Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zeugodacus_20cucurbitae_20[refseq_20GCF_5F000806345.1_202014-12-23] 5,572 sequences; 374,820,345 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq162 109 7e-19 >seq162 Length=508180 Score = 109 bits (120), Expect = 7e-19 Identities = 128/173 (74%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 175927 ATCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACATGGCTCAAGGAGATTGATATT 175986 |||||| |||||| |||||||| || || ||||||| ||||| || | ||| ||||| Sbjct 425996 ATCTTTACCACCCTGTAGACGCGTACCGAACTGACCACGCGGCTCGAGTAAATTAATATT 425937 Query 175987 GTTTGAGCCCATATAGTCATTCGCCAACTTGACAATCGTATCCGCGAGGGAGACTTCACC 176046 |||||||| | ||||| | |||||| ||||| || || || || || | || || Sbjct 425936 ATTTGAGCCAACATAGTTTTGCGCCAAATTGACTATGGTGGCCTGCAGTGACATCTCTCC 425877 Query 176047 GTGATGGTAGGCCGACTTGTCCGCCACATACGCCGCCAACTGCGCCACCTTCA 176099 ||||||||||| ||| | || |||||| | | | ||| ||||| || |||| Sbjct 425876 ATGATGGTAGGCGGACATTTCAGCCACAGAACCAGACAATTGCGCAACTTTCA 425824 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613464469223520