Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zeugodacus_20cucurbitae_20[refseq_20GCF_5F000806345.1_202014-12-23] 5,572 sequences; 374,820,345 total letters Query= NC_013646.1 Length=38764 Score E Sequences producing significant alignments: (Bits) Value seq1321 697 0.0 seq884 522 7e-144 seq5340 468 1e-127 seq273 459 7e-125 seq641 248 2e-61 seq3605 241 3e-59 >seq1321 Length=4872 Score = 697 bits (772), Expect = 0.0 Identities = 598/739 (81%), Gaps = 0/739 (0%) Strand=Plus/Plus Query 37036 TTATGGATTGCTGCGTATCCTATCGATGGTGTGTCACCATATCCATTGTATGCTTATTTC 37095 |||||||| || | ||||| ||| ||| |||| |||||| || |||||| Sbjct 2395 TTATGGATGGCAGAATATCCAGATTATGAAGTGACACCTTATCCAAATTACAATTATTTT 2454 Query 37096 CCAAGCATGGATGGTATCGCAATTTGGCAATTTACCTCCACTTATATTGCTGGTGGGTTA 37155 || | || ||||| |||| || || || || || || |||| || ||| || Sbjct 2455 CCTTCATTTGAAAATATCGGTATTTTTCAGTTCACGTCAACCTACGTTGCAGGAGGGCTA 2514 Query 37156 GATGGGAATGTTGATTTAACAGGTATTACTGATAATGGCTACACAGATACAGATAAGCCA 37215 ||||| || ||||||||||||||||||||||||||||| || ||| | | | | ||| Sbjct 2515 GATGGTAACGTTGATTTAACAGGTATTACTGATAATGGTTATACAAAGAATAACCAACCA 2574 Query 37216 GAGACGGACACACCAGCAACAGATGCAGGTAAAGAAACTGAAGATACGCCTAATACTGCA 37275 | || |||||||||||| |||||||| || || ||| ||||||| | | | | Sbjct 2575 GCAACAAACACACCAGCAATTGATGCAGGGGAAAAAGTCGAAAATACGCCAAGTTCCGAT 2634 Query 37276 GTAAAAGTCGGTGACACAGTTAAAGTGAAATTTAATGTTGATGCTTGGGCAACTGGCGAA 37335 || |||||||| || || |||||||||||||||| |||||||||||||| || || ||| Sbjct 2635 GTTAAAGTCGGCGATACTGTTAAAGTGAAATTTAGCGTTGATGCTTGGGCTACAGGTGAA 2694 Query 37336 GCTATTCCAGATTGGGTAAAAGGAAACAGCTACAAAGTGCAAGAAGTAACTGGAAGTAGA 37395 |||||||| | |||||||||||||||||||||||||||||||||| ||||| || ||| Sbjct 2695 GCTATTCCGCAATGGGTAAAAGGAAACAGCTACAAAGTGCAAGAAGCAACTGAGAGCAGA 2754 Query 37396 GTATTGCTAGAAGGCATTTTGTCGTGGATTAGCAAAGGGGATATTGAACTATTGCCAGAT 37455 |||||||| |||||||| ||||| ||||| |||||||| ||||||||| ||||||||||| Sbjct 2755 GTATTGCTTGAAGGCATCTTGTCATGGATCAGCAAAGGCGATATTGAATTATTGCCAGAT 2814 Query 37456 GCAACAGTCGTCCCTGATAAGCAACCAGAAGCAACTCATGTGGTACAATACGGTGAAACG 37515 || | || |||||||| |||||||||||||| || ||| ||||||| ||||||||| Sbjct 2815 GCGGTAACTGTTCCTGATAAACAACCAGAAGCAACACACGTGATACAATATGGTGAAACG 2874 Query 37516 TTATCCAGCATTGCTTATCAATATGGAACAGACTATCAAGCGTTGGCGGCATTAAATGGA 37575 ||||||||||||||||| ||| ||||||||||||||||| |||| || | |||||||| Sbjct 2875 TTATCCAGCATTGCTTACCAACATGGAACAGACTATCAAACGTTAGCTTCGCTAAATGGA 2934 Query 37576 TTGACAAATCCAAATCTAATCTATCCTGGTCAAGTTTTGAAAGTTAACGGATCAGCAGTA 37635 ||||||||||| ||| | || ||||||||||||||||||||||| || |||||||||||| Sbjct 2935 TTGACAAATCCTAATTTGATTTATCCTGGTCAAGTTTTGAAAGTCAATGGATCAGCAGTA 2994 Query 37636 AGCAATGTTTACACGGTTCAATACGGCGACAATTTATCAAGTATTGCAACCAAACTAGGC 37695 ||||| ||||| || || ||||| || || ||||||||||||||||| | ||||| ||| Sbjct 2995 AGCAACGTTTATACAGTCCAATATGGTGATAATTTATCAAGTATTGCGGCTAAACTTGGC 3054 Query 37696 ACGACATACCAAGCTCTAGCGCAACGGAACGGATTAGCAAATCCTAACTTAATTTATCCA 37755 ||||| || |||||| |||| |||||||||||||||| |||||||||||||||||||| Sbjct 3055 ACGACTTATCAAGCTTTAGCACAACGGAACGGATTAGATAATCCTAACTTAATTTATCCT 3114 Query 37756 GGGCAAACATTGAACTATT 37774 || |||||||||||||||| Sbjct 3115 GGTCAAACATTGAACTATT 3133 Score = 360 bits (398), Expect = 5e-95 Identities = 359/469 (77%), Gaps = 3/469 (1%) Strand=Plus/Plus Query 36266 ATGATACTACCAGACAAGTATTACAAAATTATCAAATGGGGAGTACTTACGGTGCTTCCT 36325 ||||| |||||||| |||||||| ||||| ||||||||||||||||| || ||||||||| Sbjct 1689 ATGATTCTACCAGATAAGTATTATAAAATCATCAAATGGGGAGTACTAACCGTGCTTCCT 1748 Query 36326 GCGGGATCTGTTTTAGTAGCTACGTTAGGTAAAGCTTATGGGTGGCAACAAACAGATACG 36385 || | |||||||||||||| || ||||| ||||| || || ||||||||||| |||| | Sbjct 1749 GCTAGTTCTGTTTTAGTAGCAACTTTAGGCAAAGCCTACGGTTGGCAACAAACCGATATG 1808 Query 36386 GCAGTGTTGACTATTAACGCTTTATCAGCATTTTTAGGAGTTGTAACAGGCGTGTCAGCA 36445 | || || ||||| || ||| | || | ||||||||||| |||||||||||||||||| Sbjct 1809 GTTGTTTTAACTATCAATGCTATTGCAACTTTTTTAGGAGTAGTAACAGGCGTGTCAGCA 1868 Query 36446 TATAACTTAAAAGACAAGNNNNNNNNNNNNNNNNNNNNNNNNTTTTAGTAGGAGCGCTAG 36505 || || |||||||||||| ||||||| |||||| || Sbjct 1869 TACAATTTAAAAGACAAG-GAGTAAACGAATGAAAAAGAAAATTTTAGTTGGAGCGTTAA 1927 Query 36506 TCGCTCTATTTTTTATGCCTTTGAATGTATTTGCTGCAAAAGGTGACCAAGGTGTGGATT 36565 |||||||||||||||||||||| |||||||||||||| ||||| || ||||| || |||| Sbjct 1928 TCGCTCTATTTTTTATGCCTTTAAATGTATTTGCTGCTAAAGGCGATCAAGGCGTTGATT 1987 Query 36566 GGGCGATTTATCAAGGTGACCAAGGTCGCTTTGGTTATGCACATGATAAATTCGCTATCG 36625 | | |||| | || || |||| |||||||||||||||||||||||| | || Sbjct 1988 TGTCTATTTGGAATGGGGATCAAGCAACATTTGGTTATGCACATGATAAATTCTCAATTT 2047 Query 36626 CTCAAATTGG-CGGCTACAATGCTAGTGGTATTTATGAACAATACACATACAAAACGCAA 36684 | |||||||| ||| | | ||| ||| |||||||| ||| || || | ||| Sbjct 2048 CACAAATTGGTGGGCAAAACAACTA-TGGGATTTATGATCAAGTTACTTATTCTAGTCAA 2106 Query 36685 GTAGCAAGTGCCATTGCTCAAGGAAAACGAGCGCATACCTATATTTGGT 36733 ||||| ||| | ||||||||||| |||||||||||||| ||| | |||| Sbjct 2107 GTAGCTAGTACGATTGCTCAAGGTAAACGAGCGCATACGTATGTATGGT 2155 Score = 132 bits (146), Expect = 1e-26 Identities = 75/76 (99%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 37849 GGACCATTAGCTCAGTTGGTTAGAGCCAACCGCTCATAACGGTTAGGTCATAGGTTCGAG 37908 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 4366 GGACCATTAGCTCAGTTGGTTAGAGCCAACCGCTCATAACGGTTAGGTCACAGGTTCGAG 4425 Query 37909 TCCTGTATGGTCCATA 37924 |||||||||||||||| Sbjct 4426 TCCTGTATGGTCCATA 4441 >seq884 Length=19560 Score = 522 bits (578), Expect = 7e-144 Identities = 322/341 (94%), Gaps = 6/341 (2%) Strand=Plus/Plus Query 11615 CAGAAATGTTTGGGAGGACAGATGGAACTATGGCGATTAAAGGAAGAAGCAAGTTTGACT 11674 ||||| |||| |||||||| || || |||||||||||||| | |||||||||||||| Sbjct 3067 CAGAACTGTT--GGAGGACAAAT--AA--ATGGCGATTAAAGGTAAAAGCAAGTTTGACT 3120 Query 11675 TTGAAGTGTTTAAAGGGGATTTCAATAATTGGATGGGCTTCAATAAACAAAAATATACCA 11734 ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 3121 TTGAAGTGTTTAATGGGGATTTCAATAATTGGATGGGATTCAATAAACAAAAATATACCA 3180 Query 11735 GGGAACAAGCAATAGATGAATGGCGGTCAGAACTAATGCTTGACGAAAATACACCTTATA 11794 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct 3181 GGGAACAAGCAATAGATGAATGGCGGTCAGAACTAATGCTTGACGAAGATACACCTTACA 3240 Query 11795 TCATAGAAGATGCATTTGTTAGATATCGTTTCGGAGTAGACGAAGACAATGAGAACCGTA 11854 | || |||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3241 TTATTGAAGATGCGTTTGTTAGATATCGTTTCGGAGTAGACGAAGACAATGAGAACCGTA 3300 Query 11855 GTTGCTGGTGGTTAGAATGGCGAGATTGTGGTCATAGGTCTGTACCTGTCTGGTCCATTA 11914 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3301 GTTGCTGGTGGTTAGAATGGCGAGATTGTGGTCATAGGTCTGTACCTGTCTGGTCCATTA 3360 Query 11915 GAACGCCTTTTCCGTGGGAATTGGAGGGAACAGAATGAGTA 11955 ||||||||||||||||||||||||||||| |||||||| || Sbjct 3361 GAACGCCTTTTCCGTGGGAATTGGAGGGAGCAGAATGATTA 3401 Score = 280 bits (310), Expect = 4e-71 Identities = 169/178 (95%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 12258 CATGTCTTACAAGCGTTTAGCCGGTGGGCTATTGAACAGGAGGAAGGATAATGGGAGAAA 12317 || ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 3713 CAAGTCTTACAAGCGTTTAGCCGGTGGGCTATTGAATAGGAGGAAGGATAATGGGAGAAA 3772 Query 12318 TTGCAGAAATGATGTTGGAAGGTGTCTTATGTGCAAGTTGTGGAGTATTCCTTGATGTAG 12377 ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct 3773 TTGCAGAAATGATGTTGGAAGGTGTCTTATGTGCAGGTTGTGGTGTATTCCTTGATGTAT 3832 Query 12378 ATGGGAATGGGTATCCTGAATATTGTGAAGATTGCCAAGAACAAATAATCGAGGAGGA 12435 |||||||||||||||| |||||||| || |||||||||||||||||||||||||| || Sbjct 3833 ATGGGAATGGGTATCCCGAATATTGCGAGGATTGCCAAGAACAAATAATCGAGGAAGA 3890 Score = 224 bits (248), Expect = 2e-54 Identities = 157/179 (88%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 13366 AGTTATCCAGAAGTTTATATTTTAGGGCGACAAGTCGATGACGTTTGTGTTGAATACCTG 13425 |||||||||||| | ||||| | || || ||||| || | ||||| |||||| |||||| Sbjct 5504 AGTTATCCAGAATTATATATACTGGGACGTCAAGTAGACGGCGTTTATGTTGAGTACCTG 5563 Query 13426 CGCGGATCAGAGCAAGCCGATTTATTTTTCGATTATACGATAGCTCGTGATGAAAGAAAT 13485 | |||||||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct 5564 CATGGATCAGAGCAAGCCGATTTATTTTTCGATTATACGATTGCTCACGATGAAAGAAAT 5623 Query 13486 CATATGAATAAAAGCAATACAAAAGATGGCGAATGGAGAATTTTAAAATATGGGAGGCC 13544 ||||||||||||| ||||||||||||||||||||||| |||||| |||||||| || || Sbjct 5624 CATATGAATAAAACCAATACAAAAGATGGCGAATGGAAAATTTTGAAATATGGTAGACC 5682 Score = 100 bits (110), Expect = 7e-17 Identities = 57/58 (98%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 10426 GAAAGGAGTGGAGGTTTGGTCGACCACAAAGAATTCTTTACTCCTTTGGAATGATGAA 10483 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1893 GAAAGGAGTGGAGGTTTGGTCGACCACAAAGAATTCTTTACTCCTTTGAAATGATGAA 1950 Score = 84.2 bits (92), Expect = 5e-12 Identities = 51/54 (94%), Gaps = 0/54 (0%) Strand=Plus/Plus Query 11424 CAATCAACAGGGTTGAAAGACAAGAACGGCGTTGAAATTTTTGAGGGTGATGTA 11477 ||||| ||||||||||||||||||||||||||||||||||||||||| ||| || Sbjct 2853 CAATCCACAGGGTTGAAAGACAAGAACGGCGTTGAAATTTTTGAGGGGGATTTA 2906 >seq5340 Length=1013 Score = 468 bits (518), Expect = 1e-127 Identities = 432/546 (79%), Gaps = 32/546 (6%) Strand=Plus/Minus Query 3280 GAAAGGATGGCGAAAAACAAAATGAACAATTTAGTAATAATGAAAAATCACCAAGCAGTA 3339 ||||||| || ||||||||||||||||||||||||| |||||| | | ||||| ||| Sbjct 530 GAAAGGAAGG---AAAACAAAATGAACAATTTAGTAATTATGAAAGACAAACAAGCGGTA 474 Query 3340 ACAAGTAGTTTACAAGTTGCTGAAGTTTTTGGCAAAGAACACAAAGTTGTTCTAAAAGCC 3399 ||||||||| | |||||||||||||| || | || ||||||||| ||| || | || Sbjct 473 ACAAGTAGTCTGCAAGTTGCTGAAGTATTCGATAAGCAACACAAAGATGTATTAGAGGCA 414 Query 3400 ATTGATGAAATAAAACAGGGGGTGGCACAAAATTATGCCGA---------CCTATTTTAC 3450 |||||| | || || || || |||||| || | | | ||| Sbjct 413 ATTGATACGAAAATTCAATCGGCGG---AAAATTCCGCTCATTACCAAATCATGTTTGCT 357 Query 3451 GAAG----ATACCTACATTCATCC---ACAAAACAAACAATCTTATCGCCAAGTAATTAT 3503 || | |||| | ||||| | ||| |||| | | | | || || Sbjct 356 GAGGGAGAATACAAAGATTCAAGAGGTAGAAAGCAAAGATTGT--------ATTAC--AT 307 Query 3504 GAACCGTGACGGATTTACATTATTAGCAATGGGATTCACAGGTCAAAAAGCTTTGCAATT 3563 ||| ||||| || ||| | || | ||| | ||||||||||| ||||||| ||| Sbjct 306 GAATCGTGATGGCTTTTCTTTTATTGCATTTGGATTCACAGGCAAAAAAGCAGATACATT 247 Query 3564 TAAATTGAAATATATTGAAGCTTTCAATCAAATGGAAAAAGAAATTCAACAGCCTAAACT 3623 ||| ||||||||||||||||||| |||| |||||||||||||||||||||||||||||| Sbjct 246 CAAACTGAAATATATTGAAGCTTTTAATCTAATGGAAAAAGAAATTCAACAGCCTAAACT 187 Query 3624 TCCAACCTCGCAAAGAGAATTGGCGATGCTTGCTTTATCAGCAAATGAAGAAACAAATGA 3683 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 186 TCCAACCTCGCAAAGAGAATTGGCGATACTTGCTTTATCAGCAAATGAAGAAACAAATGA 127 Query 3684 GCGTGTAGATGTAATCGAAAAAGAAGTAGCCAACTTAAAAGACAATCAAAAAATCGGTGC 3743 ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| Sbjct 126 GCGTGTAGATGTAATAGAAAAAGAAGTAGCCGACTTAAAAGACAATCAAAAAATCGGTGC 67 Query 3744 AGATGATTATAGCTACTTATCACGTCGAGTTCATCAACGAGTAGCAGAAGTTGCAAGAGG 3803 |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| ||| Sbjct 66 AGATGATTATGGCTACTTATCACGCCGAGTTCATCAACGAGTAGCAGAAGTTGCAAAAGG 7 Query 3804 ATTTGG 3809 |||||| Sbjct 6 ATTTGG 1 >seq273 Length=32108 Score = 459 bits (508), Expect = 7e-125 Identities = 380/464 (82%), Gaps = 0/464 (0%) Strand=Plus/Minus Query 13918 ACATAGTTATTATACCACAAAAGGAGCGATTTCACTTGATTCAATTGCTAAAAGAAGTAG 13977 |||| | ||||||| || |||||||||||||| |||||||||||||| |||||||||| | Sbjct 18371 ACATTGATATTATAACATAAAAGGAGCGATTTAACTTGATTCAATTGTTAAAAGAAGTTG 18312 Query 13978 ATTTTCGACAAACAAAAGTGAATGCTAGAAATGTGTTGAAGAATTTTAGACGTTTAGAGC 14037 |||| | || || | || ||||| ||| |||||||| |||||||||||||| || | Sbjct 18311 ATTTCAGTCAGACTAGAGCCAATGCGAGAGCCGTGTTGAAAAATTTTAGACGTTTGGACC 18252 Query 14038 GAATAGCTGGTCGCTCTTTGATAGATTTAAAATCACCAATTATTACAGATATGCCTAAAA 14097 ||||||||||||| || || ||||| | || ||||| |||||||| ||||| ||| Sbjct 18251 GAATAGCTGGTCGTTCCTTAGTAGATGTTCGGTCGCCAATAATTACAGACATGCCCAAAG 18192 Query 14098 GCCAAAGTCATGGGAACAAATCAGAAGATGCGCTAGTACAATTAGCAGATGCAGAAGCAG 14157 | || ||||| |||||| ||||||||||| | | || | |||| |||| || Sbjct 18191 GTATAAAGCATGGCAACAAAGCAGAAGATGCGTTGATCCAGATGATTGATGTCGAAGTAG 18132 Query 14158 AAAGAGATGCAATTTTATCTGCACTTATGGCTTTGAGTTTGACTAGTAGACAAATTCTGC 14217 | | |||||||| || | || | ||| | | || | | ||| | |||||||| | Sbjct 18131 AGCGTGATGCAATCCTAACGGCTTTGATGTCACTAAGCATTATAAGTCGTCAAATTCTTC 18072 Query 14218 ACTACAGTTTTTGTGTGCAGGATCATTACTCTAATTACAAGATTGCTAGAGAAGTTGGAT 14277 ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| | Sbjct 18071 ACTACAGTTTTTGCGTGCAGGACCATTACTCTAATTACAAGATTGCTAGAGAAGTTGGCT 18012 Query 14278 ATTCTGAAAGAAGTATTCAACGCATGAAATCAGAAGCTTTGATTGAATTCGCGGAAGCTT 14337 |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 18011 ATTCCGAAAGAAGTATTCAACGCATGAAATCAGAAGCTTTGATTGAATTCGCAGAAGCTT 17952 Query 14338 ACCGAAATGGCAAAATAATTGCATATAAATAATTTTTGGCGGTT 14381 |||| ||||||||||||||||||||||||||||||||||||||| Sbjct 17951 ACCGCAATGGCAAAATAATTGCATATAAATAATTTTTGGCGGTT 17908 Score = 441 bits (488), Expect = 2e-119 Identities = 347/413 (84%), Gaps = 2/413 (0%) Strand=Plus/Minus Query 3281 AAAGGATGGCGAAAAACAAAATGAACAATTTAGTAATAATGAAAAATCACCAAGCAGTAA 3340 ||| || || || ||||| ||| ||||| |||||||||||||||| | |||| |||| Sbjct 28608 AAATGAAGG-GAGAAACAGAATATGCAATT-AGTAATAATGAAAAATAAACAAGTGGTAA 28551 Query 3341 CAAGTAGTTTACAAGTTGCTGAAGTTTTTGGCAAAGAACACAAAGTTGTTCTAAAAGCCA 3400 ||||||||||||||||||||||| ||| | ||| | || ||| |||| || |||||| Sbjct 28550 CAAGTAGTTTACAAGTTGCTGAAACATTTAGAAAACAGCATAAACATGTTTTAGAAGCCA 28491 Query 3401 TTGATGAAATAAAACAGGGGGTGGCACAAAATTATGCCGACCTATTTTACGAAGATACCT 3460 |||||||| |||| || ||| | || |||||| || ||| ||||||| ||||||| | Sbjct 28490 TTGATGAATTAAAGCAAGGGCTAGCCGAAAATTCGGCAGACTTATTTTATGAAGATATAT 28431 Query 3461 ACATTCATCCACAAAACAAACAATCTTATCGCCAAGTAATTATGAACCGTGACGGATTTA 3520 | ||||||| |||||||||||||||||||||||||| || ||||| || ||||| || | Sbjct 28430 ATGTTCATCCGCAAAACAAACAATCTTATCGCCAAGTTATCATGAATCGCGACGGCTTCA 28371 Query 3521 CATTATTAGCAATGGGATTCACAGGTCAAAAAGCTTTGCAATTTAAATTGAAATATATTG 3580 | |||||||||||||| ||||| |||||||| || ||||| || ||| |||||||||||| Sbjct 28370 CTTTATTAGCAATGGGGTTCACTGGTCAAAAGGCATTGCAGTTCAAACTGAAATATATTG 28311 Query 3581 AAGCTTTCAATCAAATGGAAAAAGAAATTCAACAGCCTAAACTTCCAACCTCGCAAAGAG 3640 | ||||| ||||||||||||||||||||||||||||| ||||| ||||| || |||||| Sbjct 28310 AGGCTTTTAATCAAATGGAAAAAGAAATTCAACAGCCCAAACTACCAACTTCCAAAAGAG 28251 Query 3641 AATTGGCGATGCTTGCTTTATCAGCAAATGAAGAAACAAATGAGCGTGTAGAT 3693 || | || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 28250 AACTAGCAATGCTTGCTTTATCAGCAAATGAAGAAACAAATGAGCGTGTAGAT 28198 Score = 291 bits (322), Expect = 2e-74 Identities = 193/214 (90%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 12090 CTCAACGAAAATCAGCAGATTGTGCTTGATTGGTTGAAAGAATCATGCAAATTATACGGA 12149 ||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||| Sbjct 20719 CTCAACGAAAATCAGCAGACTGTGCTGGATTGGTTGAAAGAATCATGCAAATTACACGGA 20660 Query 12150 TTACGTGAAGTTATTGAAATCATGGGATTTTTATCAACTACTGGTGGAAAAATGAAGTAT 12209 |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 20659 TTACGTGAAGTTATCGAAATTATGGGATTTTTATCAACTACTGGTGGAAAAATGAAGTAT 20600 Query 12210 AAGCAAGTAGCTTATGCATATGGTGACTTAAATGATGATGAATTGAAGCATGTCTTACAA 12269 |||||| ||||||||||||||| ||| |||||||| | |||||| || || ||||| Sbjct 20599 AAGCAAATAGCTTATGCATATGCTGATTTAAATGAGGTTGAATTAGCTCAAGTATTACAG 20540 Query 12270 GCGTTTAGCCGGTGGGCTATTGAACAGGAGGAAG 12303 |||||| ||| ||||||| | ||||||||||||| Sbjct 20539 GCGTTTGGCCAGTGGGCTTTGGAACAGGAGGAAG 20506 Score = 286 bits (316), Expect = 9e-73 Identities = 182/198 (92%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 11424 CAATCAACAGGGTTGAAAGACAAGAACGGCGTTGAAATTTTTGAGGGTGATGTATTATAT 11483 ||||| ||||| || ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 21066 CAATCCACAGGATTAAAAGATAAGAACGGCGTTGAAATTTTTGAGGGTGATGTATTATAT 21007 Query 11484 TATGATCCTTTCAAAACACATATGAATGATAGCATTGTTGTATTTGAAAAAGGTTCATTC 11543 || ||||||| || | ||||| ||||||||||| |||||||||||||||||||||||| Sbjct 21006 TACATTCCTTTCGAATCGCATATAAATGATAGCATCGTTGTATTTGAAAAAGGTTCATTC 20947 Query 11544 TGCaaaaaaaCGATAAGAAATGGAAAATTAACATCTGTTAGATTCATTGACAGCGAAGAA 11603 |||||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 20946 TGCAAAAAAATGTTAAGAAATGGAAAATTAACATCTGTTAAATTCATTGACAGCGAAGAA 20887 Query 11604 TATGAAGTTATCAGAAAT 11621 |||||||||||| ||||| Sbjct 20886 TATGAAGTTATCGGAAAT 20869 Score = 260 bits (288), Expect = 3e-65 Identities = 304/408 (75%), Gaps = 2/408 (0%) Strand=Plus/Minus Query 869 TAGCCAAGCGGTACTTTTCCACTAACAACTTCACCTTTTCGTATTTTATTATCGAAAACG 928 || |||| || || | ||| | || ||||| || |||| ||||| || || || || Sbjct 30731 TAACCAAAAGGAACGCTACCAGTTACCACTTCTCCCTTTCTAATTTTGTTTTCAAATACT 30672 Query 929 GCACGAATTCTTTCAGAAGTCATCTGTGCTTCAAGCTCAGCAAAACCCATTGATTGATTT 988 || || | |||||| | ||| |||||||| | |||||||||| |||||| ||||| Sbjct 30671 GCTTTGATACGTTCAGACGCCATTTGTGCTTCTAATTCAGCAAAACTCATTGACTGATTA 30612 Query 989 ACAAATGAACGGCCCATTGCTGTTTCTGTGTTAAAGAAAGGTTGTGTAACGGCTAACCAA 1048 ||||| ||||| || || || || || || || || ||||||| |||||| | ||| Sbjct 30611 ACAAAGGAACGTCCATAAGCAGTATCAGTATTGAAAAATGGTTGTGAAACGGCAAGCCAT 30552 Query 1049 GTAACATTGTTTTTGTCTAGTATTTCTTGAATATTTAAATAATGACGTAAATTTCTAAAC 1108 || || || |||| |||||||||||||||||| ||||||||||||||||||||| Sbjct 30551 GTTACGCCAGAATTATCTAATATTTCTTGAATATTTAAGTAATGACGTAAATTTCTAAAC 30492 Query 1109 CATCTATCTAATTTTGTAAATAAGATTGTATCGAtttt-tccttttttAACATCATCTAA 1167 |||| ||||||||| ||||| || || |||| ||| | | |||||||| ||| ||||| Sbjct 30491 CATCGATCTAATTTGGTAAACAAAATAATATCTATTCTGTTCTTTTTTAT-ATCTTCTAA 30433 Query 1168 TAATTTTTGAAATTCATCACGATATAGTTTCTGACCTGAAATGCCATCATCTATATAAGT 1227 ||| |||||||||||| || || | ||| || ||||||||||| ||||| ||||| || Sbjct 30432 TAAGCGTTGAAATTCATCGCGGTACAATTTTTGTCCTGAAATGCCGTCATCAATATACGT 30373 Query 1228 TTTGAATACTCTCATATTTCCTTGTTGTCTTACGTATTCATTTAAAGT 1275 | | | | ||| ||| |||| ||||| || || |||||||| Sbjct 30372 GTCAATGATTGTCAAATTGTCTTGAGTACTTACATAATCTTTTAAAGT 30325 Score = 190 bits (210), Expect = 5e-44 Identities = 210/274 (77%), Gaps = 12/274 (4%) Strand=Plus/Minus Query 14522 TACGTTCTCAATAAAATGAAGTGAGGTGAATAACCTC-CTCTTTTTTCTACAAGTTTGCA 14580 |||||||||||| || ||| || |||| | |||| |||||||||||||| |||| Sbjct 17611 TACGTTCTCAATTTAAAGAAATGGGGTGTAATTCCTCTCTCTTTTTTCTACAGATTTGTG 17552 Query 14581 AGGGACACTTTAATGGAATATAGCTCAGTTGGTAGAGCGTACGACTGTTAATC-GTAGGG 14639 || | ||||||| |||||| | | |||||||| | || || | || || Sbjct 17551 AGTG-----TTAATGGGGCATAGCTTAATCGGTAGAGCAGCGGTCTCCAAAACCGTTGGA 17497 Query 14640 TCATGAGTTCGAGTCTCGTTATTCCAGTAAGTAGCTATGCTACTTAAATaaaaaaaTCGT 14699 || ||||||||| || |||||| ||||| |||||||||||||||||||||| Sbjct 17496 --ATAGGTTCGAGTCCTATTGCCCCAGTAGGTAGCATAGCTACTTAAATAAAAAAATCGT 17439 Query 14700 CAATAAGTCAAATGTAACTACCTTTACGATCAGATGACGGTTAAGATTTTCCCTCCTATC 14759 ||||||||||||||||||||||||||||||| | |||| |||||||||||||||||||| Sbjct 17438 CAATAAGTCAAATGTAACTACCTTTACGATCGAACGACGATTAAGATTTTCCCTCCTATC 17379 Query 14760 TGAGACTGCACTTCTG--AGTGTGGTCttttttt 14791 |||||||||| | || |||| |||||| ||| Sbjct 17378 TGAGACTGCA-TAGTGAAAGTGCAGTCTTTATTT 17346 Score = 163 bits (180), Expect = 7e-36 Identities = 210/286 (73%), Gaps = 8/286 (3%) Strand=Plus/Minus Query 34794 GCATATTTTTC-TTTCATGAAGGATGATAGGAGAGAATCTACTGATGATTTTGAGATTAC 34852 ||||||||||| ||||| ||| ||| | ||||| |||| | || ||| | |||| Sbjct 916 GCATATTTTTCGTTTCAAAAAG-ATGGGAAAAGAGATACTACGGGAGACTTTAAAATTAT 858 Query 34853 GGTGTACGGGAATGCTGACATTGATGCAGAAGAAGCAAAAACTATAATTACTGAATACAA 34912 || | || ||||||||||||||||| | |||||| |||| || |||||||||||||| Sbjct 857 TGTTAAAGGAAATGCTGACATTGATGCCGGAGAAGCTGAAACAATTATTACTGAATACAA 798 Query 34913 CAAATTAGTTAAAGCTTTAAATGAAGCTTATCAATCTGCATTAGAAAAAATAGATACTGA 34972 ||| | || |||||||| |||||||| |||||| ||||| || | ||||| ||||||| Sbjct 797 TAAACTTGTAAAAGCTTTGAATGAAGCATATCAAGCTGCACTAAATAAAATGAATACTGA 738 Query 34973 TTACGATGCAGTTGTTAAGCGAATTGAAACAATAAAAACAGAGATGAATACATTACAAAC 35032 || | || |||| || || |||||| | || || ||| | ||||| || ||| Sbjct 737 CTATGCTGATGTTGAAAAACGTATTGAAGCGATCAAGGTAGATTTAAATACGCTAAAAAA 678 Query 35033 GCAAAT---TGATAAAACAGTAAGTGATGCAGAAGGCCGTATTTCA 35075 ||||| |||| | ||| ||||||||||| || |||||| Sbjct 677 ACAAATAACAGATATATTGGTA---GATGCAGAAGGTCGCATTTCA 635 Score = 93.3 bits (102), Expect = 1e-14 Identities = 72/86 (84%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 206 TCTTCTCTGTCTTTTTTATATTCCTCTAATGTTATAACCTCATTTAGATAAGCttttttt 265 |||| ||| ||||| |||||||| ||||| ||||||||||||| ||||| ||||||||| Sbjct 31394 TCTTTTCTATCTTTCTTATATTCGTCTAAACTTATAACCTCATTAAGATACGCTTTTTTT 31335 Query 266 agtctatctattttcttttttatttt 291 | | |||||||||||| |||||| Sbjct 31334 AACCGTTCTATTTTCTTTAGTATTTT 31309 >seq641 Length=27874 Score = 248 bits (274), Expect = 2e-61 Identities = 213/259 (82%), Gaps = 6/259 (2%) Strand=Plus/Minus Query 14540 AAGTGAGGTGAATAACCTCCTCTTTTTTCTACAAGTTTGCAAGGGACACTTTAATGGAAT 14599 ||||||||||||| ||||| | ||||||||| |||||| || | | ||||||||||| Sbjct 22580 AAGTGAGGTGAATTTCCTCCCTTATTTTCTACAGGTTTGCGAGTGTCCTTTTAATGGAAT 22521 Query 14600 ATAGCTCAGTTGG-TAGAGCGTACGACTGTTAATCGTAGGGTCATGAGTTCGAGTCTCGT 14658 ||||||||| || |||||| | || | ||| |||| ||||||||||||||||||| | Sbjct 22520 ATAGCTCAGCAGGATAGAGCATCCGCTTTCTAAGCGTACGGTCATGAGTTCGAGTCTCAT 22461 Query 14659 TATTCCAGTAAGTAGCTATGCTACTTAAATaaaaa--aaTCGTCAATAAGTCAAATGTAA 14716 |||||||||||||||| |||||||||||||||| |||||||||||| ||||||| Sbjct 22460 TATTCCAGTAAGTAGCATAGCTACTTAAATAAAAAATAATCGTCAATAA--ACAATGTAA 22403 Query 14717 CTACCTTTACGATCAGATGACGGTTAAGATTTTCCCTCCTATCTGAGACTGCAC-TTCTG 14775 ||||||||||||||| |||||||||||| |||||||||||| ||||||||| ||| Sbjct 22402 CTACCTTTACGATCAAATGACGGTTAAGGATTTCCCTCCTATTATAGACTGCACTTTCAC 22343 Query 14776 AGTGTGGTCtttttttCTT 14794 ||| ||||| |||| || Sbjct 22342 CGTGCAGTCTTCTTTTATT 22324 Score = 242 bits (268), Expect = 9e-60 Identities = 167/189 (88%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 13143 GGAAGAATAATAAATGATCAAATTTAAAGAATTCAATACTCAACCTTACGATGTTCACAT 13202 ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 23616 GGAGGATGAATAAATGATCAAATTTAAAGAATTCAATACTCAACCTTACGATGTTCAAAT 23557 Query 13203 TACTAGATTTTTTGAAGATTTAAACAGAAACAACCCAGATGGTGTTTTTGAATATGTTGA 13262 |||| ||||||||||||||||||| || ||||||||||| | ||||||||| |||||||| Sbjct 23556 TACTGGATTTTTTGAAGATTTAAATAGGAACAACCCAGACGATGTTTTTGAGTATGTTGA 23497 Query 13263 CTTGAAATGCGTTGATAGAAATTTAGTGATATTAGTTTACCGTCAAACTAATAGAAGCAT 13322 ||||||||| |||||||||| |||||||| ||||| || || |||||||||| | | || Sbjct 23496 CTTGAAATGTATTGATAGAAAATTAGTGATCTTAGTCTATCGCCAAACTAATAAAGGGAT 23437 Query 13323 ACGTCAGCT 13331 | |||||| Sbjct 23436 GCATCAGCT 23428 Score = 100 bits (110), Expect = 7e-17 Identities = 57/58 (98%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 10426 GAAAGGAGTGGAGGTTTGGTCGACCACAAAGAATTCTTTACTCCTTTGGAATGATGAA 10483 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 25982 GAAAGGAGTGGAGGTTTGGTCGACCACAAAGAATTCTTTACTCCTTTGAAATGATGAA 25925 >seq3605 Length=1427 Score = 241 bits (266), Expect = 3e-59 Identities = 195/236 (83%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 3299 AAATGAACAATTTAGTAATAATGAAAAATCACCAAGCAGTAACAAGTAGTTTACAAGTTG 3358 ||||| |||| |||||||| | |||| | || |||| ||||||||||||||||||| ||| Sbjct 236 AAATGGACAACTTAGTAATTACGAAAGACCAACAAGTAGTAACAAGTAGTTTACAAATTG 177 Query 3359 CTGAAGTTTTTGGCAAAGAACACAAAGTTGTTCTAAAAGCCATTGATGAAATAAAACAGG 3418 | ||| ||| ||| | || | |||| || ||| |||||||| ||||| ||| Sbjct 176 CCGAAACATTTAATAAAAACCATCGTGATGTTTTAGCAGCAATTGATGATTTAAAAGAGG 117 Query 3419 GGGTGGCACAAAATTATGCCGACCTATTTTACGAAGATACCTACATTCATCCACAAAACA 3478 |||| || ||||||| || |||||||||||||||||||||||||||||||||||||||| Sbjct 116 GGGTTGCGGAAAATTACGCAGACCTATTTTACGAAGATACCTACATTCATCCACAAAACA 57 Query 3479 AACAATCTTATCGCCAAGTAATTATGAACCGTGACGGATTTACATTATTAGCAATG 3534 |||||||||||||||||||||||||||| || ||||| || || || ||||||||| Sbjct 56 AACAATCTTATCGCCAAGTAATTATGAATCGCGACGGCTTCACTTTGTTAGCAATG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123915000311664