Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_031043.1
Length=229501
Score E
Sequences producing significant alignments: (Bits) Value
seq44159 161 1e-34
>seq44159
Length=807
Score = 161 bits (178), Expect = 1e-34
Identities = 379/576 (66%), Gaps = 40/576 (7%)
Strand=Plus/Minus
Query 88153 CAACTGATATTCGCCACCGGTGAAGCAGGGTGCGGTAAAACATTCCTTTGCGCCGCCTAC 88212
|| ||||| ||||||||||| ||||| || | || ||||||||| | |||||||| |
Sbjct 791 CAGCTGATCTTCGCCACCGGCGAAGCCGGCGGTGGCAAAACATTCATCAGCGCCGCCAAG 732
Query 88213 GCTGCCGAACGTCTACTGGCAAAAGACTTTGACCGTATCATTGTCACCCGTCCAGTCCTC 88272
|| || || || | ||||| | || || || || || |||||||| || |
Sbjct 731 GCGGCGGAGGCGCTGATCCATAAAGAGGTGGATCGGATTATCGTTACCCGTCCTGTTTTG 672
Query 88273 TCTGCAGATGAAGACCTTGGCTTCTTGCCCGGCGACGTCTCAGAGAAGTTCGCCCCTTAC 88332
|| ||||||||||| || |||||||| || || |||| |||||||||||||||||
Sbjct 671 CAGGCGGATGAAGACCTCGGTTTCTTGCCGGGGGATATCTCCGAGAAGTTCGCCCCTTAT 612
Query 88333 TTCCGTCCTGTCTACGACGTGCTAAGCAAACGCTTAGGTGGTCAATTCTTACGCTACTGT 88392
||||| || || || ||| | || || ||||| | || || | |||||
Sbjct 611 TTCCGCCCGGTGTATGACATTCTGGTACGTCGTTTAGGATCTTCCTTTTTGCAGTACTGC 552
Query 88393 TTAAAGCCGGGAATTGACAAGGTAGAGATTGCTCCCTTCGC------------------- 88433
| |||| ||| | ||||||||||||||| || |||||
Sbjct 551 CTGCGCCCGGAAATCGGCAAGGTAGAGATTGCGCCGTTCGCNNNNNNNNNNNNNNNNNNN 492
Query 88434 ---------------CTACATGCGCGGACGTAGCTTTGAAAATGCAGTCATTTTATTAGA 88478
|| ||||||||||| | ||| |||||||| ||| || | | ||
Sbjct 491 NNNNNNNNNNNNNNNNTATATGCGCGGACGCACCTTCGAAAATGCGGTCGTTATCCTGGA 432
Query 88479 TGAAGCTCAGAACACTACTGCTCAG-CAGATGAAGCTCTTCCTGACACGTATCGGGGAGA 88537
|||||| |||||| || || ||| |||||||| | |||||||| || | ||||| |
Sbjct 431 TGAAGCCCAGAACGTGACCGC-CAGCCAGATGAAAATGTTCCTGACCCGCCTGGGGGAAA 373
Query 88538 AC-TGTCTCGTGATTGTCAATGGCGATATTACTCAGTGCGACTTACCGAAAGGGGTACGT 88596
|| || | || || || || ||||| | || ||||||||| | ||| || ||
Sbjct 372 ACGTGAC-GGTTATCGTTAACGGCGACGTGACCCAGTGCGACCTGCCGCGCGGCGTGAAA 314
Query 88597 TCTGGGCTGGCCGATGCGCTAACGCGTTTTGACACTGACGACTTAGTTAGCGTTATTCAC 88656
|| || || |||||| || ||| || || ||||| | | ||||||| | |
Sbjct 313 TCCGGTCTCAGCGATGCCCTGGAGCGCTTCGAAGAGGACGAGATGATCGGCGTTATCCGC 254
Query 88657 TTTGTGAAAGACGACTGTGTACGCTCCGAGCTTTGT 88692
|||| ||| | ||||| || |||||| |||||||
Sbjct 253 TTTGAAAAACAGGACTGCGTGCGCTCC--GCTTTGT 220
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 733834019924520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |