Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zeugodacus_20cucurbitae_20[refseq_20GCF_5F000806345.1_202014-12-23] 5,572 sequences; 374,820,345 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq162 87.8 2e-12 >seq162 Length=508180 Score = 87.8 bits (96), Expect = 2e-12 Identities = 123/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 171907 ATCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACACGGTTCAAGGAGATTGATATT 171966 |||||| |||||| |||||||| || || ||||||| ||| || || | ||| ||||| Sbjct 425996 ATCTTTACCACCCTGTAGACGCGTACCGAACTGACCACGCGGCTCGAGTAAATTAATATT 425937 Query 171967 GTTTGAACCCATGTAGTCATTGGCCAACTTGACAATCGTATCCGCGAGGGAGACTTCACC 172026 ||||| || | |||| | ||||| ||||| || || || || || | || || Sbjct 425936 ATTTGAGCCAACATAGTTTTGCGCCAAATTGACTATGGTGGCCTGCAGTGACATCTCTCC 425877 Query 172027 GTGATGGTAGGCCGACTTGTCCGCGACATACGCCGCCAACTGTGCCACCTTCA 172079 ||||||||||| ||| | || || ||| | | | ||| || || || |||| Sbjct 425876 ATGATGGTAGGCGGACATTTCAGCCACAGAACCAGACAATTGCGCAACTTTCA 425824 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597311994321760