Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zeugodacus_20cucurbitae_20[refseq_20GCF_5F000806345.1_202014-12-23] 5,572 sequences; 374,820,345 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq45 179 4e-40 >seq45 Length=1794600 Score = 179 bits (198), Expect = 4e-40 Identities = 310/444 (70%), Gaps = 10/444 (2%) Strand=Plus/Minus Query 6802 CGAGTTAATTGTTCTTTTATAGCTTTTATATGATCTAAATAAATATGAGCATCTCCTAGC 6861 || |||| |||||| ||| || | ||||||| ||||| || ||||| |||| Sbjct 1449893 CGCGTTAGCTGTTCTGTTAGCGCCTCGATATGATTGTTATAAACGTGTGCATCGCCTAAA 1449834 Query 6862 GTATGAATAAATTCACCTGGTTTCATATCAACAGCTTGAGCAATTAAATATGTTAATAAT 6921 || || | || || |||||| | |||| | |||||||| | ||| || | || Sbjct 1449833 GTGTGGACGAAGTCCCCTGGTCGGAGATCAGTAATGTGAGCAATCATATAGGTAAGCAAC 1449774 Query 6922 GCATAAGAAGCTACATTAAAAGGTACACCTAATCCCATATCTGCTGATCTTTGATAACAT 6981 || || || || | ||| || ||||||||||||||||| || || | ||| || || Sbjct 1449773 GCGTATGATGCAATATTGAATGGTACACCTAATCCCATGTCAGCACTACGTTGGTATAAT 1449714 Query 6982 TGACAAGATAAAAT---ATTGTCTATAGCATAAAATTGACACAATACA-TGACATGGAGG 7037 |||||||| || |||| | | || ||||||| ||| ||| ||||| || || Sbjct 1449713 TGACAAGACAACTCTCCATTGGCAA---CAAAAAATTGTG-CAAGACAATGACAAGGGGG 1449658 Query 7038 TAAAACAGCCTGATCTATATCAGATGGATTCCAAGCAGTCATTAAAATACGTCTATCATT 7097 | | | ||| |||||| |||||||| |||| ||||| |||||||| |||||| Sbjct 1449657 CAGAGCCATTTGAGGTATATCGACAGGATTCCACGCAGACATTATAATACGTCGATCATT 1449598 Query 7098 TGGATTTGTTTTTAATTTTGTTA-TAATTATTTGTAATTGATCTATACCCTGACCTTCAT 7156 |||||| |||| | ||| ||||| | | | || | |||||| | |||| ||||| | Sbjct 1449597 TGGATT-GTTTCTGATTGTGTTAATCACTTCCTGAAGTTGATCCACTCCCTCACCTTTGT 1449539 Query 7157 AATTAGTATGACAATTTATATAATTAGCTCCAAAATGTCTCCATTGAAACCCATAAATAG 7216 || | | ||||| | || || || |||||||| | ||||||||| || |||| | Sbjct 1449538 AACTGTCTTTGCAATTCCTGTACTTGGCCCCAAAATGACGCCATTGAAAACCGTAAACTG 1449479 Query 7217 GACCTAAATCACCTTCTTCACGAT 7240 |||||| |||||||||||| |||| Sbjct 1449478 GACCTAGATCACCTTCTTCGCGAT 1449455 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595830497515200