Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zeugodacus_20cucurbitae_20[refseq_20GCF_5F000806345.1_202014-12-23] 5,572 sequences; 374,820,345 total letters Query= NC_019486.1 Length=42606 Score E Sequences producing significant alignments: (Bits) Value seq1321 104 6e-18 >seq1321 Length=4872 Score = 104 bits (114), Expect = 6e-18 Identities = 123/166 (74%), Gaps = 2/166 (1%) Strand=Plus/Plus Query 23096 TGGCTCGCAGAGTATCCGAACTACAACGTTACACCGGAGCCAAATTACAACTATTTCCCG 23155 ||| | ||||| ||||| | || | || ||||| | ||||||||||| ||||| || Sbjct 2398 TGGATGGCAGAATATCCAGATTATGAAGTGACACCTTATCCAAATTACAATTATTTTCCT 2457 Query 23156 TCCTTTATCAACGTTCAGATGTTGCAGTTCACGTCAACCTACGTTGCTGGTGGGTTGGAC 23215 || ||| || | || || ||||||||||||||||||||||| || ||| | || Sbjct 2458 TCATTTGAAAATATCGGTATTTTTCAGTTCACGTCAACCTACGTTGCAGGAGGGCTAGAT 2517 Query 23216 GGCAACGTTGACTTTACTGGTATTACAGAAAACGG--ATACAAGGA 23259 || |||||||| || || |||||||| || || || |||||| || Sbjct 2518 GGTAACGTTGATTTAACAGGTATTACTGATAATGGTTATACAAAGA 2563 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 136208586821952