Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zeugodacus_20cucurbitae_20[refseq_20GCF_5F000806345.1_202014-12-23] 5,572 sequences; 374,820,345 total letters Query= NC_011222.1 Length=44929 Score E Sequences producing significant alignments: (Bits) Value seq273 91.5 4e-14 >seq273 Length=32108 Score = 91.5 bits (100), Expect = 4e-14 Identities = 108/144 (75%), Gaps = 2/144 (1%) Strand=Plus/Minus Query 28678 TATGTTCATCCTCAAAACGGACAAGAATA-CCCAATGTTCATAATGAATAGAGACGGTTT 28736 ||||||||||| |||||| |||| || | | | ||| || |||||| | ||||| || Sbjct 28431 TATGTTCATCCGCAAAACAAACAATCTTATCGCCAAGTT-ATCATGAATCGCGACGGCTT 28373 Query 28737 TACATTGTTGGCAATGGGATTCACCGGAGAAAAGGCACTCCAATTTAAGTTGGAGTATAT 28796 || || || |||||||| ||||| || |||||||| | || || || || | ||||| Sbjct 28372 CACTTTATTAGCAATGGGGTTCACTGGTCAAAAGGCATTGCAGTTCAAACTGAAATATAT 28313 Query 28797 TAACGCATTTAACAAAATGGAAAA 28820 | | || ||||| |||||||||| Sbjct 28312 TGAGGCTTTTAATCAAATGGAAAA 28289 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143641694959224