Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zeugodacus_20cucurbitae_20[refseq_20GCF_5F000806345.1_202014-12-23] 5,572 sequences; 374,820,345 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq63 84.2 3e-11 >seq63 Length=1519379 Score = 84.2 bits (92), Expect = 3e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 139260 AGTCCATCTGCACCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGT 139319 || || || | ||| ||||| | || || | |||||||||| ||||| || ||||| Sbjct 729184 AGACCTTCGGAACCGTGATAGACAGCGTACATAGCAGACATATTGGCGAGAAGGGCTTGA 729125 Query 139320 GCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGT 139379 || ||||| ||||| |||||||| ||||| | | ||||||||||| | ||||| | | Sbjct 729124 GCGGTGCAAATGTTGCTGGTTGCCTTGTCACGACGTATATGCTGCTCACGTGTTTGCAAT 729065 Query 139380 GCTAATCTGTATGC 139393 || || | ||| || Sbjct 729064 GCCAACCGGTAGGC 729051 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578958072761440