Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zeugodacus_20cucurbitae_20[refseq_20GCF_5F000806345.1_202014-12-23] 5,572 sequences; 374,820,345 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq154 93.3 8e-14 >seq154 Length=581927 Score = 93.3 bits (102), Expect = 8e-14 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 189436 AACTCATGATCCTCTATGGAACGCGTCACAAATGCAGATGGTGAGAGAAGGAAAAATGCA 189495 ||| |||||| ||| |||||||| | || || ||| || || ||||||| |||||||| Sbjct 260063 AACACATGATGATCTGTGGAACGCAGCGCAGATACAGTTGTTGCGAGAAGGTAAAATGCA 260004 Query 189496 TAGTTTTTTACGAATGTATTGGGCTAAGAAGATACTTGAATGGACTAGAACACCTGAAG 189554 | ||||| | || ||||||||||| || ||||| | |||||| | |||||||||| Sbjct 260003 TGGTTTTCTGCGTATGTATTGGGCAAAAAAGATTTTGGAATGGTCGGCTACACCTGAAG 259945 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 923132499342880