Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zeugodacus_20cucurbitae_20[refseq_20GCF_5F000806345.1_202014-12-23] 5,572 sequences; 374,820,345 total letters Query= NC_022613.1 Length=43686 Score E Sequences producing significant alignments: (Bits) Value seq66 96.9 1e-15 >seq66 Length=1219739 Score = 96.9 bits (106), Expect = 1e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 929 AGTGCCTACGATATTACTGTTCCGGCACATGGTAGAGCGGTGGTGCCTACCGATTTGATG 988 || || ||||| | | || ||||| | ||||| |||| | ||| ||||| ||| Sbjct 118400 AGCGCTTACGAAGTCAAAGTACCGGCGCGTGGTAAAGCGCTAGTGAAGACCGACTTGCAA 118459 Query 989 TTACACTTTCCGGAGGGTTGTTACGGTCGCATCGCGCCGCGCTCGGGATTAGCGACTAAG 1048 |||| || || ||||||| || || || || ||||| ||||| || | || |||| Sbjct 118460 GTACAATTGCCAGAGGGTTCGTATGGACGTATTGCGCCACGCTCTGGCCTCGCCGTTAAG 118519 Query 1049 TTCTTTATCGATGTTGGCGCAGGAGTTATAGATCCGGATTACCGGGGAAACGTTAGCGTT 1108 ||||||||||||||||| || || ||||| || ||||| |||||| | | ||| Sbjct 118520 AATTTTATCGATGTTGGCGCTGGCGTCGTAGATGAAGACTACCGCGGAAACTTGGGTGTT 118579 Query 1109 GTACTGTTTAA 1119 ||| ||||||| Sbjct 118580 GTATTGTTTAA 118590 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139664358147072