Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04] 48,067 sequences; 123,674,749 total letters Query= NC_031057.1 Length=180219 Score E Sequences producing significant alignments: (Bits) Value seq47487 140 4e-28 >seq47487 Length=501 Score = 140 bits (154), Expect = 4e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 43639 GCGGTTAAATCCTGTTCACAAGGTGGCGTTCGTGGTGGTGCTGCAACGTTGTATTATCCG 43698 || || |||||||| || || || ||||| || || || || ||||| ||| || ||| Sbjct 1 GCCGTCAAATCCTGCTCTCAGGGCGGCGTGCGCGGCGGCGCGGCAACCCTGTTCTACCCG 60 Query 43699 ATCTGGCATTTGGAAGTTGAAAACCTGCTGGTTCTGAAAAACAACAAAGGTGTTGAGAAT 43758 || ||||| ||||||| |||| ||||||||| |||||||||||| || ||||| Sbjct 61 ATGTGGCACCTGGAAGTGGAAAGCCTGCTGGTGCTGAAAAACAACCGCGGCGTTGAAGGC 120 Query 43759 AACCGTATTCGTCACCTGGATTATGGCGTTCAGCTTAACGATTTGATGTATAAGCGTTTA 43818 ||||| | || ||| |||| || ||||| ||| | ||| | ||||||| |||| | Sbjct 121 AACCGCGTGCGCCACATGGACTACGGCGTGCAGTTGAACCGTCTGATGTACCAGCGCCTG 180 Query 43819 ATCAATAACGATTACATCACACTGTTCAGCCC 43850 ||||| ||| ||||||| ||||||||||| Sbjct 181 ATCAAAGGCGAAGACATCACCCTGTTCAGCCC 212 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 576226373440280