Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_031129.1
Length=103445
Score E
Sequences producing significant alignments: (Bits) Value
seq12148 170 1e-37
seq48009 141 6e-29
>seq12148
Length=678
Score = 170 bits (188), Expect = 1e-37
Identities = 240/337 (71%), Gaps = 0/337 (0%)
Strand=Plus/Plus
Query 97202 CGCGCCCAATCCTCGTCGTTAAGTTGCCCTGTTCGAATACGAGTCTGATCAACGCGTGCA 97261
|||||||| ||| || ||| | | || ||||| | || |||||||| ||||| |
Sbjct 1 CGCGCCCAGTCCGCGCCGTCGTGCCGGCCGGTTCGGAGGCGCGTCTGATCCACGCGCGAC 60
Query 97262 AGAGAAGCCAGTGAGCGCATCATCAGCTGGTGGCTCGGCATCTCAAGGCTAAAAACCAAT 97321
|| || ||||| |||||||| | ||| | || |||||||| ||||| || | ||
Sbjct 61 AGTGACGCCAGCATACGCATCATGATCTGCTCGCCGGGCATCTCCAGGCTGAAGATCAGC 120
Query 97322 ACGGGCTTATCGTTACGAACTGCGGCATTTTCGACGAGATTCATCGCAAACGTGGTCTTC 97381
|| || || || | | ||||| |||||| || ||||| || || ||||| |||
Sbjct 121 ACCGGTTTCTCCTGGGTCATCGCGGCGTTTTCGCACAGGTTCATGGCGAAGGTGGTTTTC 180
Query 97382 CCCATAGATGGGCGGGCGGCGACAATGATGAGATCGGACGACTGAAGCCCTGCCGTCTTC 97441
||||| ||||| ||||||||||| ||||| ||||||||| || | || || || |||
Sbjct 181 CCCATCGATGGACGGGCGGCGACGATGATCAGATCGGACTTTTGCATGCCCGCGGTTTTC 240
Query 97442 TTATTGAGATCGGTAAATCCGGTATCAAGTCCCGTTACACCATCATGCGGTCGCTGAAAC 97501
|| ||||| || | | |||||||| | || || || || |||||||| ||||| ||
Sbjct 241 TTGTTGAGGTCCTGATAGCCGGTATCGACCCCGGTCACGCCGTCATGCGGCTGCTGATAC 300
Query 97502 AACTCTTCTATGCGAGATACCGTTGCATCGAGAATGC 97538
| || ||| ||||| || || || | || || ||||
Sbjct 301 AGCTGTTCGATGCGCGAGACGGTGTCTTCCAGGATGC 337
>seq48009
Length=653
Score = 141 bits (156), Expect = 6e-29
Identities = 329/490 (67%), Gaps = 12/490 (2%)
Strand=Plus/Minus
Query 63518 GCTCGCCATCCCGGTGCCCACCTGCCATTTACTGCCTGCTTCAACGGTGGTGTTAGTGGC 63577
|||| ||| ||| |||| | || ||| ||||| || |||||| | | ||||
Sbjct 495 GCTCACCAGGCCGTTGCCGAGGCGCAGTTTGCTGCCCAGCTCGACGGTGTCGCTGGTGGA 436
Query 63578 CGGTTGCAGAGCAAAGTTAAGCCCGGACTGACCATCGGGACGATAGGACAGCTCGTTAAT 63637
||| |||||| | | ||| || |||| ||| || ||| |||||||| || ||||| ||
Sbjct 435 CGGCTGCAGACCGATGTTCAGGCCGGCCTGGCCGGTGGGGCGATAGGAGAGTTCGTTGAT 376
Query 63638 GGTCGGCGTTTCAAATCCCCTCCCGGCAGAGAGGTAAACGTTCCACTGCGGCGTCATGGC 63697
|||||| |||||||| || | ||||| ||||| |||||||||||| ||| | ||
Sbjct 375 GGTCGGGGTTTCAAAGCCGCGGCCGGCTGAGAGATAAACGTTCCACGCCGGATTGATTTT 316
Query 63698 ATACTTCAGCGCTGCCGCCGGAAGCCACTTGTGATAGC--TCGCTTCGCCGCTATCATCA 63755
||| | |||| || ||| ||||||| ||| |||| | ||| |||||| || ||
Sbjct 315 ATAGTAGAGCGAGCCCATCGGCAGCCACTGGTGGTAGCGTTTGCT--GCCGCTGTCGTCG 258
Query 63756 CCATTTTTACCTACAACATAACGATCGTTGGAATCAAACCATACCGAGCTATAGCGCGCC 63815
|| || | || ||| | || || || | |||| ||| ||||||
Sbjct 257 CCGTTGCGCGGCGTGAGGTAGTAGTCGGTCGAGTCGAAGCTAACCGTGCTGTAGCGCAGG 198
Query 63816 CCGGCGTCCAGC-CCCAGGGCTGAGGTGAGCTGCCAGTGCGTTTGAATGTAGGGATCGAG 63874
|||||||||||| |||| || | || || |||||| ||||| | ||| ||||| ||
Sbjct 197 CCGGCGTCCAGCGTCCAGTGC-GGCGTCAGTTGCCAGGAGGTTTGCAGGTAAGGATCCAG 139
Query 63875 GTTCCACATCAGGTTACGTTCGTTACGTCGCATATCACCTTTGGTGCCGAGATCGTAAAC 63934
|||||| || |||| ||||| || ||| || ||||| |||| | || ||
Sbjct 138 GTTCCAGATGCGGTTTTTCTCGTTGCGCCGCTGGTCGCCTTTCTCGCCG---TAGTCCAC 82
Query 63935 ---GCCGTTCTGATAAACAAAGTTCTCATAGCCTTTGCGCTGTTCGGTCATCGCCTCGTA 63991
||||| | || |||||| ||| | || | || | |||||||| | || ||
Sbjct 81 TGTGCCGTCTCGCAGAATAAAGTTTTCAAACCCCTGCCGGCGGTCGGTCATGGTTTCATA 22
Query 63992 ATCAAGGCCG 64001
||| || |||
Sbjct 21 ATCCAGACCG 12
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 330705353768122
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |