Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zeugodacus_20cucurbitae_20[refseq_20GCF_5F000806345.1_202014-12-23] 5,572 sequences; 374,820,345 total letters Query= NC_013648.1 Length=39576 Score E Sequences producing significant alignments: (Bits) Value seq273 1546 0.0 seq884 911 0.0 seq1321 810 0.0 seq5340 468 1e-127 seq3605 241 3e-59 seq641 109 1e-19 >seq273 Length=32108 Score = 1546 bits (1714), Expect = 0.0 Identities = 957/1030 (93%), Gaps = 1/1030 (0%) Strand=Plus/Minus Query 14178 GATGGTGAATAGATGAAACGCAACTGGAAAAGAGCAATAAATAAATTTAGCGGCATCGCA 14237 ||||||||||| ||||||||||| ||||||||| |||||||||| |||| ||||| ||| Sbjct 18875 GATGGTGAATAAATGAAACGCAATTGGAAAAGATTAATAAATAAAGTTAGTGGCATTGCA 18816 Query 14238 ATAATGATTCTTGTAGCAAAAGCAACCGTGAGCCATTTCGTGTATGGAAATTCCATAACA 14297 |||||||||||||||||||||||| |||||||| ||||||||||| | ||| ||||||| Sbjct 18815 ATAATGATTCTTGTAGCAAAAGCAGCCGTGAGCTATTTCGTGTATAGCAATGACATAACA 18756 Query 14298 AGCAGTGACCTCGTTTATTTCCTTTCATGCTCTTTTATTTTTGGATTAGGGCTATATTTA 14357 |||||||||||||||||||||||||||||||| |||||||| || ||||||||||||||| Sbjct 18755 AGCAGTGACCTCGTTTATTTCCTTTCATGCTCGTTTATTTTGGGGTTAGGGCTATATTTA 18696 Query 14358 GGAGGTTCCAGTGTATGAGTTATCCAGAAGTTTATATCTTAGGAAGGCAAGTCGATGGCG 14417 |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 18695 GGAGATTCAAGTGTATGAGTTATCCAGAAGTTTATATCTTAGGAAGGCAAGTCGATGGCG 18636 Query 14418 TTTATGTTGAGTATTCAGAGCCATATCTTTCaaaaaaaGAAGCTGAATTTGATAAGCATC 14477 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 18635 TTTATGTTGAGTATTCAGAACCATATCTTTCAAAAAAAGAAGCTGAATTTGATAAGCATC 18576 Query 14478 ACTATGAAATGGGCCAATTAATGTCACATGATGCTGGCTCTTGGAAAATTTTAAAGTATG 14537 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 18575 ACTATGAAATGGGCCAATCAATGTCACATGATGCTGGCTCTTGGAAAATTTTAAAGTATG 18516 Query 14538 GCAGACCAATTACACTGGAGGTGCAACATGGGTAAGAAAAAATCNNNNNNNNNNNNNNNN 14597 |||||||||||||||||||||||||||||||||||||||||||| Sbjct 18515 GCAGACCAATTACACTGGAGGTGCAACATGGGTAAGAAAAAATCAAAAATTAAAAAGAAA 18456 Query 14598 NAGCGTCGCTTGCAAGAAAAAGCAATTGCAAACGGCACTCAAAATTCTaaaaaataaaaa 14657 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 18455 AAGCGTCGCTTGCAAGAAAAGGCAATTGCAAACGGCACTCAAAATTCTAAAAAATAAAAA 18396 Query 14658 aaGTCGGAATCGCTCCGACCAACCACATTGATATTATAACATAAAAGGAGCGATTTAACT 14717 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 18395 AAGTCGGAATCGCTCCGACCAACCACATTGATATTATAACATAAAAGGAGCGATTTAACT 18336 Query 14718 TGATTCAATTGTTAAAAGAAGTTGATTTTAGTAAGACTAGAGCCAATGCGAGAGCCGTGT 14777 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct 18335 TGATTCAATTGTTAAAAGAAGTTGATTTCAGTCAGACTAGAGCCAATGCGAGAGCCGTGT 18276 Query 14778 TGAAAAATTTTAGACGTTTGGACCGAATAGCTGGTCGTTCCTTAGTAGATGTTCGGTCGC 14837 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 18275 TGAAAAATTTTAGACGTTTGGACCGAATAGCTGGTCGTTCCTTAGTAGATGTTCGGTCGC 18216 Query 14838 CAATCATTACAGACATGCCCAAAGGTATAACGCATGGCAACAAAGCAGAAGATGCGTTGA 14897 |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 18215 CAATAATTACAGACATGCCCAAAGGTATAAAGCATGGCAACAAAGCAGAAGATGCGTTGA 18156 Query 14898 TCCAGATGATTGATGTCGAAGTAGAGCGTGATGCAATCCTAACGGCTTTGATGTCACTAA 14957 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 18155 TCCAGATGATTGATGTCGAAGTAGAGCGTGATGCAATCCTAACGGCTTTGATGTCACTAA 18096 Query 14958 GCATAATAAGTCGTCAAATTCTTCACTACAGTTTCTGTGTGCAGGACCATTACTCTAATT 15017 |||| ||||||||||||||||||||||||||||| || |||||||||||||||||||||| Sbjct 18095 GCATTATAAGTCGTCAAATTCTTCACTACAGTTTTTGCGTGCAGGACCATTACTCTAATT 18036 Query 15018 ACAAGATTGCTAGAGAAGTTGGCTATTCCGAAAGAAGTATTCAACGCATGAAATCAGAAG 15077 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 18035 ACAAGATTGCTAGAGAAGTTGGCTATTCCGAAAGAAGTATTCAACGCATGAAATCAGAAG 17976 Query 15078 CTTTGATTGAATTTGCTGAAGCTTATCGAAATGGGAAAATAATTGCCTATAAATAAAATT 15137 ||||||||||||| || |||||||| || ||||| ||||||||||| ||||||| || || Sbjct 17975 CTTTGATTGAATTCGCAGAAGCTTACCGCAATGGCAAAATAATTGCATATAAAT-AATTT 17917 Query 15138 TTGGCGGTTTTTTGGCGGAAAGNNNNNNNTTTTTATACGAATTTGAGTGCTAATATAGTA 15197 |||||||||||||||||||||| ||||||| |||| || || ||| || Sbjct 17916 TTGGCGGTTTTTTGGCGGAAAGTTGGCGGTTTTTATCAATATTTAGTTGTTATTATGATA 17857 Query 15198 ATATCGAAAG 15207 | ||||||| Sbjct 17856 GTGTCGAAAG 17847 Score = 441 bits (488), Expect = 2e-119 Identities = 347/413 (84%), Gaps = 2/413 (0%) Strand=Plus/Minus Query 3281 AAAGGATGGCGAAAAACAAAATGAACAATTTAGTAATAATGAAAAATCACCAAGCAGTAA 3340 ||| || || || ||||| ||| ||||| |||||||||||||||| | |||| |||| Sbjct 28608 AAATGAAGG-GAGAAACAGAATATGCAATT-AGTAATAATGAAAAATAAACAAGTGGTAA 28551 Query 3341 CAAGTAGTTTACAAGTTGCTGAAGTTTTTGGCAAAGAACACAAAGTTGTTCTAAAAGCCA 3400 ||||||||||||||||||||||| ||| | ||| | || ||| |||| || |||||| Sbjct 28550 CAAGTAGTTTACAAGTTGCTGAAACATTTAGAAAACAGCATAAACATGTTTTAGAAGCCA 28491 Query 3401 TTGATGAAATAAAACAGGGGGTGGCACAAAATTATGCCGACCTATTTTACGAAGATACCT 3460 |||||||| |||| || ||| | || |||||| || ||| ||||||| ||||||| | Sbjct 28490 TTGATGAATTAAAGCAAGGGCTAGCCGAAAATTCGGCAGACTTATTTTATGAAGATATAT 28431 Query 3461 ACATTCATCCACAAAACAAACAATCTTATCGCCAAGTAATTATGAACCGTGACGGATTTA 3520 | ||||||| |||||||||||||||||||||||||| || ||||| || ||||| || | Sbjct 28430 ATGTTCATCCGCAAAACAAACAATCTTATCGCCAAGTTATCATGAATCGCGACGGCTTCA 28371 Query 3521 CATTATTAGCAATGGGATTCACAGGTCAAAAAGCTTTGCAATTTAAATTGAAATATATTG 3580 | |||||||||||||| ||||| |||||||| || ||||| || ||| |||||||||||| Sbjct 28370 CTTTATTAGCAATGGGGTTCACTGGTCAAAAGGCATTGCAGTTCAAACTGAAATATATTG 28311 Query 3581 AAGCTTTCAATCAAATGGAAAAAGAAATTCAACAGCCTAAACTTCCAACCTCGCAAAGAG 3640 | ||||| ||||||||||||||||||||||||||||| ||||| ||||| || |||||| Sbjct 28310 AGGCTTTTAATCAAATGGAAAAAGAAATTCAACAGCCCAAACTACCAACTTCCAAAAGAG 28251 Query 3641 AATTGGCGATGCTTGCTTTATCAGCAAATGAAGAAACAAATGAGCGTGTAGAT 3693 || | || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 28250 AACTAGCAATGCTTGCTTTATCAGCAAATGAAGAAACAAATGAGCGTGTAGAT 28198 Score = 419 bits (464), Expect = 6e-113 Identities = 281/311 (90%), Gaps = 8/311 (3%) Strand=Plus/Minus Query 17888 AAAAAGAGACAAGTGCGCTAACACTTGCCTCAATCCACAG-GATACGAATACCCCGAAGA 17946 |||||||||||||||||||||||||||||||||| || | ||||||||||||||||||| Sbjct 15732 AAAAAGAGACAAGTGCGCTAACACTTGCCTCAATTCAACGAGATACGAATACCCCGAAGA 15673 Query 17947 CACAGAAACCACACGCGCGTGCTTTTA----ACCCAGTTCTGTGTCTTTTAGCATTATAT 18002 |||||| | | | |||||| ||| |||| || ||||||||||||||||||| Sbjct 15672 CACAGAGAATTCCCACGCGTGGATTTTCGACACCC---TCCGTGTCTTTTAGCATTATAT 15616 Query 18003 AATAGTGCGAGGTATTCTACAATGGAAACATTTGATTATGAAGTTCAACAAGCTTTAGAA 18062 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 15615 AATAGTGCGAGGTATTCTACAATGGAAACATTTGATTATGAAGTTCAACAAGCTTTAGAA 15556 Query 18063 AAGCAAAAGATTGCAGAAGAAAACAACAAGATTATCAGGGCTGCAAAGGCTCAATGGATA 18122 ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 15555 AAGCAAAAGGTTGCGGAAGAAAACAACAAGATTATCAGGGCTGCAAAGGCTCAATGGATA 15496 Query 18123 AGCAACTTTAAAGCAGGTCAGATCAAATTAAATACAGTTAAAGATTTAAAAGATTTAATT 18182 ||||||||||||||||||||||| ||||| ||||||||||| || ||||||| |||||| Sbjct 15495 AGCAACTTTAAAGCAGGTCAGATTAAATTGAATACAGTTAAGGACCTAAAAGACTTAATT 15436 Query 18183 GAAATTGAGAG 18193 |||||||| || Sbjct 15435 GAAATTGAAAG 15425 Score = 288 bits (318), Expect = 3e-73 Identities = 192/214 (90%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 13313 CTCAGCGAAAGTCAGCAGATCGTGCTTGATTGGTTGAAAGAATCATGCAAATTAAACGGA 13372 |||| ||||| |||||||| ||||| ||||||||||||||||||||||||||| ||||| Sbjct 20719 CTCAACGAAAATCAGCAGACTGTGCTGGATTGGTTGAAAGAATCATGCAAATTACACGGA 20660 Query 13373 TTACGTGAAGTTATCGAAATTATGGGGTTTTTATCAACTACTGGTGGAAAAATGAAGTAT 13432 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 20659 TTACGTGAAGTTATCGAAATTATGGGATTTTTATCAACTACTGGTGGAAAAATGAAGTAT 20600 Query 13433 AAGCAAGTAGCTTATGCATATGGTGATTTAAATGATGATGAATTGAAGCATGTCTTACAA 13492 |||||| ||||||||||||||| |||||||||||| | |||||| || || ||||| Sbjct 20599 AAGCAAATAGCTTATGCATATGCTGATTTAAATGAGGTTGAATTAGCTCAAGTATTACAG 20540 Query 13493 GCGTTTAGCCGGTGGGCTGTTGAACAGGAGGAAG 13526 |||||| ||| ||||||| | ||||||||||||| Sbjct 20539 GCGTTTGGCCAGTGGGCTTTGGAACAGGAGGAAG 20506 Score = 260 bits (288), Expect = 3e-65 Identities = 304/408 (75%), Gaps = 2/408 (0%) Strand=Plus/Minus Query 869 TAGCCAAGCGGTACTTTTCCACTAACAACTTCACCTTTTCGTATTTTATTATCGAAAACG 928 || |||| || || | ||| | || ||||| || |||| ||||| || || || || Sbjct 30731 TAACCAAAAGGAACGCTACCAGTTACCACTTCTCCCTTTCTAATTTTGTTTTCAAATACT 30672 Query 929 GCACGAATTCTTTCAGAAGTCATCTGTGCTTCAAGCTCAGCAAAACCCATTGATTGATTT 988 || || | |||||| | ||| |||||||| | |||||||||| |||||| ||||| Sbjct 30671 GCTTTGATACGTTCAGACGCCATTTGTGCTTCTAATTCAGCAAAACTCATTGACTGATTA 30612 Query 989 ACAAATGAACGGCCCATTGCTGTTTCTGTGTTAAAGAAAGGTTGTGTAACGGCTAACCAA 1048 ||||| ||||| || || || || || || || || ||||||| |||||| | ||| Sbjct 30611 ACAAAGGAACGTCCATAAGCAGTATCAGTATTGAAAAATGGTTGTGAAACGGCAAGCCAT 30552 Query 1049 GTAACATTGTTTTTGTCTAGTATTTCTTGAATATTTAAATAATGACGTAAATTTCTAAAC 1108 || || || |||| |||||||||||||||||| ||||||||||||||||||||| Sbjct 30551 GTTACGCCAGAATTATCTAATATTTCTTGAATATTTAAGTAATGACGTAAATTTCTAAAC 30492 Query 1109 CATCTATCTAATTTTGTAAATAAGATTGTATCGAtttt-tccttttttAACATCATCTAA 1167 |||| ||||||||| ||||| || || |||| ||| | | |||||||| ||| ||||| Sbjct 30491 CATCGATCTAATTTGGTAAACAAAATAATATCTATTCTGTTCTTTTTTAT-ATCTTCTAA 30433 Query 1168 TAATTTTTGAAATTCATCACGATATAGTTTCTGACCTGAAATGCCATCATCTATATAAGT 1227 ||| |||||||||||| || || | ||| || ||||||||||| ||||| ||||| || Sbjct 30432 TAAGCGTTGAAATTCATCGCGGTACAATTTTTGTCCTGAAATGCCGTCATCAATATACGT 30373 Query 1228 TTTGAATACTCTCATATTTCCTTGTTGTCTTACGTATTCATTTAAAGT 1275 | | | | ||| ||| |||| ||||| || || |||||||| Sbjct 30372 GTCAATGATTGTCAAATTGTCTTGAGTACTTACATAATCTTTTAAAGT 30325 Score = 232 bits (256), Expect = 2e-56 Identities = 256/338 (76%), Gaps = 5/338 (1%) Strand=Plus/Minus Query 16312 AAGGAGCAAGAATATGCGTATTGAGAAAATGAAATTATCTGATTTAAAACCAGCCCCGTA 16371 |||||| || || |||| |||||| |||||||||||||| ||||||| || || || Sbjct 16860 AAGGAGTAAAAAAATGCATATTGAAAAAATGAAATTATCAGATTTAAGGCCGGCGGAATA 16801 Query 16372 TAATCCTAGAATTGAATTGAAACCAGGTATGACGGAATACGAAAA-CTTAAAAAACTCTC 16430 |||||| ||| | ||||||| ||||||||| | ||||| ||||| |||||| || || Sbjct 16800 TAATCCAAGAGTAAAATTGAATCCAGGTATGGCAGAATATGAAAAACTTAAACAA-TCAA 16742 Query 16431 TTTTAGAATTTGGTTTTGTTGACCCTCCTATTTTTAACCAACAAACAGGTTGTTTGGTAG 16490 ||||||||||||| |||||||| ||||| |||||||| || | ||||| ||||| | Sbjct 16741 TTTTAGAATTTGGCTTTGTTGATCCTCCCATTTTTAATAAAAATACAGGAAACTTGGTTG 16682 Query 16491 GTGGACATCAACGAGTTGCTGTTGCGATAGATTTAGG---ATTTAAAGAAGTTGAGACTT 16547 ||||||||||||| ||| ||||||| | ||| || || |||| | || | ||| || Sbjct 16681 GTGGACATCAACGCGTTACTGTTGCAAAAGAATTGGGGCTATTTGATGAGATAGAGGTTT 16622 Query 16548 CAATAGTTGATTTACCATTaaaaaaaGAAAAGATACTAAATATCGCTTTGAACAATCTTG 16607 | | |||||||||||||| | ||||| || | |||| || ||||| || || || Sbjct 16621 CTGTGGTTGATTTACCATTGGATAAAGAGAAAGTTCTAAGCATAGCTTTAAATAAGATTT 16562 Query 16608 AGGGTTCGTGGGATGAAGAAAAACTCACAGTATTGCTT 16645 || ||||||||||| ||||| |||| ||| ||| Sbjct 16561 CTGGAAATTGGGATGAAGATAAACTAACAGAATTACTT 16524 Score = 129 bits (142), Expect = 1e-25 Identities = 88/99 (89%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 15841 TCGTCAATAAGTCAAATGTAACTACCTTTACGATCAGATGACGGTTAAGATTTTCCCTCC 15900 ||||||||||||||||||||||||||||||||||| | |||| |||||||||||||||| Sbjct 17442 TCGTCAATAAGTCAAATGTAACTACCTTTACGATCGAACGACGATTAAGATTTTCCCTCC 17383 Query 15901 TATCATAGACTGCACAATAAAAGTGCAGTCTTTTTTATA 15939 |||| |||||||| | | |||||||||||||| || || Sbjct 17382 TATCTGAGACTGCATAGTGAAAGTGCAGTCTTTATTTTA 17344 Score = 93.3 bits (102), Expect = 1e-14 Identities = 72/86 (84%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 206 TCTTCTCTGTCTTTTTTATATTCCTCTAATGTTATAACCTCATTTAGATAAGCttttttt 265 |||| ||| ||||| |||||||| ||||| ||||||||||||| ||||| ||||||||| Sbjct 31394 TCTTTTCTATCTTTCTTATATTCGTCTAAACTTATAACCTCATTAAGATACGCTTTTTTT 31335 Query 266 agtctatctattttcttttttatttt 291 | | |||||||||||| |||||| Sbjct 31334 AACCGTTCTATTTTCTTTAGTATTTT 31309 >seq884 Length=19560 Score = 911 bits (1010), Expect = 0.0 Identities = 979/1291 (76%), Gaps = 8/1291 (1%) Strand=Plus/Plus Query 19286 GATATGCCAGTTTTTATTGATGATATATCAGGTGATGAATATGAGTAA---AAAATTATC 19342 || |||||||| ||| |||||||||| |||||||| ||| ||| |||| |||| Sbjct 7299 GAAATGCCAGTATTTGTTGATGATATC---GGTGATGATGATGGTTAAGAAAAAACTATC 7355 Query 19343 TGAATTTCTTCCTAAAGCATTTCATACTACTTGGAGGGTAGCATTAAACTCAAATATATT 19402 ||||| | || ||| ||||||| | ||||| | | | || || | ||| | Sbjct 7356 AGAATTATTACCGAAAAAATTTCATTCGGTATGGAGAGCCACTCTTAATTCGGACATACT 7415 Query 19403 ACATGTTGTTGAAAAAGGTGGCCGTGGGTCAGGTAAATCATCTGGCATAGCACACATAAT 19462 || ||||| || ||||| ||||| || ||||||||||| | || ||||| || || Sbjct 7416 CAATATTGTTTGTAAGGGTGGACGTGGTTCTGGTAAATCATCAGATATCGCACATATTAT 7475 Query 19463 CGTTCAATTGATTATGAGATATCCTGTAAATGCTGTGGCCATTAGATATGTTGATAATAC 19522 |||||| ||||||| ||| |||| ||||| || | |||| |||||||||||||||| Sbjct 7476 TACTCAATTACTTATGAGGTATGCTGTCAATGCGGTTGGCATTCGATATGTTGATAATAC 7535 Query 19523 GATTGAGCTATCTATTTTTGAACAGATTAAGTGGGCTATTGAAGAACAAGGTGTGTCTAA 19582 | || | ||| || | ||| || || || ||||| |||||| | ||||| || | | Sbjct 7536 ATTAGAACAATCAATCTATGAGCAAATGAAATGGGCAATTGAACAGCAAGGGGTAACGCA 7595 Query 19583 GTATTTTAAAGTAAATAAAAGTCCAATGAAAATCACTTATAAGCCTAGGGGTAATTATAT 19642 |||||| | |||||| || ||| |||||| || | ||| | ||||||||||| Sbjct 7596 TCTATTTAAATTTAATAAATCGCCGTTGAGAATCACATACATACCTCGTGGTAATTATAT 7655 Query 19643 TGTTTTTCGTGGCGCACAGAACCCAGAAAGGATTAAGTCCTTAAAGGATTCAAGATTTCC 19702 |||| | || || || || || ||||| || ||||| ||||| ||| | || || Sbjct 7656 GATTTTCAGAGGTGCCCAAAATCCTGAAAGAATCAAGTCTTTAAAAGATAGTCGGTTCCC 7715 Query 19703 ATTTGCTATAGCTTGGATTGAGGAATTAGCCGAGTTTAAAACAGAAGATGATGTAAAAAC 19762 ||||| || | ||||||||||| |||| |||||||||||| |||||||| |||| || Sbjct 7716 GTTTGCGATTGGCTGGATTGAGGAGTTAGGCGAGTTTAAAACTGAAGATGAAGTAACGAC 7775 Query 19763 CATTACCAATTCACTTTTACGTGGTGAATTAGCAGATGGTCTTTTTTATAAATTCTTTTA 19822 |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| Sbjct 7776 CATTACCAATTCACTTTTACGTGGTGAATTAGGAAATGGTCTTTTTTATAAATTCTTTTT 7835 Query 19823 TTCGTACAATCCTCCTAAGCGACGACAATCATGGGTTAATAAGAAATATGAATCTAGCTT 19882 ||||| || || || || |||||||| ||||| || ||||||||||||||||| || Sbjct 7836 CAGCTACAACCCGCCAAAACGTCGACAATCTTGGGTGAACAAGAAATATGAATCTAGTTT 7895 Query 19883 CCAACCTGAGAATACTTTCGTTCATCATTCAACATATAAGGATAATCCATTCATAGCTCA 19942 ||||||||| ||||| || |||||||| || || ||||| |||||||| || || | Sbjct 7896 CCAACCTGATAATACATTTGTTCATCACTCTACTTATAAAGATAATCCTTTTATTTCGAG 7955 Query 19943 AGCATTTATTGAAGAAGTTAATGCCACGAGAGCTAAGAATCCGAAACGTGCTGAGTGGGA 20002 || ||| | ||||||| | || | |||| || ||||| |||||| ||||| Sbjct 7956 AGAATTCTTGAAAGAAGTGGAGGCAGCAAGAGATAGAAATCCTTTTCGTGCTAGATGGGA 8015 Query 20003 GTATGACGGCAAAGCTATTGGTTCAGGAGTTGTTCCCGTTTGATAATTTACGAGTAATAA 20062 || || || |||| || ||||| ||||| ||| || || ||| ||| ||| | Sbjct 8016 ATACGATGGTGAAGCAATCGGTTCTGGAGTCGTT-CCATTCAGTAACTTAAAAGTGGAGA 8074 Query 20063 AAGGTTGTATAACTGATGAAATGGTAGCTAACTTTGATAATATCAGAAACGGTCTTGACT 20122 |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 8075 AAGGCTGTATAACTGATGAAATGGTTGCTAACTTTGATAATATCAGAAACGGTCTTGACT 8134 Query 20123 TCGGCTATGCTACTGATCCGTTAGCGTTCGTTCGATGGCATTATGATAAAAAGAAAAATG 20182 |||| |||||||||||||| ||||| ||||| |||||||| || ||||| || || |||| Sbjct 8135 TCGGTTATGCTACTGATCCATTAGCATTCGTACGATGGCACTACGATAAGAAAAAGAATG 8194 Query 20183 GTATCTATGCTATTGATGAGATATATGGTGTGAAAATTAGTAATAGGGAATTAGCTAAAA 20242 | ||||||||| ||||||| || ||||| |||||||| |||||| | || || || ||| Sbjct 8195 GCATCTATGCTGTTGATGAAATCTATGGAGTGAAAATCAGTAATCGTGAGTTTGCCCAAA 8254 Query 20243 AAGTAAAAGCAAAAGGATATGAAGCTGATAGGATTGGTGCAGATTCGGCTGAACCAAAAT 20302 | | ||||||||||| ||| | ||||| | |||| | ||||| || ||||| |||| Sbjct 8255 AGGCGAAAGCAAAAGGTTATCAGTCTGATCGTATTGCATCGGATTCAGCAGAACCTAAAT 8314 Query 20303 CGATAGCTGAGCTTATTAATGAGCATTCCATAAAGAAATTATATGGAGTGAAAAAGGGAC 20362 | ||||| || | | ||||| || || | | ||| ||| || ||||| || | Sbjct 8315 CCATAGCAGAATTGAACAATGAACACGGAATGAGCCACGTATTTGGGGTTAAAAAAGGCC 8374 Query 20363 CTGATTCAGTTGAATACGGGGAAGGATGGCTTGACGATCTAGACTTCATTTGTATAGACC 20422 | || || || | || || || | |||| | || ||| | || || |||||||| |||| Sbjct 8375 CCGACTCTGTGCAGTATGGCGAGGAATGGTTGGATGATTTGGATTTTATTTGTATCGACC 8434 Query 20423 CTTTGAGAACACCAAACATAGCACATGAATTTGAAAACATTGATTATCAAACTGATAAAG 20482 | | ||||| ||||| ||||| | || |||||||||||||||||||| || ||||||| Sbjct 8435 CACTAAGAACTCCAAATATAGCCAAAGAGTTTGAAAACATTGATTATCAGACGGATAAAG 8494 Query 20483 ATGGCAATCCTAAGCCAAGATTAGAAGATAAAGATAATCACACAATCGATGCTACGCGAT 20542 ||||||||||||||||||| | |||||||||||||| |||||||||||||| || ||| Sbjct 8495 ATGGCAATCCTAAGCCAAGGCTTGAAGATAAAGATAACCACACAATCGATGCAACAAGAT 8554 Query 20543 ATGCATTTAGCGATGATAT-GAGAAATATAA 20572 | || |||||||| || || |||||| |||| Sbjct 8555 ACGCTTTTAGCGAAGACATGGAGAAAAATAA 8585 Score = 360 bits (398), Expect = 5e-95 Identities = 232/254 (91%), Gaps = 0/254 (0%) Strand=Plus/Plus Query 14177 GGATGGTGAATAGATGAAACGCAACTGGAAAAGAGCAATAAATAAATTTAGCGGCATCGC 14236 ||| | | |||| |||||||||||||||||||||| ||||||||||||||| ||||| || Sbjct 5306 GGAGGATCAATAAATGAAACGCAACTGGAAAAGAGTAATAAATAAATTTAGTGGCATTGC 5365 Query 14237 AATAATGATTCTTGTAGCAAAAGCAACCGTGAGCCATTTCGTGTATGGAAATTCCATAAC 14296 ||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||||| Sbjct 5366 AATAATGATTCTTGTAGCAAAAGCAACCGTGAGTCATTTCGTGTGTGGAAATGACATAAC 5425 Query 14297 AAGCAGTGACCTCGTTTATTTCCTTTCATGCTCTTTTATTTTTGGATTAGGGCTATATTT 14356 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5426 AAGCAGTGATCTCGTTTATTTCCTTTCATGCTCTTTTATTTTTGGATTAGGGCTATATTT 5485 Query 14357 AGGAGGTTCCAGTGTATGAGTTATCCAGAAGTTTATATCTTAGGAAGGCAAGTCGATGGC 14416 |||||||||||| ||||||||||||||||| | ||||| | ||| | ||||| || ||| Sbjct 5486 AGGAGGTTCCAGCGTATGAGTTATCCAGAATTATATATACTGGGACGTCAAGTAGACGGC 5545 Query 14417 GTTTATGTTGAGTA 14430 |||||||||||||| Sbjct 5546 GTTTATGTTGAGTA 5559 Score = 298 bits (330), Expect = 1e-76 Identities = 173/178 (97%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 13481 CATGTCTTACAAGCGTTTAGCCGGTGGGCTGTTGAACAGGAGGAAGGATAATGGGAGAAA 13540 || ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct 3713 CAAGTCTTACAAGCGTTTAGCCGGTGGGCTATTGAATAGGAGGAAGGATAATGGGAGAAA 3772 Query 13541 TTGCAGAAATGATGTTGGAAGGTGTCTTATGTGCAAGTTGTGGTGTATTCCTTGATGTAT 13600 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 3773 TTGCAGAAATGATGTTGGAAGGTGTCTTATGTGCAGGTTGTGGTGTATTCCTTGATGTAT 3832 Query 13601 ATGGGAATGGGTATCCCGAATATTGCGAGGATTGCCAAGAACAAATAATCGAGGAGGA 13658 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 3833 ATGGGAATGGGTATCCCGAATATTGCGAGGATTGCCAAGAACAAATAATCGAGGAAGA 3890 Score = 87.8 bits (96), Expect = 5e-13 Identities = 54/58 (93%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 14121 ACAGAACAAGAAATAAAAGCAATTGACGAGCGCTATTGGCCGTTTGCTGTGAAGGTGG 14178 || ||||||||||| ||||| |||||||||||||||||||||||||||||||| |||| Sbjct 4806 ACTGAACAAGAAATCAAAGCGATTGACGAGCGCTATTGGCCGTTTGCTGTGAAAGTGG 4863 >seq1321 Length=4872 Score = 810 bits (898), Expect = 0.0 Identities = 955/1279 (75%), Gaps = 36/1279 (3%) Strand=Plus/Plus Query 37315 AAGGAGACAAATAAATGAAAAAGAAAATTTTAGCAGGAGCGCTTGTCGCTCTGTTTTTTA 37374 |||||| ||| |||||||||||||||||||| |||||| | ||||||| ||||||| Sbjct 1884 AAGGAGT-AAACGAATGAAAAAGAAAATTTTAGTTGGAGCGTTAATCGCTCTATTTTTTA 1942 Query 37375 TGCCTACTGCTGTATTTGCCGCAAAAGGTGACCAAGGCGTTGACTGGGCGATTTATCAAG 37434 ||||| ||||||||| || ||||| || ||||||||||| | | | |||| | | Sbjct 1943 TGCCTTTAAATGTATTTGCTGCTAAAGGCGATCAAGGCGTTGATTTGTCTATTTGGAATG 2002 Query 37435 GTGAACAAGGGCGTTTTGGTTATGCACATGATAAATTCGCTATCGCTCAAATTGGCGGCT 37494 | || |||| |||||||||||||||||||||||| | || | |||||||| || Sbjct 2003 GGGATCAAGCAACATTTGGTTATGCACATGATAAATTCTCAATTTCACAAATTGGTGGGC 2062 Query 37495 ACAATG-CTAGTGGTATTTACGATCAGTATACCTATAAAACTCAAGTAGCAAGTGCCATT 37553 | || ||| ||| ||||| ||||| ||| ||| | ||||||||| ||| | ||| Sbjct 2063 AAAACAACTA-TGGGATTTATGATCAAGTTACTTATTCTAGTCAAGTAGCTAGTACGATT 2121 Query 37554 GCTCAAGGAAAAAGAGCACATACTTATATTTGGTATGACACGTTCGGTAGCATGGATATT 37613 |||||||| ||| |||| ||||| ||| | |||| | | || || | || | | Sbjct 2122 GCTCAAGGTAAACGAGCGCATACGTATGTATGGTGGCAAAACGTCCTTACCTACGAAAAT 2181 Query 37614 GCCAAAATAACAATGGATTATTTCTTACCACGTATTCAAACACCAAAAAATTCTATTGTA 37673 || ||| | | | ||||| || ||||| ||||||||||||| || ||||| Sbjct 2182 GCAAAACAAGTATTAGATTACTTTTTACCTAAAGTTCAAACACCAAAGGGATCAATTGTC 2241 Query 37674 GCATTGGATTTTGAACATGGAGCT-AGTC--CTGATATAAACGCAAATACGGAAACAATC 37730 || || ||| ||| | || | | | || | ||| ||| ||| || || | Sbjct 2242 GCCTTAGATGCGGAAGACGGCGTTCAATCGACGGATGTAA-CGC---TATGGG------C 2291 Query 37731 TTGTATGGTATGCGACGGATTAAAGAGGCAGGTTACACGCCAATGTATTATAGCTACAA- 37789 | || ||| || |||||||| || || || || ||| ||| | ||||| Sbjct 2292 GT-TAGACTAT-------ATCAAAGAGGCTGGATATACACCGATGCTTTACGGATACAAA 2343 Query 37790 --GCCTTTTACGTTACAATACGTGGACTATCAGAAAATTATTAAAGAGTTTCCTAACTCT 37847 | | |||| | | || || ||||| || || || ||| || || Sbjct 2344 GGGTATCTTACTTCATCTTA--TGATTTATCACGAA-TTGCAAAGAAGTATC--AA---- 2394 Query 37848 TTATGGATTGCTGCCTATCCTAGCTATGAGGTAACGCCAGAACCACTGTATGCTTATTTC 37907 |||||||| || | ||||| ||||| || || || | ||| || |||||| Sbjct 2395 TTATGGATGGCAGAATATCCAGATTATGAAGTGACACCTTATCCAAATTACAATTATTTT 2454 Query 37908 CCAAGCATGGATGGTATCGCAATTTGGCAATTTACCTCCACTTATATTGCTGGTGGGTTA 37967 || | || ||||| |||| || || || || || || |||| || ||| || Sbjct 2455 CCTTCATTTGAAAATATCGGTATTTTTCAGTTCACGTCAACCTACGTTGCAGGAGGGCTA 2514 Query 37968 GATGGGAATGTTGATTTAACAGGTATTACTGATAATGGCTACACAGATACAGATAAGCCA 38027 ||||| || ||||||||||||||||||||||||||||| || ||| | | | | ||| Sbjct 2515 GATGGTAACGTTGATTTAACAGGTATTACTGATAATGGTTATACAAAGAATAACCAACCA 2574 Query 38028 GAGACGGACACACCAGCAACAGATGCAGGTAAAGAAACTGAAGATACGCCTAATACTGCA 38087 | || |||||||||||| |||||||| || || ||| ||||||| | | | | Sbjct 2575 GCAACAAACACACCAGCAATTGATGCAGGGGAAAAAGTCGAAAATACGCCAAGTTCCGAT 2634 Query 38088 GTAAAAGTCGGTGACACAGTTAAAGTGAAATTTAATGTTGATGCTTGGGCAACTGGCGAA 38147 || |||||||| || || |||||||||||||||| |||||||||||||| || || ||| Sbjct 2635 GTTAAAGTCGGCGATACTGTTAAAGTGAAATTTAGCGTTGATGCTTGGGCTACAGGTGAA 2694 Query 38148 GCTATTCCAGATTGGGTAAAAGGAAACAGCTACAAAGTGCAAGAAGTAACTGGAAGTAGA 38207 |||||||| | |||||||||||||||||||||||||||||||||| ||||| || ||| Sbjct 2695 GCTATTCCGCAATGGGTAAAAGGAAACAGCTACAAAGTGCAAGAAGCAACTGAGAGCAGA 2754 Query 38208 GTATTGCTAGAAGGCATTTTGTCGTGGATTAGCAAAGGGGATATTGAACTATTGCCAGAT 38267 |||||||| |||||||| ||||| ||||| |||||||| ||||||||| ||||||||||| Sbjct 2755 GTATTGCTTGAAGGCATCTTGTCATGGATCAGCAAAGGCGATATTGAATTATTGCCAGAT 2814 Query 38268 GCAACAGTCGTCCCTGATAAGCAACCAGAAGCAACTCATGTGGTACAATACGGTGAAACG 38327 || | || |||||||| |||||||||||||| || ||| ||||||| ||||||||| Sbjct 2815 GCGGTAACTGTTCCTGATAAACAACCAGAAGCAACACACGTGATACAATATGGTGAAACG 2874 Query 38328 TTATCCAGCATTGCTTATCAATATGGAACAGACTATCAAGCGTTGGCGGCATTAAATGGA 38387 ||||||||||||||||| ||| ||||||||||||||||| |||| || | |||||||| Sbjct 2875 TTATCCAGCATTGCTTACCAACATGGAACAGACTATCAAACGTTAGCTTCGCTAAATGGA 2934 Query 38388 TTGACAAATCCAAATCTAATCTATCCTGGTCAAGTTTTGAAAGTTAACGGATCAGCAGTA 38447 ||||||||||| ||| | || ||||||||||||||||||||||| || |||||||||||| Sbjct 2935 TTGACAAATCCTAATTTGATTTATCCTGGTCAAGTTTTGAAAGTCAATGGATCAGCAGTA 2994 Query 38448 AGCAATGTTTACACGGTTCAATACGGCGACAATTTATCAAGTATTGCAACCAAACTAGGC 38507 ||||| ||||| || || ||||| || || ||||||||||||||||| | ||||| ||| Sbjct 2995 AGCAACGTTTATACAGTCCAATATGGTGATAATTTATCAAGTATTGCGGCTAAACTTGGC 3054 Query 38508 ACGACATACCAAGCTCTAGCGCAACGGAACGGATTAGCAAATCCTAACTTAATTTATCCA 38567 ||||| || |||||| |||| |||||||||||||||| |||||||||||||||||||| Sbjct 3055 ACGACTTATCAAGCTTTAGCACAACGGAACGGATTAGATAATCCTAACTTAATTTATCCT 3114 Query 38568 GGGCAAACATTGAACTATT 38586 || |||||||||||||||| Sbjct 3115 GGTCAAACATTGAACTATT 3133 Score = 132 bits (146), Expect = 1e-26 Identities = 75/76 (99%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 38661 GGACCATTAGCTCAGTTGGTTAGAGCCAACCGCTCATAACGGTTAGGTCATAGGTTCGAG 38720 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 4366 GGACCATTAGCTCAGTTGGTTAGAGCCAACCGCTCATAACGGTTAGGTCACAGGTTCGAG 4425 Query 38721 TCCTGTATGGTCCATA 38736 |||||||||||||||| Sbjct 4426 TCCTGTATGGTCCATA 4441 >seq5340 Length=1013 Score = 468 bits (518), Expect = 1e-127 Identities = 432/546 (79%), Gaps = 32/546 (6%) Strand=Plus/Minus Query 3280 GAAAGGATGGCGAAAAACAAAATGAACAATTTAGTAATAATGAAAAATCACCAAGCAGTA 3339 ||||||| || ||||||||||||||||||||||||| |||||| | | ||||| ||| Sbjct 530 GAAAGGAAGG---AAAACAAAATGAACAATTTAGTAATTATGAAAGACAAACAAGCGGTA 474 Query 3340 ACAAGTAGTTTACAAGTTGCTGAAGTTTTTGGCAAAGAACACAAAGTTGTTCTAAAAGCC 3399 ||||||||| | |||||||||||||| || | || ||||||||| ||| || | || Sbjct 473 ACAAGTAGTCTGCAAGTTGCTGAAGTATTCGATAAGCAACACAAAGATGTATTAGAGGCA 414 Query 3400 ATTGATGAAATAAAACAGGGGGTGGCACAAAATTATGCCGA---------CCTATTTTAC 3450 |||||| | || || || || |||||| || | | | ||| Sbjct 413 ATTGATACGAAAATTCAATCGGCGG---AAAATTCCGCTCATTACCAAATCATGTTTGCT 357 Query 3451 GAAG----ATACCTACATTCATCC---ACAAAACAAACAATCTTATCGCCAAGTAATTAT 3503 || | |||| | ||||| | ||| |||| | | | | || || Sbjct 356 GAGGGAGAATACAAAGATTCAAGAGGTAGAAAGCAAAGATTGT--------ATTAC--AT 307 Query 3504 GAACCGTGACGGATTTACATTATTAGCAATGGGATTCACAGGTCAAAAAGCTTTGCAATT 3563 ||| ||||| || ||| | || | ||| | ||||||||||| ||||||| ||| Sbjct 306 GAATCGTGATGGCTTTTCTTTTATTGCATTTGGATTCACAGGCAAAAAAGCAGATACATT 247 Query 3564 TAAATTGAAATATATTGAAGCTTTCAATCAAATGGAAAAAGAAATTCAACAGCCTAAACT 3623 ||| ||||||||||||||||||| |||| |||||||||||||||||||||||||||||| Sbjct 246 CAAACTGAAATATATTGAAGCTTTTAATCTAATGGAAAAAGAAATTCAACAGCCTAAACT 187 Query 3624 TCCAACCTCGCAAAGAGAATTGGCGATGCTTGCTTTATCAGCAAATGAAGAAACAAATGA 3683 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 186 TCCAACCTCGCAAAGAGAATTGGCGATACTTGCTTTATCAGCAAATGAAGAAACAAATGA 127 Query 3684 GCGTGTAGATGTAATCGAAAAAGAAGTAGCCAACTTAAAAGACAATCAAAAAATCGGTGC 3743 ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| Sbjct 126 GCGTGTAGATGTAATAGAAAAAGAAGTAGCCGACTTAAAAGACAATCAAAAAATCGGTGC 67 Query 3744 AGATGATTATAGCTACTTATCACGTCGAGTTCATCAACGAGTAGCAGAAGTTGCAAGAGG 3803 |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| ||| Sbjct 66 AGATGATTATGGCTACTTATCACGCCGAGTTCATCAACGAGTAGCAGAAGTTGCAAAAGG 7 Query 3804 ATTTGG 3809 |||||| Sbjct 6 ATTTGG 1 >seq3605 Length=1427 Score = 241 bits (266), Expect = 3e-59 Identities = 195/236 (83%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 3299 AAATGAACAATTTAGTAATAATGAAAAATCACCAAGCAGTAACAAGTAGTTTACAAGTTG 3358 ||||| |||| |||||||| | |||| | || |||| ||||||||||||||||||| ||| Sbjct 236 AAATGGACAACTTAGTAATTACGAAAGACCAACAAGTAGTAACAAGTAGTTTACAAATTG 177 Query 3359 CTGAAGTTTTTGGCAAAGAACACAAAGTTGTTCTAAAAGCCATTGATGAAATAAAACAGG 3418 | ||| ||| ||| | || | |||| || ||| |||||||| ||||| ||| Sbjct 176 CCGAAACATTTAATAAAAACCATCGTGATGTTTTAGCAGCAATTGATGATTTAAAAGAGG 117 Query 3419 GGGTGGCACAAAATTATGCCGACCTATTTTACGAAGATACCTACATTCATCCACAAAACA 3478 |||| || ||||||| || |||||||||||||||||||||||||||||||||||||||| Sbjct 116 GGGTTGCGGAAAATTACGCAGACCTATTTTACGAAGATACCTACATTCATCCACAAAACA 57 Query 3479 AACAATCTTATCGCCAAGTAATTATGAACCGTGACGGATTTACATTATTAGCAATG 3534 |||||||||||||||||||||||||||| || ||||| || || || ||||||||| Sbjct 56 AACAATCTTATCGCCAAGTAATTATGAATCGCGACGGCTTCACTTTGTTAGCAATG 1 >seq641 Length=27874 Score = 109 bits (120), Expect = 1e-19 Identities = 85/99 (86%), Gaps = 3/99 (3%) Strand=Plus/Minus Query 15841 TCGTCAATAAGTCAAATGTAACTACCTTTACGATCAGATGACGGTTAAGATTTTCCCTCC 15900 |||||||||| |||||||||||||||||||||| |||||||||||| ||||||||| Sbjct 22421 TCGTCAATAAAC--AATGTAACTACCTTTACGATCAAATGACGGTTAAGGATTTCCCTCC 22364 Query 15901 TATCATAGACTGCACAATAAAAGTGCAGTCTT-TTTTAT 15938 ||| ||||||||||| | | |||||||||| |||||| Sbjct 22363 TATTATAGACTGCACTTTCACCGTGCAGTCTTCTTTTAT 22325 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126513228382032