Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zeugodacus_20cucurbitae_20[refseq_20GCF_5F000806345.1_202014-12-23] 5,572 sequences; 374,820,345 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq48 104 2e-17 seq10 82.4 5e-11 >seq48 Length=1730007 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 |||||| || ||||| ||||| || | | |||| |||| |||| ||| ||||||||||| Sbjct 776863 CTCCTTTTGGATGTTGTAGTCGGACAAGGTGCGACCATCTTCCAATTGTTTTCCGGCGAA 776804 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||||| || || || ||| | || | ||||| ||||| | ||||| |||||| Sbjct 776803 GATCAAACGCTGTTGATCTGGTGGGATACCCTCTTTGTCTTGAATTTTAGCTTTGACATT 776744 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | | || | ||| | |||||| || | ||| |||||||| || || | || || || Sbjct 776743 TTCGATGGTGTCAGATGGCTCGACCTCTAAGGTGATGGTCTTACCAGTTAATGTTTTGAC 776684 Query 34966 AAAGATCTGCAT 34977 || |||||||| Sbjct 776683 GAAAATCTGCAT 776672 >seq10 Length=3877145 Score = 82.4 bits (90), Expect = 5e-11 Identities = 135/193 (70%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 ||||||||||| |||||||| || || |||| |||| |||| || || || ||||| Sbjct 2844780 TCCTTCTGAATATTATAGTCGGACAGTGTGCGTCCATCCTCCAACTGTTTGCCAGCGAAA 2844721 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 |||| ||||| || ||| | || | || ||||| || | ||||| |||||| || Sbjct 2844720 ATCAAACGTTGTTGATCTGGTGGGATTCCTTCCTTATCTTGAATTTTAGCTTTGAC--AT 2844663 Query 34907 GCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTA 34964 || || | || | ||| || || | || ||||| |||||||| | || || | Sbjct 2844662 TCTCAATAGTATCGGAAGGCTCAACCTCCAAAGTGATGGTTTTTCCCGTCAAAGTTTTGA 2844603 Query 34965 CAAAGATCTGCAT 34977 | || |||||||| Sbjct 2844602 CGAAAATCTGCAT 2844590 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325670682609068