Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zeugodacus_20cucurbitae_20[refseq_20GCF_5F000806345.1_202014-12-23] 5,572 sequences; 374,820,345 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq27 86.0 5e-12 >seq27 Length=2235907 Score = 86.0 bits (94), Expect = 5e-12 Identities = 142/203 (70%), Gaps = 9/203 (4%) Strand=Plus/Plus Query 29095 CCAGCGGGCGTGTTGCTGCCACGGCGCGTCGTCGGGTTCCCAATCCTTCAGACCGCCGTC 29154 |||| | || || || | ||| ||| |||| || ||||||||||| || || | | | Sbjct 797275 CCAGAGCGCATGCTGTTCCCATGGCTCGTCATCATCATCCCAATCCTTAAGGCCACAGCC 797334 Query 29155 GCAGCAAAAGCAC----CGCGTCTTGTCGCCCTGGCCAGTGTAAAAGAATCCGGCCTCGG 29210 ||||| ||||||| |||| || || ||| || || ||||| ||||| |||| Sbjct 797335 GCAGCTAAAGCACTTGACGCG----ATCACCGGTGCCGGTATAGAAGAAGCCGGCATCGG 797390 Query 29211 CCAACTCTTCGGGCCGCTGTTTCAACCCGCGGGGCCACTCCGCAAAGGTGCGCAAACGCG 29270 | || || | ||| || || |||| ||| ||||| || ||||| | || || || | Sbjct 797391 CTAATTCCTTGGGACGTTGCTTCATGTTGCGTGGCCATTCGGCAAACGAACGTAAGCGTG 797450 Query 29271 CGGCTTCCGTGGCATACTGCGGG 29293 | ||||| ||||||||| |||| Sbjct 797451 CCGCTTCGATGGCATACT-CGGG 797472 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422230524905552