Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zeugodacus_20cucurbitae_20[refseq_20GCF_5F000806345.1_202014-12-23] 5,572 sequences; 374,820,345 total letters Query= NC_018273.1 Length=26201 Score E Sequences producing significant alignments: (Bits) Value seq884 109 9e-20 >seq884 Length=19560 Score = 109 bits (120), Expect = 9e-20 Identities = 188/273 (69%), Gaps = 0/273 (0%) Strand=Plus/Plus Query 15542 AGCATTAAATGATGGTATCTTAGGTTTTGGTGGAACAACTGAACAGGTTACTAACTCAAT 15601 ||| |||||| |||||||| | || |||||||| | | || ||| || | || Sbjct 16864 AGCTTTAAATAATGGTATCCTCGGCTTTGGTGGGTCTGCAGAGATGGTAGACAATGCGAT 16923 Query 15602 TACCCAATTAAGTCAAGCATTCTCTAATGGTAAAATTGACGCTGAAACATGGAACTCGAT 15661 | ||| || ||| |||| || ||||||||| | || || |||| |||||||| || Sbjct 16924 CATCCAGCTATCACAATCATTTTCAAATGGTAAAGTAGATGCGCAAACTTGGAACTCAAT 16983 Query 15662 GATTGATAGTGGTTTGGGTCCGACTTTGAATGCTATGGCTAAACAAATGGGCATTACTAC 15721 |||| | ||||||||||| || || | || || | || ||||||||||| | ||| | Sbjct 16984 GATTAACAGTGGTTTGGGCCCAGCTCTAAACGCATTAGCGAAACAAATGGGGTTAACTGC 17043 Query 15722 TGGTGCTCTAAAGTCTGGCTTATCTGATGGTTCGATTTCAGTATCTCAATTTAATGACGC 15781 |||| | || || | ||||||||||| |||||||| ||||| | ||| | Sbjct 17044 TGGTCAGATGAAAGAAGGTCTCTCTGATGGTTCAATTTCAGTTGAAGAATTTCAAGACTC 17103 Query 15782 ACTTGTTAACCTTGATAAAAATGGTGGTGGGGG 15814 || |||| | ||||| | || ||||| || Sbjct 17104 TCTAATTAAATTGAATAAAGAAGGCGGTGGAGG 17136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 83719405925104