Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zeugodacus_20cucurbitae_20[refseq_20GCF_5F000806345.1_202014-12-23] 5,572 sequences; 374,820,345 total letters Query= NC_006641.1 Length=15959 Score E Sequences producing significant alignments: (Bits) Value seq255 435 3e-118 seq186 392 3e-105 seq146 385 5e-103 seq111 378 7e-101 seq17 333 3e-87 seq5 320 2e-83 seq24 309 3e-80 seq157 259 5e-65 seq156 163 3e-36 seq55 131 2e-26 seq708 118 1e-22 seq3186 102 8e-18 >seq255 Length=246012 Score = 435 bits (482), Expect = 3e-118 Identities = 444/574 (77%), Gaps = 10/574 (2%) Strand=Plus/Plus Query 367 CTACCCACTAAACCCTAAACCCCTTTCTCTTCTATCCTCTGATCCCCCATGGTA-CCGCC 425 ||||| |||||| ||| || ||||| ||| | |||||||||||| |||| ||||| Sbjct 45519 CTACCGACTAAAACCT---CCGCTTTCC--TCTGAC-TCTGATCCCCCACGGTATCCGCC 45572 Query 426 GTAAGGCATTTCTTCGCGGGGGGAGGAATTAGCTGCCGCTCTTCCTTCTGGTGGCTAAGA 485 || ||||||| ||||| |||| ||||| || ||| | ||||||||||||| | ||||||| Sbjct 45573 GTTAGGCATTACTTCGTGGGGAGAGGATTTGGCTACTGCTCTTCCTTCTGATAGCTAAGA 45632 Query 486 TGTTATTTCTTCCTTC---TAGTTTCTGTCATTCGCTCTTTTCTTCTCAATGGATTGCAA 542 |||||||||||| ||| ||||| ||||||| || ||||| | || ||||| |||| Sbjct 45633 TGTTATTTCTTCTTTCATCTAGTTGTTGTCATTTGCCCTTTTTCTTTCGATGGAACGCAA 45692 Query 543 CTCGGTAAGCACTTTTGTAGCAAAAGTGCTTGTGGCGTTCCAGGCAGCTTCTGATGACAG 602 || | || |||| ||| ||||| ||| | | |||| ||| | ||| |||||||| Sbjct 45693 GTCTATGAGGACTTCTGTTGCAAATGTGTTGATAGCGTACCAAGAGGCTCTTGATGACAA 45752 Query 603 CATTGCTGCTACTATTATCTCTGGTTGGATTTTCCTCTTCAGGATATTCTCCAGCTCATC 662 |||| | ||| | | ||||||||||||| || | | | ||||||| || ||| Sbjct 45753 CATTATTTCTATAACTGTCTCTGGTTGGATACTCTGGTGTAAGCTATTCTCGAGTAGATC 45812 Query 663 CCGATGTGGGTAAAAACGTGAGCACTCAAAGAAAACGTGCTCTGCATCTTCATTGACTCC 722 || |||| | ||| |||| ||||||||||||||| ||| | ||||||||| | ||| | Sbjct 45813 ACGCAGTGGATTAAATCGTGGGCACTCAAAGAAAACATGCGCCGCATCTTCAATAACTTC 45872 Query 723 TGGGCAGGATGGGCACTCTGGGGAATTATCATGCTTGGAGCGGTGGAGATACGCCCGGAA 782 ||||||||| |||||||| ||||||||||| ||||| | |||| || || ||||||| Sbjct 45873 TGGGCAGGACGGGCACTCCGGGGAATTATCGTGCTTAAAACGGTAAAGGTAACCCCGGAA 45932 Query 783 ACAGCCGTGTCCTGATAACATCTGTGTAAGATAATAGTTGACCTCACCGTGACTCCGGTT 842 ||| || ||||||||||||||||| || ||||||||||| ||||| |||||||| ||||| Sbjct 45933 ACAACCATGTCCTGATAACATCTGCGTGAGATAATAGTTTACCTCTCCGTGACTACGGTT 45992 Query 843 TAGCCAAACGTTGATCCTTGGTATGAGACGATGCGTCCATCTACCATTCACTGTGGCATC 902 ||||| || | |||| ||||||||||||||| ||||| ||||| ||| ||| | ||| Sbjct 45993 CAGCCACACATAAATCCGTGGTATGAGACGATGGGTCCACCTACCCTTCTCTGCAGTATC 46052 Query 903 CCACTGTAGTTGCCATCGACTTATGCTCCTCCGT 936 ||| || || ||||| || |||||| ||||| Sbjct 46053 CCATTGAAGCTGCCAACGTGCGATGCTCTTCCGT 46086 >seq186 Length=557258 Score = 392 bits (434), Expect = 3e-105 Identities = 412/538 (77%), Gaps = 8/538 (1%) Strand=Plus/Plus Query 403 CTCTGATCCCCCATGGTA-CCGCCGTAAGGCATTTCTTCGCGGGGGGAGGAATTAGCTGC 461 || |||||||||| |||| ||||||| |||||| ||||| ||||| | ||| || | Sbjct 1364 CTTTGATCCCCCACGGTATCCGCCGTTGGGCATTACTTCGTGGGGGTA--AATC--CTAC 1419 Query 462 CGCTCTTCCTTCTGGTGGCTAAGATGTTATTTCTTCCTTC---TAGTTTCTGTCATTCGC 518 ||||||||||||| | |||| ||||||||| |||| ||| ||||| ||||||| | Sbjct 1420 TGCTCTTCCTTCTGATAGCTACGATGTTATTACTTCTTTCATCTAGTTGATGTCATTTTC 1479 Query 519 TCTTTTCTTCTCAATGGATTGCAACTCGGTAAGCACTTTTGTAGCAAAAGTGCTTGTGGC 578 |||||| | || ||||| |||| || | || |||| ||| ||||| ||||| | || Sbjct 1480 TCTTTTTCTTTCGATGGAACGCAAGTCTATGAGGACTTCTGTTGCAAATGTGCTGATAGC 1539 Query 579 GTTCCAGGCAGCTTCTGATGACAGCATTGCTGCTACTATTATCTCTGGTTGGATTTTCCT 638 || ||| | ||| |||||||| ||| | ||| | | ||||| ||||||| || Sbjct 1540 GTACCAAGAGGCTCTTGATGACAATATTATTTCTATAACTGTCTCTAGTTGGATACTCTG 1599 Query 639 CTTCAGGATATTCTCCAGCTCATCCCGATGTGGGTAAAAACGTGAGCACTCAAAGAAAAC 698 | | | ||||||| || ||| || ||||| | ||| |||| ||||||||||||||| Sbjct 1600 ATGTAAGCTATTCTCGAGTGGATCACGCTGTGGATTAAATCGTGGGCACTCAAAGAAAAC 1659 Query 699 GTGCTCTGCATCTTCATTGACTCCTGGGCAGGATGGGCACTCTGGGGAATTATCATGCTT 758 | ||| ||||| ||| | | | |||||||||| |||||||| ||||||||||| ||||| Sbjct 1660 ATCCTCCGCATCCTCAATTATTTCTGGGCAGGACGGGCACTCCGGGGAATTATCGTGCTT 1719 Query 759 GGAGCGGTGGAGATACGCCCGGAAACAGCCGTGTCCTGATAACATCTGTGTAAGATAATA 818 | |||| || || ||||||||||| || ||||||||||||||||| || |||||||| Sbjct 1720 AAAACGGTAAAGGTAAGCCCGGAAACAACCATGTCCTGATAACATCTGCGTGAGATAATA 1779 Query 819 GTTGACCTCACCGTGACTCCGGTTTAGCCAAACGTTGATCCTTGGTATGAGACGATGCGT 878 |||||| || | |||||| ||||| ||||| || | |||| ||||||||||||||| || Sbjct 1780 GTTGACTTCTCAGTGACTACGGTTCAGCCACACATCAATCCGTGGTATGAGACGATGGGT 1839 Query 879 CCATCTACCATTCACTGTGGCATCCCACTGTAGTTGCCATCGACTTATGCTCCTCCGT 936 ||| ||||| ||| ||| |||||||| || || ||||| || |||||| ||||| Sbjct 1840 CCACCTACCCTTCTCTGCAGCATCCCATTGAAGATGCCAACGTGCGATGCTCTTCCGT 1897 >seq146 Length=545274 Score = 385 bits (426), Expect = 5e-103 Identities = 409/538 (76%), Gaps = 15/538 (3%) Strand=Plus/Minus Query 403 CTCTGATCCCCCATGGTA-CCGCCGTAAGGCATTTCTTCGCGGGGGGAGGAATTAGCTGC 461 |||||||||| || |||| ||||||| ||||||| |||| |||| ||||| |||||| | Sbjct 136125 CTCTGATCCCGCACGGTATCCGCCGTTAGGCATTAGTTCGTGGGGAGAGGATTTAGCTAC 136066 Query 462 CGCTCTTCCTTCTGGTGGCTAAGATGTTATTTCTTCCTTC---TAGTTTCTGTCATTCGC 518 ||||||||||||| | ||||||||||||||||||| ||| ||| | ||||||| || Sbjct 136065 TGCTCTTCCTTCTGATAGCTAAGATGTTATTTCTTCTTTCATTTAGATGTTGTCATTTGC 136006 Query 519 TCTTTTCTTCTCAATGGATTGCAACTCGGTAAGCACTTTTGTAGCAAAAGTGCTTGTGGC 578 ||||| | | ||||| |||| || | || | || ||| ||||| ||| | | || Sbjct 136005 CCTTTTTCTTTTGATGGAACGCAAGTCTATGAGGATTTCTGTTGCAAATGTGTTGATAGC 135946 Query 579 GTTCCAGGCAGCTTCTGATGACAGCATTGCTGCTACTATTATCTCTGGTTGGATTTTCCT 638 || ||| | ||| |||||||| |||| | ||| | | ||||||||||||| || Sbjct 135945 GTACCAAGAGGCTCTTGATGACAACATTATTTCTAAAACTGTCTCTGGTTGGATACTCTG 135886 Query 639 CTTCAGGATATTCTCCAGCTCATCCCGATGTGGGTAAAAACGTGAGCACTCAAAGAAAAC 698 | | | ||||||| || ||| || ||||| | ||| |||| ||||||||||||||| Sbjct 135885 GTGTAAGCTATTCTCGAGTAGATCACGCTGTGGATTAAATCGTGGGCACTCAAAGAAAAC 135826 Query 699 GTGCTCTGCATCTTCATTGACTCCTGGGCAGGATGGGCACTCTGGGGAATTATCATGCTT 758 ||||| ||||||||| | ||| ||| |||||| |||||||| ||||||| ||| ||||| Sbjct 135825 ATGCTCGGCATCTTCAATAACTTCTGAGCAGGACGGGCACTCCGGGGAATAATCGTGCTT 135766 Query 759 GGAGCGGTGGAGATACGCCCGGAAACAGCCGTGTCCTGATAACATCTGTGTAAGATAATA 818 | |||| || || ||| ||||||| || ||||||||||||||||| || |||||||| Sbjct 135765 AAAACGGTAAAGGTAAGCCTGGAAACAACCATGTCCTGATAACATCTGCGTGAGATAATA 135706 Query 819 GTTGACCTCACCGTGACTCCGGTTTAGCCAAACGTTGATCCTTGGTATGAGACGATGCGT 878 ||||||||| |||| ||| ||||| ||||| || | |||| ||||||||||||||| | Sbjct 135705 GTTGACCTCTCCGTTACTACGGTTCAGCCACACATCAATCCGTGGTATGAGACGATGGG- 135647 Query 879 CCATCTACCATTCACTGTGGCATCCCACTGTAGTTGCCATCGACTTATGCTCCTCCGT 936 ||| || || | |||||| || || ||||| || | |||||| ||||| Sbjct 135646 -----TACAATGCA-----GTATCCCATTGAAGCTGCCAACGTGTGATGCTCTTCCGT 135599 >seq111 Length=821899 Score = 378 bits (418), Expect = 7e-101 Identities = 404/531 (76%), Gaps = 11/531 (2%) Strand=Plus/Minus Query 394 TCTTCTATCCTCTGATCCCCCATGGTA-CCGCCGTAAGGCATTTCTTCGCGGGGGGAGGA 452 || ||| | ||||||||||||| |||| ||||||| ||||||| ||||| | ||| || | Sbjct 817178 TCCTCTGTACTCTGATCCCCCACGGTAACCGCCGTTAGGCATTACTTCGTGAGGGAAGAA 817119 Query 453 ATTAGCTGCCGCTCTTCCTTCTGGTGGCTAAGATGTTATT---TCTTCCTTCTAGTTTCT 509 |||||| | ||||| ||||||||| |||||||||||||| |||| | ||||||| | Sbjct 817118 TTTAGCTACTGCTCTCCCTTCTGGTAGCTAAGATGTTATTACCTCTTTCATCTAGTTGTT 817059 Query 510 GTCATTCGCTCTTTTCTTCTCAATGGATTGCAACTCGGTAAGCACTTTTGTAGCAAAAGT 569 |||| | || ||||| | || | | ||| || | || |||| ||| ||||| | Sbjct 817058 GTCAGTTGCCCTTTTTCTTTCGACG-----CAAGTCTATGAGGACTTCTGTTGCAAATAT 817004 Query 570 GCTTGTGGCGTTCCAGGCAGCTTCTGATGACAGCATTGCTGCTACTATTATCTCTGGTTG 629 ||| | ||||||| ||| |||||||| |||| | ||| | | |||||||||| Sbjct 817003 GCTGATAGCGTTCCGAAAGGCTCTTGATGACAACATTATTTCTATAACTGTCTCTGGTTG 816944 Query 630 GATTTTCCTCTTCAGGATATTCTCCAGCTCATCCCGATGTGGGTAAAAACGTGAGCACTC 689 ||| || | | |||||| || || ||| || ||||| | ||| |||| |||||| Sbjct 816943 GATACTCTGGTGTAAGATATTTTCGAGTAGATCACGCTGTGGATTAAATCGTGGGCACTC 816884 Query 690 AAAGAAAACGTGCTCTGCATCTTCATTGACTCCTGGGCAGGATGGGCACTCTGGGGAATT 749 ||||||||| ||| ||||||||| | ||| |||||| ||| ||||||| |||||||| Sbjct 816883 AAAGAAAACATGCC--GCATCTTCAATTACTTCTGGGCCGGACGGGCACTACGGGGAATT 816826 Query 750 ATCATGCTTGGAGCGGTGGAGATACGCCCGGAAACAGCCGTGTCCTGATAACATCTGTGT 809 ||| ||||| | ||||| || || ||| ||||||| || ||||||||||||| ||| || Sbjct 816825 ATCGTGCTTAAAACGGTGTAGGTAAGCCTGGAAACAACCATGTCCTGATAACAGCTGCGT 816766 Query 810 AAGATAATAGTTGACCTCACCGTGACTCCGGTTTAGCCAAACGTTGATCCTTGGTATGAG 869 ||||||||||||||||| |||||||| ||||| ||||| || | |||| ||||||||| Sbjct 816765 GAGATAATAGTTGACCTCTCCGTGACTACGGTTCAGCCACACATCAATCCGTGGTATGAG 816706 Query 870 ACGATGCGTCCATCTACCATTCACTGTGGCATCCCACTGTAGTTGCCATCG 920 | |||| ||||| ||||| ||| || | |||||| || || ||||| || Sbjct 816705 AAGATGGGTCCACCTACCCTTCTTTGCAGTATCCCATTGAAGCTGCCAACG 816655 >seq17 Length=3244506 Score = 333 bits (368), Expect = 3e-87 Identities = 332/426 (78%), Gaps = 6/426 (1%) Strand=Plus/Plus Query 398 CTATCCTCTGATCCCCCATGGTA-CCGCCGTAAGGCATTTCTTCGCGGGGGGAGGAATTA 456 |||||||||||| ||||| |||| ||||||| ||||||| ||||| ||||| |||| ||| Sbjct 1165647 CTATCCTCTGATTCCCCACGGTATCCGCCGTTAGGCATTACTTCGTGGGGGAAGGATTTA 1165706 Query 457 GCTGCCGCTCTTCCTTCTGGTGGCTAAGATGTTATTTCTTCCTTC---TAGTTTCTGTCA 513 ||| | | ||||||||||||| |||||||||||||| |||| ||| ||||| ||||| Sbjct 1165707 GCTACTGTTCTTCCTTCTGGTAGCTAAGATGTTATTACTTCTTTCATCTAGTTGTTGTCA 1165766 Query 514 TTCGC-TCTTTTCTTCTCAATGGATTGCAACTCGGTAAGCACTTTTGTAGCAAAAGTGCT 572 || || | ||||||| || ||||| |||| || | || |||| ||| ||||| ||||| Sbjct 1165767 TTTGCCTTTTTTCTT-TCGATGGAACGCAAGTCTTTGAGGACTTCTGTTGCAAATGTGCT 1165825 Query 573 TGTGGCGTTCCAGGCAGCTTCTGATGACAGCATTGCTGCTACTATTATCTCTGGTTGGAT 632 | |||||||| | ||| |||||||| |||| | ||| | | |||||||||||| Sbjct 1165826 GATAGCGTTCCAAGAGGCTCTTGATGACAACATTATTTCTATAACTGCCTCTGGTTGGAT 1165885 Query 633 TTTCCTCTTCAGGATATTCTCCAGCTCATCCCGATGTGGGTAAAAACGTGAGCACTCAAA 692 || | | ||||||||| || ||| ||||| | ||| |||| |||||||| Sbjct 1165886 ACTCTGGTGTATGATATTCTCGAGTAGATCAACGTGTGGATTAAATCGTGGGCACTCAAT 1165945 Query 693 GAAAACGTGCTCTGCATCTTCATTGACTCCTGGGCAGGATGGGCACTCTGGGGAATTATC 752 ||||| ||||| ||||||||| | ||| |||||||||||| |||||| |||||||||| Sbjct 1165946 GAAAATATGCTCCGCATCTTCAATTACTTCTGGGCAGGATGAGCACTCCGGGGAATTATT 1166005 Query 753 ATGCTTGGAGCGGTGGAGATACGCCCGGAAACAGCCGTGTCCTGATAACATCTGTGTAAG 812 ||||| | ||||| || || ||||||||||| | ||| ||||||||||||| || || Sbjct 1166006 GTGCTTAAAACGGTGTAGGTAAGCCCGGAAACAACAATGTTCTGATAACATCTGCGTGAG 1166065 Query 813 ATAATA 818 |||||| Sbjct 1166066 ATAATA 1166071 >seq5 Length=5596510 Score = 320 bits (354), Expect = 2e-83 Identities = 404/558 (72%), Gaps = 44/558 (8%) Strand=Plus/Minus Query 367 CTACCCACTAAACCCTAAACCCCTTTCTCTTCTATCCTCTGATCCCCCATGGTA-CCGCC 425 ||||| |||||| ||| || | || ||| | |||| ||| |||| |||| ||||| Sbjct 2097703 CTACCGACTAAAACCT-----CCGCTATCCTCTGTACTCTTATCTCCCACGGTATCCGCC 2097649 Query 426 GTAAGGCAT---TTCTTCGCGGGGGGAGGAATTAGCTGCCGCTCTTCCTTCTGGTGGCTA 482 | |||||| | ||| | |||||||||| ||| || | ||||||||||||||| |||| Sbjct 2097648 ATTAGGCATCATTACTTTGTGGGGGGAGGATTTAACTACTGCTCTTCCTTCTGGTAGCTA 2097589 Query 483 AGATGT---TATTTCTTCCTTCTAGTTTCTGTCATTCGCTCTTTTCTTCTCAATGGATTG 539 |||||| |||||||| | ||||||| ||||||| || ||||| | || ||||| | Sbjct 2097588 AGATGTTATTATTTCTTTCATCTAGTTGTTGTCATTTGCCCTTTTTCTTTCGATGGAACG 2097529 Query 540 CAACTCGGTAAGCACTTTTGTAGCAAAAGTGCTTGTGGCGTTCCAGGCAGCTTCTGATGA 599 ||| || || ||||| ||||| | |||||||| | ||| | |||| Sbjct 2097528 CAAGTC------CA-------TGCAAATGTGCTGATAGCGTTCCAAGAGGCTCTTAATGA 2097482 Query 600 CAGCATTGCTGCTACTATTATCTCTGGTTGGATTTTCCTCTTCAGGATATTCTCCAGCTC 659 || |||| | ||| | | ||||||||||||| || | || ||||||||| || Sbjct 2097481 CAACATTATTTCTATAACTGTCTCTGGTTGGATACTCTGGTGCAAGATATTCTCGAGTAG 2097422 Query 660 ATCCCGATGTGGGTAAAAACGTGAGCACTCAAAGAAAACGTGCTCTGCATCTTCATTGAC 719 ||| || ||||| | ||| |||| ||||||||||||||| || | ||||||||| | || Sbjct 2097421 ATCACGTTGTGGATGAAATCGTGGGCACTCAAAGAAAACATGTTTCGCATCTTCAATTAC 2097362 Query 720 TCCTGGGCAGGATGGGCACTCTGGGGAATTATCATGCTTGGAGCGGTGGAGATACGCCCG 779 | |||||||||| ||||||| || |||||||| || || | ||||| | Sbjct 2097361 TTCTGGGCAGGACAGGCACTCCGGAGAATTATCGTGTTTAAAACGGTGTA---------- 2097312 Query 780 GAAACAGCCGTGTCCTGATAACATCTGTGTAAGATAATAGTTGACCTCACCGTGACTCCG 839 | ||||||||||||||| || ||||||||||||||||| |||||||| || Sbjct 2097311 ---------ATTTCCTGATAACATCTGCGTGAGATAATAGTTGACCTCTCCGTGACTACG 2097261 Query 840 GTTTAGCCAAACGTTGATCCTTGGTATGAGACGATGCGTCCATCTACCATTCACTGTGGC 899 ||| ||||| || | || | ||||||||||||||| ||||| ||||| ||| ||| | Sbjct 2097260 GTTCAGCCACACATCAATTCGTGGTATGAGACGATGAGTCCACCTACCCTTCTCTGCAGT 2097201 Query 900 ATCCCACTGTAGTTGCCA 917 |||||| || || ||||| Sbjct 2097200 ATCCCATTGAAGCTGCCA 2097183 >seq24 Length=2587222 Score = 309 bits (342), Expect = 3e-80 Identities = 321/421 (76%), Gaps = 0/421 (0%) Strand=Plus/Plus Query 500 TCTAGTTTCTGTCATTCGCTCTTTTCTTCTCAATGGATTGCAACTCGGTAAGCACTTTTG 559 ||||||| ||||||| | ||||| | || ||||| |||| || |||| |||| || Sbjct 2403697 TCTAGTTGTTGTCATTTACCCTTTTTCTTTCGATGGAACGCAAGTCTATAAGGACTTCTG 2403756 Query 560 TAGCAAAAGTGCTTGTGGCGTTCCAGGCAGCTTCTGATGACAGCATTGCTGCTACTATTA 619 | ||||| ||||| |||||||| | || | || ||| |||| | ||| | | Sbjct 2403757 TTGCAAATGTGCTGAGAGCGTTCCAAGAGACTCTTAATAACAACATTATTTCTATAACTG 2403816 Query 620 TCTCTGGTTGGATTTTCCTCTTCAGGATATTCTCCAGCTCATCCCGATGTGGGTAAAAAC 679 ||||||||||| | || | | ||||||||| || ||| || ||||| | ||| | Sbjct 2403817 TCTCTGGTTGGTTACTCTGGTGTAAGATATTCTCGAGTAGATCACGCTGTGGATTAAATC 2403876 Query 680 GTGAGCACTCAAAGAAAACGTGCTCTGCATCTTCATTGACTCCTGGGCAGGATGGGCACT 739 ||| ||||||||||||||| | ||| ||||||||| | ||| | |||||||| ||||||| Sbjct 2403877 GTGGGCACTCAAAGAAAACATTCTCCGCATCTTCAATTACTTCCGGGCAGGACGGGCACT 2403936 Query 740 CTGGGGAATTATCATGCTTGGAGCGGTGGAGATACGCCCGGAAACAGCCGTGTCCTGATA 799 | | ||||||||| ||||| | ||||| || || |||||||||| || |||||||||| Sbjct 2403937 CCGCGGAATTATCGTGCTTAAAACGGTGTAGGTAATCCCGGAAACACCCATGTCCTGATA 2403996 Query 800 ACATCTGTGTAAGATAATAGTTGACCTCACCGTGACTCCGGTTTAGCCAAACGTTGATCC 859 || | || || ||||||||||||||||| |||||||| ||||| ||||| || | |||| Sbjct 2403997 ACTTTTGCGTGAGATAATAGTTGACCTCTCCGTGACTACGGTTCAGCCACACATCAATCC 2404056 Query 860 TTGGTATGAGACGATGCGTCCATCTACCATTCACTGTGGCATCCCACTGTAGTTGCCATC 919 ||||||||||||||| ||||| ||||| ||| ||| | |||||| || || ||||| | Sbjct 2404057 GTGGTATGAGACGATGGGTCCACCTACCCTTCTCTGCAGTATCCCATTGAAGCTGCCAAC 2404116 Query 920 G 920 | Sbjct 2404117 G 2404117 >seq157 Length=567976 Score = 259 bits (286), Expect = 5e-65 Identities = 395/574 (69%), Gaps = 64/574 (11%) Strand=Plus/Plus Query 367 CTACCCACTAAACCCTAAACCCCTTTCTCTTCTATCCTCTGATCCCCCATGGTA-CCGCC 425 ||||| |||||| ||| || | || ||| | ||||||||||||| |||| |||| Sbjct 388611 CTACCGACTAAAACCT-----CCGCTATCATCTGTACTCTGATCCCCCACGGTATCCGCT 388665 Query 426 GTAAGGCATTTCTTCGCGGGGGGAGGAATTAGCTGCCGCTCTTCCTTCTGGTGGCTAAGA 485 || ||||||| ||||| |||||| |||||| ||||||| ||| ||| Sbjct 388666 GTTAGGCATTACTTCGTGGGGGG---------------CTCTTCTTTCTGGTAGCTTAGA 388710 Query 486 TGTTATTTCTTCCTTC---TAGTTTCTGTCATTCGCTCTTTTCTTCTCAATGGATTGCAA 542 ||||||| |||| ||| || || ||||||| || ||||| | || ||||| |||| Sbjct 388711 TGTTATTACTTCTTTCATCTAATTGTTGTCATTTGCCCTTTTTCTTTCGATGGAACGCAA 388770 Query 543 CTCGGTAAGCACTTTTGTAGCAAAAGTGCTTGTGGCGTTCCAGGCAGCTTCTGATGACAG 602 || | || |||| || ||||| ||||| | |||||||| | ||| |||| ||| Sbjct 388771 GTCTATGAGGACTTATGCTGCAAATGTGCTGATAGCGTTCCAAGAGGCTCTTGATAACAA 388830 Query 603 CATTGCTGCTACTATTATCTCTGGTTGGATTTTCCTCTTCAGGATATTCTCCAGCTCATC 662 |||| | | | | ||||||||||||| | Sbjct 388831 CATTATTTATGTAACTGTCTCTGGTTGGAT-----------------------------C 388861 Query 663 CCGATGTGGGTAAAAACGTGAGCACTCAAAGAAAACGTGCTCTGCATCTTCATTGACTCC 722 || |||| | ||| | || |||||||||||||| || || ||||||||| | ||| | Sbjct 388862 ACGCCGTGGATTAAATCATGGACACTCAAAGAAAACATGATCCGCATCTTCAATTACTTC 388921 Query 723 TGGGCAGGATGGGCACTCTGGGGAATTATCATGCTTGGAGCGGTGGAGATACGCCCGGAA 782 |||| |||| || ||||| | ||||||||| ||||| | ||||| || | |||||||| Sbjct 388922 TGGGAAGGACGGTCACTCCGAGGAATTATCGTGCTTAAAACGGTGTAGGTTAGCCCGGAA 388981 Query 783 ACAGCCGTGTCCTGATAACATCTGTGTAAGATAATAGTTGACCTCACCGTGACTCCGGTT 842 ||| || |||||||||||||| || || ||||||||||||||||| |||| || || Sbjct 388982 ACAACCATGTCCTGATAACATATGCGTGAGATAATAGTTGACCTCTCCGTATCTACG--- 389038 Query 843 TAGCCAAACGTTGATCCTTGGTATGAGACGATGCGTCCATCTACCATTCACTGTGGCATC 902 | | |||| ||||||||||||||| ||||| |||| |||| ||| | ||| Sbjct 389039 --------CATCAATCCGTGGTATGAGACGATGGGTCCACCTACGATTCTCTGCAGTATC 389090 Query 903 CCACTGTAGTTGCCATCGACTTATGCTCCTCCGT 936 ||| || || ||||| || |||||| || || Sbjct 389091 CCATTGAAGCTGCCAACGTGCGATGCTCTTCTGT 389124 >seq156 Length=650633 Score = 163 bits (180), Expect = 3e-36 Identities = 197/264 (75%), Gaps = 12/264 (5%) Strand=Plus/Minus Query 367 CTACCCACTAAACCCTAAACCCCTTTCTCTTCTATCCTCTGATCCCCCATGGTA-CCGCC 425 ||||| |||||| ||| || | || ||| | |||||||| |||| |||| |||| Sbjct 500288 CTACCGACTAAAACCT-----CCGCTATCCTCTGTACTCTGATCTCCCACGGTATCCGCA 500234 Query 426 GTAAGGCATTTCTTCGCGGGGGGAGGAATTAGCTGCCGCTCTTCCTTCTGGTGGCTAAGA 485 || ||||||| |||| ||||| ||| |||||| | ||||||||||||||| ||||||| Sbjct 500233 GTTAGGCATTAATTCGTGGGGGTAGGGTTTAGCTACTGCTCTTCCTTCTGGTAGCTAAGA 500174 Query 486 TGTTATT----TCTTCCTTCTAGTTTCTGTCATTCG-CTCTTTTCTTCTCAATGGATTGC 540 ||||||| |||| | ||||||| ||||||| | || ||||||| | ||||| || Sbjct 500173 TGTTATTACTGTCTTTCATCTAGTTGTTGTCATTTGCCTTTTTTCTT-TGGATGGAACGC 500115 Query 541 AACTCGGTAAGCACTTTTGTAGCAAAAGTGCTTGTGGCGTTCCAGGCAGCTTCTGATGAC 600 || || | || |||| ||| ||||| | ||| |||||||||| | ||| ||||||| Sbjct 500114 AAGTCTATGAGGACTTCTGTTGCAAATGGGCTGATGGCGTTCCAAGAGGCTCTTGATGAC 500055 Query 601 AGCATTGCTGCTACTATTATCTCT 624 | |||| | ||| | | ||||| Sbjct 500054 AACATTATTTCTATAACTGTCTCT 500031 >seq55 Length=1655507 Score = 131 bits (144), Expect = 2e-26 Identities = 125/158 (79%), Gaps = 4/158 (3%) Strand=Plus/Plus Query 403 CTCTGATCCCCCATGGTA-CCGCCGTAAGGCATTTCTTCGCGGGGGGAGGAATTAGCTGC 461 ||||||||||||| |||| ||||||| ||||||| ||||| |||| | ||| |||||| | Sbjct 864174 CTCTGATCCCCCACGGTATCCGCCGTTAGGCATTACTTCGTGGGGAGTGGATTTAGCTAC 864233 Query 462 CGCTCTTCCTTCTGGTGGCTAAGATGTTATTTCTTC---CTTCTAGTTTCTGTCATTCGC 518 ||||||||||||| | |||||||||||||||||| | ||||||| ||||||| || Sbjct 864234 TGCTCTTCCTTCTGATACCTAAGATGTTATTTCTTCTTTCATCTAGTTGTTGTCATTTGC 864293 Query 519 TCTTTTCTTCTCAATGGATTGCAACTCGGTAAGCACTT 556 ||||| | | ||||| |||| || | || |||| Sbjct 864294 CCTTTTTCTTTTGATGGAACGCAAGTCTATGAGGACTT 864331 >seq708 Length=42919 Score = 118 bits (130), Expect = 1e-22 Identities = 146/195 (75%), Gaps = 10/195 (5%) Strand=Plus/Plus Query 398 CTATCCTCTGAT----CCCCCATGGTACCGCCGTAAGGCATTTCTTCGCGGGGGGAGGAA 453 ||||||||||| ||||| | || |||| ||||||| ||||| ||||| || Sbjct 18132 CTATCCTCTGACTCTGCCCCCCGTTTTCCCCCGTTAGGCATTACTTCGTGGGGGAAGTT- 18190 Query 454 TTAGCTGCCGCTCTTCCTTCTGGTGGCTAAGATGTTAT---TTCTTCCTTCTAGTTTCTG 510 |||||| | ||||||||||||||| ||||||||||||| ||||| | ||||||| || Sbjct 18191 TTAGCTACTGCTCTTCCTTCTGGTAGCTAAGATGTTATAACTTCTTTCATCTAGTTGTTG 18250 Query 511 TCATTCGCTCTT-TTCTTCTCAATGGATTGCAACTCGGTAAGCACTTTTGTAGCAAAAGT 569 ||||| || ||| ||||| || ||||| ||| | | || |||| ||| ||||| || Sbjct 18251 TCATTTGCCCTTCTTCTT-TCGATGGAACACAAGTTTATGAGGACTTCTGTTGCAAATGT 18309 Query 570 GCTTGTGGCGTTCCA 584 ||| | |||| ||| Sbjct 18310 GCTGATAGCGTACCA 18324 >seq3186 Length=1548 Score = 102 bits (112), Expect = 8e-18 Identities = 134/185 (72%), Gaps = 12/185 (6%) Strand=Plus/Minus Query 15492 TTTTTTGGAATAACTTTCAAATAGCTCTACCGATCAAT-------TCCAAAAACTAATCA 15544 |||||||| |||| || ||| || || |||||||| |||| |||||||||| Sbjct 1027 TTTTTTGGGATAAATTCTAAACGCCTATATCGATCAATATCCATATCCATAAACTAATCA 968 Query 15545 GCTCTTAACATCAAAAAACCACGTCGATTGCCACCAAGCTGGTCAAAATCGGTTGATTCG 15604 || |||||| ||| || || ||| ||||| || | || | ||||||||||| | ||| Sbjct 967 GCACTTAACCTCACAATACTACGCCGATTACCGCAAACCGGGTCAAAATCGATCAATTTT 908 Query 15605 TTCGAGAGATATCGTGAACGAAAGAAAACCGAAAAAATTG---TTTTTTCGGGATTACTC 15661 | | ||| ||||| |||||||||| || |||||||| |||||| | || |||| Sbjct 907 CTTGCAAGAAATCGTTGACGAAAGAAATCC--AAAAATTGATTTTTTTTTGAAATAACTC 850 Query 15662 CGAAA 15666 |||| Sbjct 849 TGAAA 845 Score = 91.5 bits (100), Expect = 2e-14 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 15492 TTTTTTGGAATAACTTTCAAATAGCTCTACCGATCAATTCCAAAAACTAATCAGCTCTTA 15551 ||||||| ||||||| | ||| || |||||| ||||| || | ||||||||| | Sbjct 865 TTTTTTGAAATAACTCTGAAACGACTTGACCGATTAATTCTGAAGAGTAATCAGCTTTCG 806 Query 15552 ACATCAAAAAACCACGTCGATTGCCACCAAGCTGGTCAAAATCGGTTGATTCGTTCGAGA 15611 || ||||| ||||||||| || | || | | |||||||||||||| | ||||| || Sbjct 805 ACTCTGAAAAATCACGTCGATGGCTGCAAACCGGCTCAAAATCGGTTGAATGGTTCGTGA 746 Query 15612 GATATCGT 15619 |||||||| Sbjct 745 GATATCGT 738 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 50947117456792