| || || |||||||| || || ||| || | ||
Sbjct 3141 TAACAAATACGATCGCTCCAAAGTCTTGAATCCAAAATAATTATAGCCAAAATCACGATC 3082
Query 78617 GTAAATAATAACAGAATTTA 78636
||| ||||| |||| ||||
Sbjct 3081 GTATATAATGGCAGAGTTTA 3062
>seq19922
Length=1369
Score = 174 bits (192), Expect = 2e-38
Identities = 436/656 (66%), Gaps = 11/656 (2%)
Strand=Plus/Minus
Query 48027 AGTTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACTATT 48086
|| || ||||||||||| || ||||| || || || || || | ||||||||| ||
Sbjct 1331 AGATTGACTGGTAGAGCGTCTGTAAGGAATTCCTGCTCTATCTTCACAGCATCCGAGATG 1272
Query 48087 ATC--GATGTTACCGTTTCCTCACTTGGTGGATACAACAAATGTTTAAACATTAA-ACAT 48143
||| |||| | | | | ||| || | | | ||| || | ||||| | |||
Sbjct 1271 ATCTCGATGATGCGCTCACG--ACTGGGACGCTGTACCAAGTGCTGGAACATAAGCACA- 1215
Query 48144 GCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCG 48203
|||||||| |||||||| || || || | || | || || || || || ||||||
Sbjct 1214 GCAAAATCGCAATGAAGTCCCTCGTCGCGGGAGATCAGCTCATTCGAGAAGGTAAGACCG 1155
Query 48204 GGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATG 48263
||||| || ||||| || || ||||| || || | ||| ||| || ||||| |||
Sbjct 1154 GGCATAAGACCACGCTTCTTCAGCCAGAAGATCGACGCAAAACTGCCGCTGAAGAAGATG 1095
Query 48264 CCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCC----GTAACTGGCTTCGTTGTGTAT 48319
||||| || || ||||| || | | | ||| || | | | ||||| | | ||
Sbjct 1094 CCTTCGACAGCAGCAAAGGCAATGATGCGCTCGCCAAAGTTTGCCGCCTTCGAGGAG-AT 1036
Query 48320 CCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAA 48379
||| | |||||||| ||||| ||| ||| ||||| ||||| || ||||| ||
Sbjct 1035 CCAAGACAGAGCCCAATCTGCCTTACGCTTCACAGCGGGCATCGTTTCAATGGCATTGAA 976
Query 48380 GAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTC 48439
||| ||| | || ||| || |||||| || || | | || ||||||||
Sbjct 975 GAGGTAGTCGCGCTGATGCGGATCCCGAATGTAAGTGTCGATGAGCACGCTGTACATTTC 916
Query 48440 GGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTG 48499
||||| | ||| || || || ||||| || || ||||| || | || |||||||| ||
Sbjct 915 CGAGTGGACATTCTCCATGGCAATCTGGAAGCCATAAAAGCAACGTGCCTCTGTGATTTG 856
Query 48500 TACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAA 48559
|| ||| | || || || | | ||||||||| || || || ||| || |||||
Sbjct 855 CACTTCCTGGCTGAAGCGCTCGACAAGATTCTCATTAACAATGCCGTCAGAGGCGGCAAA 796
Query 48560 AAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTATTCCAGTCATT 48619
|| || || |||||| ||| || | || ||| || ||| | |||||| |
Sbjct 795 GAAAGCCAAAACATGTGAAATGAAGTGACGCTCATTGTCTGTTAGTCGAGCCCAGTCGGT 736
Query 48620 GATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTT 48675
|| || || |||| ||| ||||| || | ||||| ||||| || || || ||||
Sbjct 735 CATGTCCTTGGATAGATCCACTTCCTCCACGGTCCAGAATGAAGCTTCGGCCTTTT 680
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694251416934880
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