Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zeugodacus_20cucurbitae_20[refseq_20GCF_5F000806345.1_202014-12-23] 5,572 sequences; 374,820,345 total letters Query= NC_011588.1 Length=127615 Score E Sequences producing significant alignments: (Bits) Value seq45 95.1 1e-14 >seq45 Length=1794600 Score = 95.1 bits (104), Expect = 1e-14 Identities = 203/300 (68%), Gaps = 10/300 (3%) Strand=Plus/Minus Query 7475 GCAATGTTAAACGGTACTCCAAGCATTAGGTCCGCACTGCGTTGATATAATTGTGCCGAT 7534 ||||| || || ||||| || | | ||| ||||| ||||| |||||||| || Sbjct 1449764 GCAATATTGAATGGTACACCTAATCCCATGTCAGCACTACGTTGGTATAATTGACAAGAC 1449705 Query 7535 AATTCTCCATTTACAGTATTCACGTGAAATTGTACGAGAATGTGACATGGAGGAAGAGCC 7594 || |||||||| || || ||||||| | ||| ||||| || || |||||| Sbjct 1449704 AACTCTCCATTGGCA------ACAAAAAATTGTGCAAGACAATGACAAGGGGGCAGAGCC 1449651 Query 7595 ATTTTGTCCAAGTCTACCGGATTCCACGCGCTCATTATAATGCGACGACTTGTAGGGTCC 7654 |||| | || || ||||||||||| ||||||||| || ||| | || | Sbjct 1449650 ATTTGAGGTATATCGACAGGATTCCACGCAGACATTATAATACGTCGATCATTTGGATTG 1449591 Query 7655 TCTTTGATGGTGCGAATCACTTGTTGCAATTGGTCGACCCCTTTA--TTCGTATAGTCCG 7712 | | |||| ||| |||||||| || | ||| || || || | | || ||| | | Sbjct 1449590 TTTCTGATTGTGTTAATCACTTCCTGAAGTTGATCCACTCCCTCACCTTTGTA-ACTGTC 1449532 Query 7713 TGTTACAATCAACGTACGATGCGCCAAAATGCCTCCATTGAAAACCGTAAATCGGACCTA 7772 | || |||| |||| || |||||||| | ||||||||||||||||| ||||||| Sbjct 1449531 T-TTGCAATTCCTGTACTTGGCCCCAAAATGACGCCATTGAAAACCGTAAACTGGACCTA 1449473 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408215476714592