Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zeugodacus_20cucurbitae_20[refseq_20GCF_5F000806345.1_202014-12-23] 5,572 sequences; 374,820,345 total letters Query= NC_009904.1 Length=142072 Score E Sequences producing significant alignments: (Bits) Value seq884 158 1e-33 >seq884 Length=19560 Score = 158 bits (174), Expect = 1e-33 Identities = 166/216 (77%), Gaps = 7/216 (3%) Strand=Plus/Minus Query 112985 TTTTAACCAACCCAAAACAATTTGTTGATTCTCACTTAGCTCTACTTGGTC--TACCTTA 113042 ||| |||||| ||| ||||| || ||||| || | || ||| ||| || |||| | Sbjct 3598 TTTCAACCAATCCAGCACAATCTGCTGATTTTCGTTGAGTTCTGGTTGTTCAATACC--A 3541 Query 113043 TCATCAGTGTATTTGAACCAGATTTTCTCATATGTTGTTTGTCCGCCTGTGATTGTTACA 113102 |||||| ||||||||||| ||||| ||||| | ||| | || ||||| ||| || | Sbjct 3540 TCATCA---TATTTGAACCAAATTTTTTCATAGGATGTATACCCACCTGTAATTTGTATA 3484 Query 113103 AATTCGGCGCTTGGTTGCTCATTTTGAAATTTTTCTAGTTGTTCTTCGTAATGTATATCC 113162 ||||| || || | || || |||||||||| ||||| ||||||||| || || ||||| Sbjct 3483 AATTCAGCATTTTGGTGTTCCTTTTGAAATTGTTCTATTTGTTCTTCATAGTGAATATCA 3424 Query 113163 CCAACATCAAATTCTTTAAATTTAATCATTGTACTC 113198 || ||||||||||||||||| ||||||||| | ||| Sbjct 3423 CCGACATCAAATTCTTTAAACTTAATCATTCTGCTC 3388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 454470743907840