Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zeugodacus_20cucurbitae_20[refseq_20GCF_5F000806345.1_202014-12-23] 5,572 sequences; 374,820,345 total letters Query= NC_002667.1 Length=41834 Score E Sequences producing significant alignments: (Bits) Value seq884 145 2e-30 seq641 145 2e-30 >seq884 Length=19560 Score = 145 bits (160), Expect = 2e-30 Identities = 182/249 (73%), Gaps = 3/249 (1%) Strand=Plus/Plus Query 7105 GCAGTTGCCACTTTTACTCTTGCAGTTAATCGAGCATTTAAAAATGCTAATGGAGAAAGA 7164 ||||||| | ||||||||||| || || || |||| ||| || || ||| || Sbjct 871 GCAGTTGGAAGCTTTACTCTTGCTGTGAACCGTAACTTTACAAACCAAAACGGCGAACGA 930 Query 7165 GAAGCTGACTTTATCAATTGTGTTATTTGGGGTAAATCAGCCGAAAACTTGGCCAATTGG 7224 ||||| || |||||||| ||||| |||||| |||| | || |||| |||| |||| Sbjct 931 GAAGCGGATTTTATCAACTGTGTAATTTGGCGTAAGCCTGCTGAAACAATGGCTAATTAT 990 Query 7225 ACTCATAAAGGTCAATTAATCGGAGTTACTGGTAGTATTCAAACTCGAAACTACGAGAAC 7284 |||| |||||| |||| | |||||| ||| || ||||||||||| || || || ||| Sbjct 991 ACTCGTAAAGGAACATTATTAGGAGTTGTTGGCAGAATTCAAACTCGTAATTATGACAAC 1050 Query 7285 CAACAAGGTCAACGAGTTTATGTAACAGAAGTCATTGCAAACAATTTCCAAGTACTTGA- 7343 |||||||| ||||| || ||||| || ||||| || | | ||||||| || | || Sbjct 1051 CAACAAGGCCAACGTGTCTATGTGACTGAAGTTGTTTGCGAGAGTTTCCAATTATTAGAG 1110 Query 7344 --AAAAAGC 7350 ||||||| Sbjct 1111 CCAAAAAGC 1119 >seq641 Length=27874 Score = 145 bits (160), Expect = 2e-30 Identities = 182/249 (73%), Gaps = 3/249 (1%) Strand=Plus/Minus Query 7105 GCAGTTGCCACTTTTACTCTTGCAGTTAATCGAGCATTTAAAAATGCTAATGGAGAAAGA 7164 ||||||| | ||||||||||| || || || |||| ||| || || ||| || Sbjct 27004 GCAGTTGGAAGCTTTACTCTTGCTGTGAACCGTAACTTTACAAACCAAAACGGCGAACGA 26945 Query 7165 GAAGCTGACTTTATCAATTGTGTTATTTGGGGTAAATCAGCCGAAAACTTGGCCAATTGG 7224 ||||| || |||||||| ||||| |||||| |||| | || |||| |||| |||| Sbjct 26944 GAAGCGGATTTTATCAACTGTGTAATTTGGCGTAAGCCTGCTGAAACAATGGCTAATTAT 26885 Query 7225 ACTCATAAAGGTCAATTAATCGGAGTTACTGGTAGTATTCAAACTCGAAACTACGAGAAC 7284 |||| |||||| |||| | |||||| ||| || ||||||||||| || || || ||| Sbjct 26884 ACTCGTAAAGGAACATTATTAGGAGTTGTTGGCAGAATTCAAACTCGTAATTATGACAAC 26825 Query 7285 CAACAAGGTCAACGAGTTTATGTAACAGAAGTCATTGCAAACAATTTCCAAGTACTTGA- 7343 |||||||| ||||| || ||||| || ||||| || | | ||||||| || | || Sbjct 26824 CAACAAGGCCAACGTGTCTATGTGACTGAAGTTGTTTGCGAGAGTTTCCAATTATTAGAG 26765 Query 7344 --AAAAAGC 7350 ||||||| Sbjct 26764 CCAAAAAGC 26756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133738350282144