Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04] 48,067 sequences; 123,674,749 total letters Query= NC_031043.1 Length=229501 Score E Sequences producing significant alignments: (Bits) Value seq44159 161 1e-34 >seq44159 Length=807 Score = 161 bits (178), Expect = 1e-34 Identities = 379/576 (66%), Gaps = 40/576 (7%) Strand=Plus/Minus Query 88153 CAACTGATATTCGCCACCGGTGAAGCAGGGTGCGGTAAAACATTCCTTTGCGCCGCCTAC 88212 || ||||| ||||||||||| ||||| || | || ||||||||| | |||||||| | Sbjct 791 CAGCTGATCTTCGCCACCGGCGAAGCCGGCGGTGGCAAAACATTCATCAGCGCCGCCAAG 732 Query 88213 GCTGCCGAACGTCTACTGGCAAAAGACTTTGACCGTATCATTGTCACCCGTCCAGTCCTC 88272 || || || || | ||||| | || || || || || |||||||| || | Sbjct 731 GCGGCGGAGGCGCTGATCCATAAAGAGGTGGATCGGATTATCGTTACCCGTCCTGTTTTG 672 Query 88273 TCTGCAGATGAAGACCTTGGCTTCTTGCCCGGCGACGTCTCAGAGAAGTTCGCCCCTTAC 88332 || ||||||||||| || |||||||| || || |||| ||||||||||||||||| Sbjct 671 CAGGCGGATGAAGACCTCGGTTTCTTGCCGGGGGATATCTCCGAGAAGTTCGCCCCTTAT 612 Query 88333 TTCCGTCCTGTCTACGACGTGCTAAGCAAACGCTTAGGTGGTCAATTCTTACGCTACTGT 88392 ||||| || || || ||| | || || ||||| | || || | ||||| Sbjct 611 TTCCGCCCGGTGTATGACATTCTGGTACGTCGTTTAGGATCTTCCTTTTTGCAGTACTGC 552 Query 88393 TTAAAGCCGGGAATTGACAAGGTAGAGATTGCTCCCTTCGC------------------- 88433 | |||| ||| | ||||||||||||||| || ||||| Sbjct 551 CTGCGCCCGGAAATCGGCAAGGTAGAGATTGCGCCGTTCGCNNNNNNNNNNNNNNNNNNN 492 Query 88434 ---------------CTACATGCGCGGACGTAGCTTTGAAAATGCAGTCATTTTATTAGA 88478 || ||||||||||| | ||| |||||||| ||| || | | || Sbjct 491 NNNNNNNNNNNNNNNNTATATGCGCGGACGCACCTTCGAAAATGCGGTCGTTATCCTGGA 432 Query 88479 TGAAGCTCAGAACACTACTGCTCAG-CAGATGAAGCTCTTCCTGACACGTATCGGGGAGA 88537 |||||| |||||| || || ||| |||||||| | |||||||| || | ||||| | Sbjct 431 TGAAGCCCAGAACGTGACCGC-CAGCCAGATGAAAATGTTCCTGACCCGCCTGGGGGAAA 373 Query 88538 AC-TGTCTCGTGATTGTCAATGGCGATATTACTCAGTGCGACTTACCGAAAGGGGTACGT 88596 || || | || || || || ||||| | || ||||||||| | ||| || || Sbjct 372 ACGTGAC-GGTTATCGTTAACGGCGACGTGACCCAGTGCGACCTGCCGCGCGGCGTGAAA 314 Query 88597 TCTGGGCTGGCCGATGCGCTAACGCGTTTTGACACTGACGACTTAGTTAGCGTTATTCAC 88656 || || || |||||| || ||| || || ||||| | | ||||||| | | Sbjct 313 TCCGGTCTCAGCGATGCCCTGGAGCGCTTCGAAGAGGACGAGATGATCGGCGTTATCCGC 254 Query 88657 TTTGTGAAAGACGACTGTGTACGCTCCGAGCTTTGT 88692 |||| ||| | ||||| || |||||| ||||||| Sbjct 253 TTTGAAAAACAGGACTGCGTGCGCTCC--GCTTTGT 220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 733834019924520