Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zeugodacus_20cucurbitae_20[refseq_20GCF_5F000806345.1_202014-12-23] 5,572 sequences; 374,820,345 total letters Query= NC_022756.1 Length=40931 Score E Sequences producing significant alignments: (Bits) Value seq1481 89.7 1e-13 >seq1481 Length=7831 Score = 89.7 bits (98), Expect = 1e-13 Identities = 146/205 (71%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 20621 ATGGATTTGCTGGTATGCCTAATCATCAGCACGATCTGCTGTACATCAAAGTTGATCATG 20680 |||| ||||| ||| ||||||| ||| || || |||| || || || || ||| | | Sbjct 632 ATGGTTTTGCAGGTTATCCTAATCGTCAACATGACATGCTTTATATTAAGGTAGATAAAG 691 Query 20681 GTAGCGTTAAGTATCGTGTTCACACAG-TCAAGAGTGGTTGGCTGCCTTGGGTAACCAAA 20739 | | |||||||||||||| |||| |||| ||||| ||| | ||||||||| ||| Sbjct 692 GGGAAATGAAGTATCGTGTTCATACAGCTCAA-AGTGGCTGGTTAGCTTGGGTAAATAAA 750 Query 20740 GGTGATCGCAATGATACGGTCAACGGCTGT-GCCGGTAATGCTGGCGAAGTGATTGATGG 20798 || || |||||||| || || || ||| || |||| | || ||| |||||||| Sbjct 751 GGAAATAAAAATGATACAGTGAATGG-TGTAGCAGGTATTCAAGGACAAGCAATTGATGG 809 Query 20799 AGTCCAGATCATCTTTCTTACTCCT 20823 || ||| | | || | | |||||| Sbjct 810 TGTTCAGTTAAACTATATAACTCCT 834 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130848941479752