Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04] 48,067 sequences; 123,674,749 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq2144 581 5e-161 seq19922 179 5e-40 >seq2144 Length=13752 Score = 581 bits (644), Expect = 5e-161 Identities = 1260/1878 (67%), Gaps = 14/1878 (1%) Strand=Plus/Minus Query 75364 ATTCTTATCCAACGTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACAT 75423 ||||||||| | || |||||||| | | || ||| || || || || ||||| ||||| Sbjct 4935 ATTCTTATCTACAGTAAACTGAATAGCATTGGCTGCCGGCTTAGTGCGAAGATAATACAT 4876 Query 75424 ACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACT 75483 || ||||| |||||| |||| | ||||||| ||| ||| || || |||| | Sbjct 4875 TCCTGTTTTAAGACCCGCTTTCCAGGAGAAGAAATGAATGGATGTCAGCTTACCATAATT 4816 Query 75484 CGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGC 75543 || || |||| ||||||||| | || ||||||||||| ||||||||||| | ||| || Sbjct 4815 TGGTTCAGCTACATGAATATTAAAGGATTGACTTTGATCAATGAAAGCTCCACGATCTGC 4756 Query 75544 CGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGAT 75603 |||||||| || ||| |||| | |||||||||| || || | | || | Sbjct 4755 TGCCATTTTGATTGTGGACTTTACGGATATTTCCCAAACGGTCTTATATAGTTCACGCAC 4696 Query 75604 ATCATCTGGAAGATTT---GTATTTTGAATGGATCCGCCATCAGATATAATTGTATTCTT 75660 || | |||| ||| | ||||| ||||| || | | | || ||| ||| || Sbjct 4695 ATTTTGAGGAATGTTTTCGATGTTTTGTATGGAGCCACGACTTGCGATTATTTGATTTTT 4636 Query 75661 GATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAAT 75720 || ||||||| |||||| | ||||||| | | | | | |||| |||| |||| Sbjct 4635 CATATCATCATCCCACAAGTCCAGTTCGGTTAGATCACGCAACAAATGATGATTCACAAC 4576 Query 75721 TTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGA 75780 ||||| |||||||||| |||| || ||||| || || || || ||||| | ||| Sbjct 4575 CTGAAACTCTCCAGACAGCACTCGTCTTGTGTAGATGTTTGAAGTGTAGGGTTCGAAAGA 4516 Query 75781 TTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACT 75840 |||||| || |||| || || || || || || || ||||| ||||| | | | | Sbjct 4515 TTCATTATTACCCATTATCTGGGCTGTCGATGCCGTTGGCATTGGTGCGATAAGCAGAGA 4456 Query 75841 ATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGA 75900 ||| | | || || | || || || || || || | ||| ||||| |||| || Sbjct 4455 ATTACGCACTCCGTGCTTGCTTATCTTCTCCTTGAGTTTCGCCCAGTCCCAGAGATTTGT 4396 Query 75901 TGGTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCATTATA 75960 ||||| || ||| | ||| || || ||||| || |||||| | ||| | ||| Sbjct 4395 GGGTACCTTATTCCACATATCATACTGGAGAATACCCTTGCTAACTGGACTTCCCTCATA 4336 Query 75961 TGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAATA 76020 || || || || || || || ||||| || || || || || || || || || || || Sbjct 4335 GGTCTCATACGTGCCATCTTTCTCAGCCAGCTCACAGCTGGCTTCCAATGCGCCATAGTA 4276 Query 76021 AATTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGATAATG 76080 ||| |||||||| |||| | ||| ||| ||| | | ||| ||| | ||||| | Sbjct 4275 AATGGTTTCGAATATCTGTTGATTCAGAAGACACGCCTTATCACTCTCATAGGGATACCG 4216 Query 76081 TAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTT 76140 | | ||| || |||||||| ||||| ||||||||||| ||||| || | |||||| Sbjct 4215 CATTAAAATCAAAGCATCTGCAAGTCCTTGAACTCCAATTCCAATTGGACGATGTCTTAA 4156 Query 76141 ATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATT 76200 ||||| | | ||| || || | |||||| ||||| ||||| || || || || | || Sbjct 4155 GTTGGATTTCTTAGCCTCGGGCAGAGGGTAGTAATTGATATCGATGATCTTGTTCAAGTT 4096 Query 76201 TCTGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAATC--AAATTTTC-CATCTAT 76257 | || ||| | || || || || || || | ||| || | | ||| | | | Sbjct 4095 TTTGGTAACAATCTTGGTGACCTCTTTGAGCTTCACAAAGTCGTACGTCTTCTCCGGTGT 4036 Query 76258 CACAAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCATTGGC 76317 || |||||||| |||||||| ||||| | ||| ||||| || | ||||| | | Sbjct 4035 TACGAACATATTGAGAGCTATCGATGCCAAATTGCAAACAGCAATCTCATCTGGTGCAGA 3976 Query 76318 ATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTT 76377 ||| | | || || ||||| | ||||| || || || || || | |||||||||||| Sbjct 3975 ATACTCAACAATTTCAGTGCACAAGTTACTGCATTTAATTGTGCCCACATTTTGTTGGTT 3916 Query 76378 GCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGA 76437 |||||| |||||| || ||||| | || | |||| || ||||| || | ||||| Sbjct 3915 GCTCTTGCGGTTACACGAATCCTTGAAGAGCATGTACGGTGTGCCAGTCTCCACTTGTGA 3856 Query 76438 TTCGATAATAGATTTCCAGACGACTCTAGCTTTTATTATA-GATTTGTATCGCTTCTCTC 76496 || || || | ||| | | | ||| || || | | |||||| ||| ||| Sbjct 3855 CTCAATGATGGCAAACCAAAGGGATTGAGCCTTGATAACACGATTTG-CTCGACCCTCCT 3797 Query 76497 TTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGAC 76556 | || |||| |||||| | | ||||| | ||| |||||||||||| | | || |||| Sbjct 3796 TCTCGTATTTTGTATAGAGCTCCTCAAACTTATCACCCCAAACATCAGCGAGTCCTGGAC 3737 Query 76557 ATTCATTCGGACACATCAATGACCACTCACCAT---CTTCCTTAACCCGTTTCATAAAGA 76613 | | | ||| ||||||| |||||| || ||| ||||| || || |||||||| | Sbjct 3736 ACTTGTGCGGGCACATCAGTGACCAATCCTCATTGGCTTCC---ACGCGCTTCATAAACA 3680 Query 76614 GATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTAT 76673 ||| |||||||| || ||| || ||||| || | | | |||| || || || || | Sbjct 3679 AATCTGGTATCCACAGGGCATAGAACAGATCCCGAGCACGATGTTCCTCTTTGCCAGTGT 3620 Query 76674 TCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCA 76733 |||| |||||||| | |||||| | | ||| |||||||| || || || || || || | Sbjct 3619 TCTTCTTAAGATCCAAGAACTCAAAGACATCGGAATGCCAAGGCTCGAGGTAAATGGCAA 3560 Query 76734 TAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTC 76793 | | || |||| ||| || |||||||| | ||| | || || ||| | |||| Sbjct 3559 AAGCTCCAGGTCTTTTGCCGCCACCCTGATCCACATAACGTGCCACATTGTTAAATACTC 3500 Query 76794 TCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATG 76853 ||| ||| |||| | ||| || ||||||||||| || ||| ||| || |||| | Sbjct 3499 TCAGCATAGGAACCAAGCCATTGGATGTACCATTGGTGCCACTAATCGAAGTTCCCTTGG 3440 Query 76854 CACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGC 76913 | ||||| | | | || || || || ||||| || ||||| | ||||| Sbjct 3439 CCCGAATGCAATGCACATTCAGACCAATACCACCTGCTGACTTTGAGATCATCGCACACT 3380 Query 76914 GTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGC 76973 | | || | | | |||| ||||| || ||| | |||| | || ||||| || Sbjct 3379 GCTCCACAGATTTAAAGATTCCCTCGATTGAGTCAGATACCATGGTGAGGAGAAAGCATG 3320 Query 76974 TAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACC 77033 ||||| ||| | | ||| | || || | ||| || || ||||| ||||| Sbjct 3319 AAGACAGCTGAGGGCGTGTGGTTGCAGCTGCGAAAAGTGTTGGTGAGGCATGTGTGAAGA 3260 Query 77034 ATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTC 77093 | ||| ||||| | |||||| || || | | | || ||||| | ||| || | Sbjct 3259 AGCGTTCCGAAAGCAAATTGTAAGTCTCCAGTGCGGAATCAATATCATCTCCATGTATAC 3200 Query 77094 CTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCA 77153 | | || || ||||||| ||| ||||| || ||||| || || ||| ||||| | Sbjct 3199 CGATGGCAACTCGCATCAGCATGTGCTGTGGACGTTCAGCAACTTTGCCATTGATTTTTA 3140 Query 77154 ACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGT 77213 |||| || ||| |||||||| || || |||||||| || || ||| || | |||| Sbjct 3139 ACAAATACGATCGCTCCAAAGTCTTGAATCCAAAATAATTATAGCCAAAATCACGATCGT 3080 Query 77214 AAATAATAACCGAATTTA 77231 | ||||| | || |||| Sbjct 3079 ATATAATGGCAGAGTTTA 3062 >seq19922 Length=1369 Score = 179 bits (198), Expect = 5e-40 Identities = 445/666 (67%), Gaps = 11/666 (2%) Strand=Plus/Minus Query 46506 CATTCCTATGAGTTTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGC 46565 ||| || | ||| ||||| |||||||| || ||||| || || || || || | ||||| Sbjct 1341 CATGCCGACGAGATTGACTGGTAGAGCGTCTGTAAGGAATTCCTGCTCTATCTTCACAGC 1282 Query 46566 ATCCGATATTATC--GATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAAC 46623 |||||| || ||| |||| | | | | ||| || | || | ||| || | ||| Sbjct 1281 ATCCGAGATGATCTCGATGATGCGCTCACG--ACTGGGACGCTGTACCAAGTGCTGGAAC 1224 Query 46624 ATTAA-ACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAA 46682 || | ||| |||||||| |||||||| || || || | || | || || || || Sbjct 1223 ATAAGCACA-GCAAAATCGCAATGAAGTCCCTCGTCGCGGGAGATCAGCTCATTCGAGAA 1165 Query 46683 TGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGA 46742 || || || ||||| || |||||||| || ||||| || || | ||| ||| || Sbjct 1164 GGTAAGACCGGGCATAAGACCACGCTTCTTCAGCCAGAAGATCGACGCAAAACTGCCGCT 1105 Query 46743 AAAGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATT 46802 ||||| |||||||| ||||| || || || | | | ||| || | | || | || Sbjct 1104 GAAGAAGATGCCTTCGACAGCAGCAAAGGCAATGATGCGCTCGCCAAAGTTTGCCGCCTT 1045 Query 46803 --ATGA-ATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTAT 46859 | || ||||| |||||||||| ||||| ||| ||| ||||| ||||| || Sbjct 1044 CGAGGAGATCCAAGACAGAGCCCAATCTGCCTTACGCTTCACAGCGGGCATCGTTTCAAT 985 Query 46860 AGCATTAAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACT 46919 ||||| ||||| ||| | || ||| || || || || || | | || Sbjct 984 GGCATTGAAGAGGTAGTCGCGCTGATGCGGATCCCGAATGTAAGTGTCGATGAGCACGCT 925 Query 46920 ATACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTC 46979 |||||||| || || | || || || || ||||| || || ||||| || | ||| || Sbjct 924 GTACATTTCCGAGTGGACATTCTCCATGGCAATCTGGAAGCCATAAAAGCAACGTGCCTC 865 Query 46980 AGTAATCTGTACCTCTGTACAAAATCGTTCAGACAA-ATTCTCATTCACTATTCCATCAC 47038 || || || || || | || || || ||||| ||||||||| || || || ||| Sbjct 864 TGTGATTTGCACTTCCTGGCTGAAGCGCTC-GACAAGATTCTCATTAACAATGCCGTCAG 806 Query 47039 TAGCAGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTTTAT 47098 || ||||| || ||||| |||||| ||| || | |||| | || ||| | Sbjct 805 AGGCGGCAAAGAAAGCCAAAACATGTGAAATGAAGTGACGCTCATTGTCTGTTAGTCGAG 746 Query 47099 TCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTG 47158 |||||| | || || || |||| ||| ||||| || | ||||||||||| || || | Sbjct 745 CCCAGTCGGTCATGTCCTTGGATAGATCCACTTCCTCCACGGTCCAGAATGAAGCTTCGG 686 Query 47159 Cttttt 47164 | |||| Sbjct 685 CCTTTT 680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712506042277440