Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq2274 118 1e-21
seq7704 84.2 2e-11
>seq2274
Length=37031
Score = 118 bits (130), Expect = 1e-21
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | ||||| || || || ||||||||| ||||| ||||| ||
Sbjct 30385 CCACCACGCAGACGGAGCACCAAGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGAA 30326
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| ||||| | || || ||||||||||| ||||| ||||| ||||| || || | |||
Sbjct 30325 AGAGTGCGACCATCCTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGA 30266
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACC 41815
| | |||||||||| ||| || ||| | | | || || | |||||||
Sbjct 30265 ATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTATCAGATGGCTCCACC 30206
Query 41816 TCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865
|||| || || || || || |||| ||||| |||||||||||||| ||
Sbjct 30205 TCCAAGGTGATGGTCTTGCCAGTCAAGGTCTTGACGAAAATCTGCATTTT 30156
>seq7704
Length=29863
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || || || | ||||| |||| || ||| ||||||||||| || ||||||
Sbjct 18576 CCACCACGAAGGCGGAGCACCAAGTGCAATGTTGACTCTTTCTGAATGTTGTAATCGGAG 18517
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| ||||| | || || | |||||||| || || |||| ||||| || || | |||
Sbjct 18516 AGAGTGCGGCCATCTTCCAATTGCTTGCCAGCAAAGATCAAACGCTGCTGATCTGGAGGA 18457
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| | || |||||| ||| | || |||| || | | || || || || ||
Sbjct 18456 ATTCCTTCTTTGTCC-TGAATCTTGGCTTTGACATTTTCGATGGTATCCGACGGTTCGAC 18398
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||| | || || || |||||||| || || || ||||| ||||||||
Sbjct 18397 CTCAAGAGTGATGGTCTTACCCGTGAGGGTTTTAACGAAGATCTGCAT 18350
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462026230420400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |