Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zeugodacus_20cucurbitae_20[refseq_20GCF_5F000806345.1_202014-12-23] 5,572 sequences; 374,820,345 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq71 118 2e-21 >seq71 Length=1348405 Score = 118 bits (130), Expect = 2e-21 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 221999 GGACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATC 222058 |||||||| || ||||| | | | ||| ||| | |||| || || ||||| ||| Sbjct 495843 GGACACATTAGCGACCAGTCTTCATCGGCTTCGACACGTCGCATAAATAGATCCGGTATC 495902 Query 222059 CACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGA 222118 |||| || | || | |||||| | || ||||| || ||| | |||||| ||| | Sbjct 495903 CACAAGGCATAGAATAAATCTCTTGCGCGATGCTCTTCTTTGCCAGTATTTTTCTTCAAA 495962 Query 222119 TCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGT 222178 ||||||||||| |||| ||| || ||||| || |||||||||| ||| | |||||||| Sbjct 495963 TCCAAAAACTCGAAAACGTCCGCATGCCATGGTTCCAGATAGATGGCAAAGGCGCCGGGA 496022 Query 222179 CGCTTGTTGCCACCCTGATCCAC 222201 ||||| |||||| ||||| || Sbjct 496023 CGCTTACCGCCACCTTGATCAAC 496045 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928780105959680