Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zeugodacus_20cucurbitae_20[refseq_20GCF_5F000806345.1_202014-12-23] 5,572 sequences; 374,820,345 total letters Query= NC_008953.1 Length=3935 Score E Sequences producing significant alignments: (Bits) Value seq38 104 6e-19 >seq38 Length=2092895 Score = 104 bits (114), Expect = 6e-19 Identities = 111/147 (76%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 3334 CCCATGAAGCGAGTCTTTCCAACAATCACTCGATGTACTTTTCACAAATACGGTCCTTCG 3393 || ||| ||| |||||||| | | |||| |||||| || |||||||||||||| || Sbjct 1696389 CCGATGGCGCGTGTCTTTCCCAAAGTCACCAAATGTACATTCCACAAATACGGTCCATCT 1696330 Query 3394 GGCTCCCTGGAAAACTACGAGGGACTCTGCATCCTCCCGGAGAACGTGGTCAACGAGAAG 3453 || || || |||| | ||| || ||||| | | ||| ||| | ||||| ||||| Sbjct 1696329 GGTTCGGTGCAAAAGTTCGACGGTCTCTGTGTGTTGCCGCTGAATATTGTCAATGAGAAA 1696270 Query 3454 ATCTACATTTTCCTCTGGTTCTGGTTC 3480 |||||| ||||||| |||||||||||| Sbjct 1696269 ATCTACGTTTTCCTATGGTTCTGGTTC 1696243 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12479239422000