Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zeugodacus_20cucurbitae_20[refseq_20GCF_5F000806345.1_202014-12-23] 5,572 sequences; 374,820,345 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq71 176 5e-39 >seq71 Length=1348405 Score = 176 bits (194), Expect = 5e-39 Identities = 463/695 (67%), Gaps = 25/695 (4%) Strand=Plus/Plus Query 105934 ATAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 105993 ||| || |||| ||||| |||||||| | |||||||| |||| ||||||||||| || Sbjct 495026 ATAAATATTCGAAGTGTACGGTTCAAACGACTCATTATTGCCCATAATTTGTGCGGTAGA 495085 Query 105994 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTC 106053 || |||||||| ||||| | ||| | ||| || | ||| | || ||| || || Sbjct 495086 AGCAGTTGGCATCGGTGCAAGCAACAATGAGTTGCGTACACCATGTTGCTTTATTTTCTC 495145 Query 106054 CTTGAGAACATCCCAGT--CGTAGTTGAGCTTG-GTTTCACCTTCCCACATATCAAATTG 106110 ||| | | ||||| | || | || | | |||| | |||||||| ||| |||| Sbjct 495146 CTTCAATTCGGTCCAGTTCCAGAGATCAGTTGGCGTTTTA---TCCCACATGTCATATTG 495202 Query 106111 AAGCAC-CCCTTGG-GACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCA 106168 || | |||||| ||| || ||||| ||| ||||||| || | || | |||| Sbjct 495203 TAGTATACCCTTGCTGACT--GGTGAACCTTCATATGTCTCGTAAGTGCCATATTTTTCA 495260 Query 106169 GCCAATTCACAGCTCGCCTCCAGGGATGCGTGATAC---ATGGTTTCAAAGATACGAGCA 106225 ||||||||||| || || |||| ||||| ||| || ||||| || || | | Sbjct 495261 GCCAATTCACAACTGGCTTCCA---ATGCGCCATAGTAAATAGTTTCGAATATTTGTTGA 495317 Query 106226 TTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCG 106285 |||| | | || ||||| || ||| | || ||||| || | || || Sbjct 495318 TTCAACAAGTATGCCTCATCACTTTCGTATGGAAAACGCATTAAAATTAAGGCGTCGGCA 495377 Query 106286 AGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA 106345 | |||||| | || | |||||| || | ||||||| ||| || |||| | | ||| Sbjct 495378 AAACCTTGTATGCCAATACCAATGGGACGATGTCGCAAATTCGA-TTTCTTG--GCCTCC 495434 Query 106346 ---ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTG 106402 | ||||||| ||| ||| |||| | ||| | ||| |||||||| |||||| Sbjct 495435 GGTAAGGGATAATGATTGACGTCTATGATTTTGTTCAAATTACGCGTAACAATTTTTGTG 495494 Query 106403 ATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGG 106462 | ||| | ||| || | | ||| | || | ||| |||||||| | | Sbjct 495495 ACTTCTTTAAGCCGTTTAAAGTCATACGTTTTA---TCTGGTGTGACATACATGTTCAAT 495551 Query 106463 GCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCT 106522 || ||||| || |||||||||||||| ||| || | | || || | |||||| Sbjct 495552 GCTATTGAGGCTAAATTGCAAACAGCTACCTCGTCGGGTGCGGAATATTCAACAATTTCG 495611 Query 106523 GTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCAC 106582 |||||||| || || |||||||| || | ||||| || ||||||||| | ||||| Sbjct 495612 GTACACAAATTACTACATTTAATCGTGCCAATATTCTGCTGATTACTCTTTCTATTGCAA 495671 Query 106583 GCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTC 106617 ||||| || || | |||||| || || || ||||| Sbjct 495672 GCATCTTTATACAACATGTACGGTGTGCCGGTCTC 495706 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589939707837280