Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq42801 156 3e-33
seq7704 127 1e-24
seq2274 122 6e-23
seq355 91.5 1e-13
>seq42801
Length=1186
Score = 156 bits (172), Expect = 3e-33
Identities = 506/776 (65%), Gaps = 35/776 (5%)
Strand=Plus/Minus
Query 5752 TTCATGGAGTTTAACAAGTCGCCGTTGTCCGCGTCGATTTCCCATCCAAATAGACCCCCC 5811
|||||| ||| | | |||||||||||||||||||| ||||| ||||| || |||
Sbjct 777 TTCATGCTGTTGAGAATATCGCCGTTGTCCGCGTCGATCTCCCAGGAGAATAGGCCGCCC 718
Query 5812 AGCCCCTTTTGGATGACATATTTTCCCTTGGCCGTCACGGACCTCTCGTCGTCGTAGGTG 5871
||| ||| | | || || || || |||||| | | || | | ||||| |||||
Sbjct 717 AGCTGCTTATCCAACACGTACTTGCCTTTGGCCTGCCCCGAGCGGGCATCGTCAAAGGTG 658
Query 5872 ACGAGATCGTCGTTGT--GGT----ACACGTAGGGCGCTTGCGCCACTCCGTCGTA---- 5921
| |||||| || || ||| ||||||| ||||||| |||| |||||||
Sbjct 657 ATCAGATCGCCGGTGGTAGGTTTGAACACGTAAGGCGCTTCCGCCGTGGCGTCGTAGGTG 598
Query 5922 -------ATTCG--GGTTGGGATACCGGTTCGTGATGTCTTTGTAGTCCACGACACCGTT 5972
| ||| | | || || || | | ||| | ||||||||||| |||||
Sbjct 597 TACTGCCACTCGCCGCTCATGA-ACTGGCTGGCGATCTGGCGGTAGTCCACGATGCCGTT 539
Query 5973 TTCCCAGGAACCCTTTACGGGACCCGTGGCAGTGCCTGTGAAGGGATTGTTGTTGGTGAT 6032
||||||| || || || || || ||||| ||||| ||||| ||| ||||||| |
Sbjct 538 CTCCCAGGTGCCTTTGACCGGCCCGGTGGCGGTGCCGGTGAACGGAATGTTGTTCTGGTA 479
Query 6033 GTTGTGGATTCCACGCCATCCCCTGCCGTACATGGCCACGCCCACCACCAATTTGTTTGG 6092
| || | || ||| || | ||| |||||||| ||| || || | ||| ||
Sbjct 478 GCCGTTCACCCCGGTCCAACCGCGGCCATACATGGCGGTGCCGACGACGATCTTGCCCGG 419
Query 6093 GTTCACGCTCTGATTGAGCAG-GCGTTGGACGGCGAACGCGGTGGTGTACTTTTCGGTG- 6150
|| |||| ||| ||||| || || ||| || | | |||||||| |||||
Sbjct 418 CTTGACGCCCTGCGCCAGCAGCGCATT-CACGCCGTTCACCGTGGTGTA---GGCGGTGT 363
Query 6151 --GGGTTCCATGTGGGCGCGTACAGGGGCGTCTGCAGTCCCAGATCGGTGTTAGACC--A 6206
|| |||| | ||||| | ||| | ||||| | ||||| | | | ||| | |
Sbjct 362 CCGGTTTCCCGGCCGGCGCATTCAGCGCGGTCTGATGCCCCAGGT--TTTTCAGATCGAA 305
Query 6207 GGCTCCCTTGAAATCGTACGTCATGACGAAAATATGATCCAGATACTCCTGCACCGCACC 6266
||| || | ||| ||||| |||| | ||| || ||| ||| | |||| | |
Sbjct 304 GGCGCCGTAGAAGTCGTAGCTCATCAGGAAGATGTGAACCATCGAGATCTGCGCGACGTT 245
Query 6267 GTATTCTACAACGTTTATTTTGTCGTAGCCCCCGCTGATGGCGCTTGTGAGCAGATACTT 6326
|||| | || || || ||||| | ||| ||||||||||| || ||| ||||||
Sbjct 244 GTATGCCACCTTGTCGATCTTGTCCTTGCCGGCGCTGATGGCGGAGGTCAGCTCATACTT 185
Query 6327 GCGACCCGTGCGAGTCTCCAGACCGTCCAGCATGGACCTGAGGTCGCCCAAGAGCGCTTG 6386
||| || || | | ||| |||||||| | || || || || |||
Sbjct 184 GCGGCCGGTTTCCGCCGACAGCTGATCCAGCATCGCCCGCAGTTCTTTCATCAGCAGCAC 125
Query 6387 ATAGGTGACGCCGTCGACTGTGACGTTTCCTAAGGCAGGATTGGCTCCCTTGCCTCCGGG 6446
||| || | ||||| ||| | | | || | || ||||| || ||||| || ||
Sbjct 124 ATAAGTTTCCCCGTC--CTGAG-GGCTGCCCAGATTCGGGTTGGCGCCTTTGCCGCCCGG 68
Query 6447 AAATTCCCAATCTATGTCCACGCCGTCGAAGAACTTCCAAGTTTCCAGAAATTCTT 6502
|||||||| || || ||||||||||||||||||||||| || | ||| || ||||
Sbjct 67 GAATTCCCAGTCGATATCCACGCCGTCGAAGAACTTCCAGGTCTGCAGGAACTCTT 12
>seq7704
Length=29863
Score = 127 bits (140), Expect = 1e-24
Identities = 154/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||||| ||| | || ||| || || ||||||||||||| ||| ||| | || ||
Sbjct 18559 CACCAAGTGCAATGTTGACTCTTTCTGAATGTTGTAATCGGAGAGAGTGCGGCCATCTTC 18500
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
|| ||||| || ||||||||||||||||||||||||| ||| | ||||| || |||
Sbjct 18499 CAATTGCTTGCCAGCAAAGATCAAACGCTGCTGATCTGGAGGAATTCCTTCTTTGTCCTG 18440
Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||||| || | || | ||||| || | | ||| ||||| | || || |||||
Sbjct 18439 AATCTTGGCTTTGACATTTTCGATGGTATCCGACGGTTCGACCTCAAGAGTGATGGTCTT 18380
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||||||||| || |||||||| |||||
Sbjct 18379 ACCCGTGAGGGTTTTAACGAAGATCTGCAT 18350
>seq2274
Length=37031
Score = 122 bits (134), Expect = 6e-23
Identities = 153/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||||| ||| || || |||||| ||||||||||| || | || ||| | || ||
Sbjct 30368 CACCAAGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGACCATCCTC 30309
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
||||||||| || || ||||||| |||||||||||||| ||| | ||| ||||| |||
Sbjct 30308 CAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGAATACCCTCCTTGTCCTG 30249
Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||||| ||| | | | ||||| || | | |||||||||| || || |||||
Sbjct 30248 GATCTTGGCCTTGACATTCTCAATGGTATCAGATGGCTCCACCTCCAAGGTGATGGTCTT 30189
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || | |||||| ||||| || |||||
Sbjct 30188 GCCAGTCAAGGTCTTGACGAAAATCTGCAT 30159
>seq355
Length=9390
Score = 91.5 bits (100), Expect = 1e-13
Identities = 133/188 (71%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 44150 TTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATC 44209
|| ||||||||||| || | || || | || ||||||||||| ||||| || ||
Sbjct 9390 TTCTGGATGTTGTAGTCCGACAGAGTACGGCCATCCTCCAGCTGCTTTCCGGCGAAAATG 9331
Query 44210 AAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCT 44269
| |||||||||||||| || | ||| ||||| || || || ||||| | |
Sbjct 9330 AGACGCTGCTGATCTGGGGGGATACCCTCCTTGTCTTGGATTTTAGCCTTCACATTCTCA 9271
Query 44270 ATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAG 44329
|||||||||| | ||| || |||| || || ||||| || || | || ||||| |||
Sbjct 9270 ATGGTGTCGGAAGGTTCAACTTCCAAAGTGATGGTCTTGCCAGTCAATGTTTTCACAAAG 9211
Query 44330 ATTTGCAT 44337
|| |||||
Sbjct 9210 ATCTGCAT 9203
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359779511661339
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |