Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04] 48,067 sequences; 123,674,749 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq7704 154 4e-32 seq355 100 7e-16 >seq7704 Length=29863 Score = 154 bits (170), Expect = 4e-32 Identities = 158/205 (77%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| ||||| ||||| || || || ||||| || ||||| ||| || || Sbjct 18353 CAGATCTTCGTTAAAACCCTCACGGGTAAGACCATCACTCTTGAGGTCGAACCGTCGGAT 18412 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || |||||| ||||||||||||||||||||||| ||||| || ||||| Sbjct 18413 ACCATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAAGGAATTCCTCCAGATCAGCAG 18472 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| || || || || | |||||||| | ||||| ||||||| ||| | Sbjct 18473 CGTTTGATCTTTGCTGGCAAGCAATTGGAAGATGGCCGCACTCTCTCCGATTACAACATT 18532 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || ||||| |||||| |||| |||| Sbjct 18533 CAGAAAGAGTCAACATTGCA-CTTG 18556 >seq355 Length=9390 Score = 100 bits (110), Expect = 7e-16 Identities = 139/194 (72%), Gaps = 3/194 (2%) Strand=Plus/Plus Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974 ||||||| | || || |||||||| | || || || || ||||| | || || ||| Sbjct 9200 AAAATGC---AGATCTTTGTGAAAACATTGACTGGCAAGACCATCACTTTGGAAGTTGAA 9256 Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034 || |||||||| ||||| || || || || || ||||| || || ||||| || Sbjct 9257 CCTTCCGACACCATTGAGAATGTGAAGGCTAAAATCCAAGACAAGGAGGGTATCCCCCCA 9316 Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094 || ||||| || || || ||||||||||| ||||| || ||||| | ||||| | || Sbjct 9317 GATCAGCAGCGTCTCATTTTCGCCGGAAAGCAGCTGGAGGATGGCCGTACTCTGTCGGAC 9376 Query 178095 TATAACGTCCAAAA 178108 || ||| |||| || Sbjct 9377 TACAACATCCAGAA 9390 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1202989871983998